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Search of human proteins with 169205942
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
(564 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 1159 0.0
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 1159 0.0
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 715 0.0
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 65 2e-10
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 63 8e-10
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 58 2e-08
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 58 3e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 57 3e-08
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 57 4e-08
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 56 8e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 56 1e-07
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 55 1e-07
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 55 2e-07
gi|153792074 proline rich 12 [Homo sapiens] 54 3e-07
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 54 4e-07
gi|169213511 PREDICTED: hypothetical protein [Homo sapiens] 54 4e-07
gi|57864582 hornerin [Homo sapiens] 53 6e-07
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 53 6e-07
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 53 6e-07
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 53 8e-07
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 52 1e-06
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 51 2e-06
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 51 2e-06
gi|48762934 alpha 2 type I collagen [Homo sapiens] 51 3e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 4e-06
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 50 5e-06
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 50 5e-06
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 50 5e-06
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 50 7e-06
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 50 7e-06
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 1159 bits (2998), Expect = 0.0
Identities = 564/564 (100%), Positives = 564/564 (100%)
Query: 1 MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH 60
MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH
Sbjct: 1 MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH 60
Query: 61 TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC 120
TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC
Sbjct: 61 TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC 120
Query: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180
AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR
Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180
Query: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC
Sbjct: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
Query: 241 PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAA 300
PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAA
Sbjct: 241 PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAA 300
Query: 301 RASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA 360
RASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA
Sbjct: 301 RASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA 360
Query: 361 QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 420
QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR
Sbjct: 361 QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 420
Query: 421 GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGA 480
GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGA
Sbjct: 421 GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGA 480
Query: 481 GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR 540
GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR
Sbjct: 481 GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR 540
Query: 541 TQTLSLLRRCSGALRELESPFPDS 564
TQTLSLLRRCSGALRELESPFPDS
Sbjct: 541 TQTLSLLRRCSGALRELESPFPDS 564
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 1159 bits (2998), Expect = 0.0
Identities = 564/564 (100%), Positives = 564/564 (100%)
Query: 1 MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH 60
MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH
Sbjct: 1 MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH 60
Query: 61 TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC 120
TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC
Sbjct: 61 TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC 120
Query: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180
AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR
Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180
Query: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC
Sbjct: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
Query: 241 PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAA 300
PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAA
Sbjct: 241 PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAA 300
Query: 301 RASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA 360
RASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA
Sbjct: 301 RASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA 360
Query: 361 QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 420
QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR
Sbjct: 361 QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 420
Query: 421 GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGA 480
GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGA
Sbjct: 421 GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGA 480
Query: 481 GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR 540
GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR
Sbjct: 481 GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR 540
Query: 541 TQTLSLLRRCSGALRELESPFPDS 564
TQTLSLLRRCSGALRELESPFPDS
Sbjct: 541 TQTLSLLRRCSGALRELESPFPDS 564
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 715 bits (1846), Expect = 0.0
Identities = 397/567 (70%), Positives = 408/567 (71%), Gaps = 104/567 (18%)
Query: 1 MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH 60
MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH
Sbjct: 1 MEGKEKSFHHRGGTATVNVLPSLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNH 60
Query: 61 TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC 120
TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC
Sbjct: 61 TPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDC 120
Query: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180
AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGR SHSGPRAGTPGGGRSSRAGARR
Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRASHSGPRAGTPGGGRSSRAGARR 180
Query: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC
Sbjct: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRAC 240
Query: 241 PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGR--PTGERSSREPLLDPSK 298
PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHST G R PT R+ P K
Sbjct: 241 PGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHST-GARTLPTPSRAR------PGK 293
Query: 299 AARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALE 358
A + P AR+ R GGG T L G SGR
Sbjct: 294 PAPRGSAPPARL-------------RGGGGGSGLTQLVG---------------SGR--- 322
Query: 359 PAQGSELWARAERHGGSSGARTLPTPSRA-RPGKPAPRGSAPPARLRGGGGGSGLTQLVG 417
GS ++ T + A R G APR P LR
Sbjct: 323 ---------------GSGVTHSVGTHALATRRGSRAPR---PVGVLR------------- 351
Query: 418 SGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPR 477
GV H + A + R+P V F P S P++P
Sbjct: 352 -----GVPHFRPLSSPAPQSPPRSP-------SVRAFGPRLGAGRLSCPQAP-------- 391
Query: 478 LGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGV 537
RAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGV
Sbjct: 392 ------------RAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGV 439
Query: 538 PWRTQTLSLLRRCSGALRELESPFPDS 564
PWRTQTLSLLRRCSGALRELESPFPDS
Sbjct: 440 PWRTQTLSLLRRCSGALRELESPFPDS 466
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 65.1 bits (157), Expect = 2e-10
Identities = 105/431 (24%), Positives = 153/431 (35%), Gaps = 73/431 (16%)
Query: 109 RSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALR----------RPLTQWDASGGGGRG 158
R+ A PGL P P G+ P +ALR +PL + GG
Sbjct: 15 RTPAARAPGL----LTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 159 SHSGPRAG------TPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSW------ 206
S PRAG P GR RA + T R + R LG
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130
Query: 207 ----GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGH 262
G T P R+ +AGAR G PG+ P + + GT
Sbjct: 131 ETVARGKATEAPKRSAL-----SAGARRDTSG----PTPGTPSPAMARRSRAAGTEV--- 178
Query: 263 GGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQ 322
G+ R SA T G R + +S +PS AAR + + SL+++
Sbjct: 179 -GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 237
Query: 323 WRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLP 382
L R +G R ++ + P+ +AL P Q + A G + L
Sbjct: 238 TPLSSPARSGPSARGTPRAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 296
Query: 383 TPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAP 442
TPS + P P SAPP+ Q + S + + + + T + + +
Sbjct: 297 TPSPSAPPSP----SAPPS-----------LQTLPSPPATPPSQATTSLGSPTLQATHSF 341
Query: 443 RPVGVLRGVPHFRPLSSPAPQSPP-------RSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
P P PL++P PQ+PP ++P P L PQAP A A+
Sbjct: 342 LP------SPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVH 395
Query: 496 GI-AVLAPSPA 505
+ A +P P+
Sbjct: 396 LLQAPFSPPPS 406
Score = 40.8 bits (94), Expect = 0.003
Identities = 109/468 (23%), Positives = 155/468 (33%), Gaps = 100/468 (21%)
Query: 48 DRVPRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107
+ V RG T++ P R + S RR P+ RR+ A T +
Sbjct: 131 ETVARGKATEA----------PKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL 180
Query: 108 RRSRRAAGPGLDCAGSAPAPSGA--QSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA 165
R +A P G + S A S P+PA A RRP S GGG
Sbjct: 181 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA-ARRRP------SAGGGLQR------ 227
Query: 166 GTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGA 225
+SR+ + TPLS R G S R GTP P A
Sbjct: 228 ------PASRSLSSSATPLS---SPARSGPSAR-----------GTPRAP---------A 258
Query: 226 AGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTG 285
++ + +G + P T PP A +G + +PS+ + P+
Sbjct: 259 HPSQPKPKGLQALRPPQVT-PPRKDAAPALGPLSSSPLAT-----PSPSAPPSPSAPPSL 312
Query: 286 ERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLST 345
+ P PS+A + PT + H+ PS + + P L+
Sbjct: 313 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA---------LAL 363
Query: 346 AEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRG 405
+ P S A P S L + + + L P P P +PPA
Sbjct: 364 PPLQAPPSPPASPPL--SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS--- 418
Query: 406 GGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSP 465
S S +LA P P P P ++P PQ+P
Sbjct: 419 -----------PPVSPSATPPSQAPPSLAAPPLQVPPSP----PASPPMSPSATPPPQAP 463
Query: 466 P--RSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQ 511
P +P ++ P PQAP A A P + L PSP + GQ
Sbjct: 464 PPLAAPPLQLAKPP--------PQAPPALATPPLQAL-PSPPASFPGQ 502
Score = 35.4 bits (80), Expect = 0.14
Identities = 116/504 (23%), Positives = 150/504 (29%), Gaps = 44/504 (8%)
Query: 63 AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAG 122
AG + G RP+ S R P + +VS S T + A R R +AG GL
Sbjct: 174 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA----RRRPSAGGGLQRPA 229
Query: 123 SAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKT 182
S S A PA + R + A + G +A P R A
Sbjct: 230 SRSLSSSATPLSSPARSGPSARGTPR--APAHPSQPKPKGLQALRPPQVTPPRKDAAPAL 287
Query: 183 -PLSLCPLKLRKGSSRRCQGLGSSWGGSGTPP--PPRALWNRHGGAAGARAQVRGSEKRA 239
PLS PL S+ S +PP PP G
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPL 347
Query: 240 CPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDP--- 296
P +T PP + A + S ++ S + P P
Sbjct: 348 SPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP 407
Query: 297 ------SKAARASALPTARVAHASPPSLAAAQWRLGGGK-RKPTVLKGAVRTDLSTAEEE 349
S A P+A +PPSLAA ++ P + A +
Sbjct: 408 PVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 467
Query: 350 DPRSGRALEPAQGSELWARAERHGGSSGARTLP-----TPSRARPGKP--APRGSAPPAR 402
P A P Q A S + P +PS + P P P APP
Sbjct: 468 APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 527
Query: 403 LRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAP 462
+ L Q+ S S L R P P + G L+ P
Sbjct: 528 ------AAPLLQVPPSPPASPT--------LQAPRRPPTPGPDTSVSGPRLTLALAPGPP 573
Query: 463 QSPPRSPSVRAFGPRL---GAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGG 519
P RSPS GP L + S P+ R A SP D C
Sbjct: 574 PPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWS 633
Query: 520 SQPFAGRRAERGKRGAGVPWRTQT 543
P A A RG GA +PW T
Sbjct: 634 RGP-APPLAFRGAPGAPLPWPPAT 656
Score = 32.0 bits (71), Expect = 1.5
Identities = 66/262 (25%), Positives = 80/262 (30%), Gaps = 46/262 (17%)
Query: 111 RRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGG 170
RR PG D + S P + A + G P P S R P + G HS TP
Sbjct: 548 RRPPTPGPDTSVSGPRLTLALAPGPPPPPS--RSPSS---TLSGPDLAGHSSSATSTPEE 602
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARA 230
R +G GG+ PPP A AA +R
Sbjct: 603 LRGYDSGPE---------------------------GGAAASPPPDAELAACHPAAWSRG 635
Query: 231 QVRGSEKRACPGSTLP------PSSVLAGCVGTRARGHGGVQRQ--RFSAPSSHSTSGGR 282
R PG+ LP P S C G S TSGG+
Sbjct: 636 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 695
Query: 283 PT----GERSSREPLLDPSKAARASALPTARVAHASPPS--LAAAQWRLGGGKRKPTVLK 336
SSR P AL + V H + LAAA+ GG P +
Sbjct: 696 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 755
Query: 337 GAVRTDLSTAEEEDPRSGRALE 358
G T + A D GR E
Sbjct: 756 GGGVTGGARAALSDAELGRWAE 777
Score = 30.0 bits (66), Expect = 5.9
Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 436 RRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
+ G+ A P G+ RP SP P P ++R G GR P A RA +
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRK--PLAERAGGIG 66
Query: 496 GIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAER 530
G + P A G R S+P A R ER
Sbjct: 67 GATI--PESAPRAGPTRT------SRPPASGRGER 93
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 62.8 bits (151), Expect = 8e-10
Identities = 133/512 (25%), Positives = 165/512 (32%), Gaps = 92/512 (17%)
Query: 62 PAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCA 121
P GL P P P + GE SGP R A PG
Sbjct: 186 PRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGK--NGDDGEAGKPGRPGE 243
Query: 122 GSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA--GTPG-GGRSSRAGA 178
P P GA+ G A ++ G G +GP+ G+PG G + G
Sbjct: 244 RGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP 303
Query: 179 RRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKR 238
R GL G G P P A N GA GA
Sbjct: 304 R---------------------GLPGERGRPGAPGPAGARGN--DGATGAAGP------- 333
Query: 239 ACPGSTLPPSSV-LAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPS 297
PG T P G VG A+G G Q R S P G + P +P
Sbjct: 334 --PGPTGPAGPPGFPGAVG--AKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPG 389
Query: 298 KAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRAL 357
A P A+ A+ +P A + G R P+ +G P+
Sbjct: 390 ----ADGQPGAKGANGAPGIAGAPGF---PGARGPSGPQG-------PGGPPGPKGNSGE 435
Query: 358 EPAQGSELWARAERHGGSSGARTLPTPS-----RARPGKPAPRGSAPPARLRGGGGGSGL 412
A GS+ A+ G G + P P+ R G+P P G P RGG G G
Sbjct: 436 PGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGF 495
Query: 413 TQLVGSGRGSGVTHSVGTHALATRRGS--RAPRPVGVLRGVPHFRPLS----SPAPQ--- 463
G G G+ A +GS A RP G+P + L+ SP P
Sbjct: 496 PGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEA--GLPGAKGLTGSPGSPGPDGKT 553
Query: 464 ------------SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIA----VLAPSPAHD 507
PP P G R AG + P AA PG A V P A
Sbjct: 554 GPPGPAGQDGRPGPPGPP-----GARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVG 608
Query: 508 WGGQRCEGCGGGSQPFAGRRAERGKRG-AGVP 538
G+ E G AG ERG++G AG P
Sbjct: 609 PAGKDGEAGAQGPPGPAGPAGERGEQGPAGSP 640
Score = 52.8 bits (125), Expect = 8e-07
Identities = 113/456 (24%), Positives = 147/456 (32%), Gaps = 72/456 (15%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTR-RPRDAGEAAVSGPSRQRRTSRARTALWGRR 109
P G+ D + GPT G+ R P G A +GP A+
Sbjct: 774 PAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAG 833
Query: 110 SRRAAGPGLDCAGS----------APAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGS 159
++ AGP + AP GA+ GP A+ G GR
Sbjct: 834 AKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGF---------PGAAGRVG 884
Query: 160 HSGP--RAGTPG----GGRSSRAGARRKTPLSLCPLKL------RKGSSRRCQGLGSSWG 207
GP AG PG G+ G R +T + P ++ + G G
Sbjct: 885 PPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAG 944
Query: 208 GSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPG----STLPPSSVLAGCVGTRARGHG 263
GTP P R G G Q RG +R PG S P +G G R G
Sbjct: 945 APGTPGPQGIAGQR--GVVGLPGQ-RG--ERGFPGLPGPSGEPGKQGPSGASGERG-PPG 998
Query: 264 GVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQW 323
+ + P S G P E S P D S A+ T P A
Sbjct: 999 PMGPPGLAGPPGESGREGAPGAEGS---PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPG 1055
Query: 324 RLG-------GGKRKPTVLKGAVRT--DLSTAEEEDPRSGRALEPAQGSELWARAERHGG 374
+G G+ P G V A + PR + QG + H G
Sbjct: 1056 PVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDR---GIKGHRG 1112
Query: 375 SSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALA 434
SG + P P PG+ P G++ PA RG G +G G +G+ +G
Sbjct: 1113 FSGLQGPPGPP-GSPGEQGPSGASGPAGPRGPPGSAGAP---GKDGLNGLPGPIGPPGPR 1168
Query: 435 TRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPS 470
R G PVG P P P PP PS
Sbjct: 1169 GRTGDAG--PVG---------PPGPPGPPGPPGPPS 1193
Score = 52.0 bits (123), Expect = 1e-06
Identities = 123/492 (25%), Positives = 155/492 (31%), Gaps = 69/492 (14%)
Query: 81 PRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPAS 140
P + G GP+ R A A AGP P GA+ GP
Sbjct: 307 PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPP-----GFPGAVGAKGEAGPQGPR 361
Query: 141 ALRRPLTQWDASGGGGRGSHSGPRAGTPGG-GRSSRAGARRKTPLSLCPLKLRKGSSRRC 199
P G G +GP AG PG G+ GA ++ P
Sbjct: 362 GSEGPQGVRGEPGPPGPAGAAGP-AGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP 420
Query: 200 QGLGSSWGGSGTPPPPRALWNRHGGAAGARAQ-----VRGSE-------KRACPGSTLPP 247
QG G G G P A ++ G GA+ + V+G KR G P
Sbjct: 421 QGPGGPPGPKGNSGEPGAPGSK--GDTGAKGEPGPVGVQGPPGPAGEEGKRGARGE--PG 476
Query: 248 SSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGR-PTGERSSREPLL---DPSKAARA- 302
+ L G G R GG + F P + +G + P GER S P P +A R
Sbjct: 477 PTGLPGPPGER----GGPGSRGF--PGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPG 530
Query: 303 -SALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQ 361
+ LP A+ SP S GK P G D P R
Sbjct: 531 EAGLPGAKGLTGSPGSPGP------DGKTGPP---GPAGQD-GRPGPPGPPGARGQAGVM 580
Query: 362 GSELWARAERHGGSSGARTLPTPSRA-----------RPGKPAPRGSAPPARLRGGGGGS 410
G A G +G R +P P A G P P G A +G G
Sbjct: 581 GFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSP 640
Query: 411 GLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPS 470
G L G G G + G+ P RG P R + P + PR +
Sbjct: 641 GFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGAN 700
Query: 471 VRAFGPRLGAGRLSCPQAPRAAALPGI--------AVLAPSPAHDWGGQRCEGCGGGSQP 522
A G G P AP + PG+ A P P D G +G G
Sbjct: 701 -GAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGS--- 756
Query: 523 FAGRRAERGKRG 534
G+ RG G
Sbjct: 757 -PGKDGVRGLTG 767
Score = 45.1 bits (105), Expect = 2e-04
Identities = 109/453 (24%), Positives = 141/453 (31%), Gaps = 95/453 (20%)
Query: 68 GPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGP----------G 117
GP P+G+ P D GE+ SGP+ + AR A R GP G
Sbjct: 770 GPPGPAGA-----PGDKGESGPSGPAGP---TGARGAPGDRGEPGPPGPAGFAGPPGADG 821
Query: 118 LDCAGSAPAPSGAQSCGGP---APASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSS 174
A P +GA+ GP A + P+ A G G +GP T G +
Sbjct: 822 QPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAG 881
Query: 175 RAG-----ARRKTPLSLCPLKLRKGSSRRCQ-GLGSSWGGSGTPPPPRALWNRHGGAAGA 228
R G P P G R + G G G P PP G AG
Sbjct: 882 RVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPP--------GPAGE 933
Query: 229 RAQVRGSEKRACPGSTLPPSSV----LAGCVGTRA-RGHGGVQRQRFSAPSSHSTSGGRP 283
+ PG+ P + G G R RG G+ P SG
Sbjct: 934 KGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPS-GEPGKQGPSGA-- 990
Query: 284 TGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDL 343
+GER P+ PP LA G +GA +
Sbjct: 991 SGERGPPGPM--------------------GPPGLAGPPGESGR--------EGAPGAEG 1022
Query: 344 STAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARL 403
S + P A+ +R G +G P A PG P P G A +
Sbjct: 1023 SPGRDGSPG--------------AKGDR--GETGPAGPPGAPGA-PGAPGPVGPAGKSGD 1065
Query: 404 RGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQ 463
RG G +G VG G G G + R + RG + P
Sbjct: 1066 RGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQ-----GPP 1120
Query: 464 SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPG 496
PP SP + GP +G P +A PG
Sbjct: 1121 GPPGSPGEQ--GPSGASGPAGPRGPPGSAGAPG 1151
Score = 42.7 bits (99), Expect = 9e-04
Identities = 108/422 (25%), Positives = 135/422 (31%), Gaps = 41/422 (9%)
Query: 124 APAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPR--AGTPGGGRSSRAGARRK 181
AP PSGA+ G ++ P G G + G + AG PG S A +
Sbjct: 669 APGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQG 728
Query: 182 TPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNR-HGGAAGARAQVRGSEKRAC 240
P R GL G G P A + G G +
Sbjct: 729 MP-----------GERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGA 777
Query: 241 PGSTLPPSSVLAGCVG-TRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKA 299
PG S +G G T ARG G R P +G P G +P A
Sbjct: 778 PGDK--GESGPSGPAGPTGARGAPG-DRGEPGPPGPAGFAG--PPGADGQPGAKGEPGDA 832
Query: 300 -ARASALPTARVAHASPPSLAAAQWRLGG-GKRKPTVLKGAVRTDLSTAEEEDPR-SGRA 356
A+ A P A PP G G R GA + P SG A
Sbjct: 833 GAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNA 892
Query: 357 LEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLV 416
P A + GG G R P+ RPG+ P G PA +G G G
Sbjct: 893 GPPGPPGP----AGKEGGK-GPRGETGPA-GRPGEVGPPGPPGPAGEKGSPGADGPAGAP 946
Query: 417 GSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGP 476
G+ G+ G L +RG R G+P P P Q P + R
Sbjct: 947 GTPGPQGIAGQRGVVGLPGQRGERG------FPGLP--GPSGEPGKQGPSGASGERGPPG 998
Query: 477 RLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAG 536
+G L+ P P + G SP D G +G G + P AG G GA
Sbjct: 999 PMGPPGLAGP--PGESGREGAPGAEGSPGRD-GSPGAKGDRGETGP-AGPPGAPGAPGAP 1054
Query: 537 VP 538
P
Sbjct: 1055 GP 1056
Score = 41.6 bits (96), Expect = 0.002
Identities = 90/336 (26%), Positives = 109/336 (32%), Gaps = 34/336 (10%)
Query: 201 GLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRAR 260
GL G G P PP G A G ++++ G ++P +G G
Sbjct: 139 GLPGPPGPPGPPGPPGL------GGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGP 192
Query: 261 GHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAAR-ASALPTARVAHASPPSLA 319
G Q F P G +G R P P K A R PP
Sbjct: 193 P-GAPGPQGFQGPPGEPGEPGA-SGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQ 250
Query: 320 AAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGAR 379
A+ L G P + + L A+ + +G EP E A G G R
Sbjct: 251 GARG-LPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAP-----GQMGPR 304
Query: 380 TLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGS 439
LP R RPG P P G+ G G G T G G + G RGS
Sbjct: 305 GLPG-ERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGS 363
Query: 440 RAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAV 499
P+ V RG P P P A GP G P A A PGIA
Sbjct: 364 EGPQGV---RG--------EPGPPGP-----AGAAGPAGNPGADGQPGAKGANGAPGIAG 407
Query: 500 LAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGA 535
AP G +G GG P G E G G+
Sbjct: 408 -APGFPGARGPSGPQGPGGPPGP-KGNSGEPGAPGS 441
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 58.2 bits (139), Expect = 2e-08
Identities = 130/507 (25%), Positives = 164/507 (32%), Gaps = 75/507 (14%)
Query: 65 LDCG-PTRPSGS---LTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRR--AAGPGL 118
LDC P P G + ++ P G Q+ + G R R A PG
Sbjct: 80 LDCADPVTPPGECCPVCSQTPGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPAGPPGS 139
Query: 119 DCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGA 178
P G GP Q A G G SH GP G + AG
Sbjct: 140 QGPRGERGPKGRPGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPD-GLSRPFSAQMAGL 198
Query: 179 RRKTPLS----LCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHG----GAAGARA 230
K+ L L P + R QGL GG+G PP + G+ G
Sbjct: 199 DEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEG 258
Query: 231 QVRGSEKRACPGSTLPPSSV-LAGCVGTRA-------------RGHGGVQ--RQRFSAPS 274
+ PG P V AG G R RGH G++ + AP
Sbjct: 259 PPGKPGEDGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPG 318
Query: 275 SHSTSGGRPTGERSSREPLLD---PSKAARAS--ALPTARVAHASP-----------PSL 318
S +G PTG + PL P + R P R AH P P
Sbjct: 319 SKGEAG--PTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGS 376
Query: 319 AAAQWRLG-GGKRKPTVLKGAVRTDLSTAEEEDPR--SGRALEPAQGSELWARAERHGGS 375
+ G G+ PT +G E P L A G++ A+ GS
Sbjct: 377 SGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGS 436
Query: 376 SGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSG--RGS----GVTHSVG 429
G P S PG P P+GS P +RG G G+ G +G G+ +G
Sbjct: 437 PGTSG-PPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIG 495
Query: 430 THALATRRGSRA-------PRPVGVL-----RGVPHFRPLSSPAPQSPPRSPSVRAFGPR 477
+RG R P PVG RG P L P R P V + GP+
Sbjct: 496 PPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGP-VGSSGPK 554
Query: 478 LGAGRLSCPQAPRAAALPGIAVLAPSP 504
G P P LPG L +P
Sbjct: 555 ---GSQGDPGRPGEPGLPGARGLTGNP 578
Score = 42.0 bits (97), Expect = 0.001
Identities = 107/438 (24%), Positives = 133/438 (30%), Gaps = 66/438 (15%)
Query: 53 GSVTDSNHTPAGLDCGPTRPSGSLTTR----RPRDAGEAAVSGP-----SRQRRTSRART 103
GS ++ T A GP P G + P G+A GP S
Sbjct: 834 GSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVP 893
Query: 104 ALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHS-- 161
L G R + GSA G P PA L P + G GSH
Sbjct: 894 GLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRV 953
Query: 162 ---GPRAGTPGG-GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRA 217
GP AG PGG G G + P R G+ G G P P
Sbjct: 954 GDRGP-AGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGP 1012
Query: 218 LWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHS 277
G G + + PG PP S +G V P+ +
Sbjct: 1013 -----AGTPGKVGPTGATGDKGPPGPVGPPGS------------NGPVGEPGPEGPAGND 1055
Query: 278 TSGGRP--TGERSSREPLLDPSKAARASALPTARVAHASPPSLAA---AQWRLGGGKRKP 332
+ GR GER R DP A LP ++ A +P + A A R G R P
Sbjct: 1056 GTPGRDGAVGERGDRG---DPGPAG----LPGSQGAPGTPGPVGAPGDAGQRGDPGSRGP 1108
Query: 333 TVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKP 392
G + PR + +G + H G +G + LP P P
Sbjct: 1109 IGPPGRAGKR-GLPGPQGPRGDKGDHGDRGDR---GQKGHRGFTGLQGLPGP-------P 1157
Query: 393 APRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPR-PVGVLRGV 451
P G A + G G G VG G +G RGS P G
Sbjct: 1158 GPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEG----- 1212
Query: 452 PHFRPLSSPAPQSPPRSP 469
P P P PP P
Sbjct: 1213 ----PPGEPGPPGPPGPP 1226
Score = 40.0 bits (92), Expect = 0.006
Identities = 123/503 (24%), Positives = 151/503 (30%), Gaps = 91/503 (18%)
Query: 81 PRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGG-PAPA 139
P GEA +GP R + G R R GP AP GA G P P
Sbjct: 317 PGSKGEAGPTGPMGAMGPLGPR-GMPGERGR--LGPQ-----GAPGQRGAHGMPGKPGPM 368
Query: 140 SALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRC 199
L P + G +G A P G + R P+
Sbjct: 369 GPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVG-------------S 415
Query: 200 QGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSV----LAGCV 255
GL + G GTP GA+ PGS PP S G
Sbjct: 416 PGLPGAIGTDGTP--------------GAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQ 461
Query: 256 GTRAR-GHGGVQRQRFSA-----PSSHSTSGG-RPTGERSSREPLLDPSKAARASALPTA 308
G R + G GV + A P H G P GE R P DP P
Sbjct: 462 GIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVG-----PPG 516
Query: 309 RVAHASPPSLAAAQWRLG-GGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWA 367
V P G G + +G V + + DP GR EP
Sbjct: 517 PVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDP--GRPGEPGLPGARGL 574
Query: 368 RAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSG-------- 419
+ P + G+P P GS +RG G GL GS
Sbjct: 575 TGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIG---IRGQPGSMGLPGPKGSSGDPGKPGE 631
Query: 420 ---------RGS-------GVTHSVGTHALATRRGSRAPRPVGVLRGVP----HFRPLSS 459
RG+ G + VG LA RG + P +G+P
Sbjct: 632 AGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGK 691
Query: 460 PAPQSPPRSP-SVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDW--GGQRCEGC 516
P Q P P +V GPR G P LPG +A D G G
Sbjct: 692 PGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGT 751
Query: 517 GGGSQPFAGRRAERGKRG-AGVP 538
G + P G + G+RG AG P
Sbjct: 752 PGDTGP-PGLQGMPGERGIAGTP 773
Score = 39.3 bits (90), Expect = 0.010
Identities = 115/460 (25%), Positives = 147/460 (31%), Gaps = 72/460 (15%)
Query: 68 GPTRPSGSL-TTRRPRDAGEAAVSGPSRQRR---TSRARTALWGRRSRRAAGP-GLDCAG 122
GP P GS + P D G + G +R T + G + A G G D A
Sbjct: 738 GPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGAR 797
Query: 123 SAPAPSGAQSCGGPA-------PASALRRPLTQWDASGGGGRG-----SHSGPRA--GTP 168
P P G GP P + P ++ + G G +GP+ G P
Sbjct: 798 GLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQP 857
Query: 169 G-----GGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHG 223
G G + A P L G + G+ GG GT PP A
Sbjct: 858 GVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPN----GVPGLKGGRGTQGPPGAT----- 908
Query: 224 GAAGARAQVRGSEKRACPGSTLPPSSV-LAGCVGTRAR--GHGGVQRQRFSAPSSHSTSG 280
G G+ +V PG P G G R HG V + + P
Sbjct: 909 GFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDK 968
Query: 281 GRPTGERSSREPLLDPSKAARAS-----ALPTARVAHASP--PSLAAAQWRLG-----GG 328
G P GE P P A +P R P P A ++G G
Sbjct: 969 GDP-GEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGD 1027
Query: 329 KRKPTVLKGAVRTDLSTAEEEDPR----SGRALEPAQGSELWARAERHGGSSGARTLPTP 384
K P G V S +P +G P + + R +R G G LP
Sbjct: 1028 KGPP----GPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDR--GDPGPAGLPG- 1080
Query: 385 SRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSG--RG----SGVTHSVGTHALATRRG 438
S+ PG P P G+ A RG G G G RG G G H RG
Sbjct: 1081 SQGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRG 1140
Query: 439 SRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRA-FGPR 477
+ R L+G+P P P S + FGPR
Sbjct: 1141 QKGHRGFTGLQGLP-----GPPGPNGEQGSAGIPGPFGPR 1175
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 57.8 bits (138), Expect = 3e-08
Identities = 101/443 (22%), Positives = 160/443 (36%), Gaps = 88/443 (19%)
Query: 69 PTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPS 128
P R SG +R P G + P+R+ R SR+RT RRS R+ PA
Sbjct: 640 PARRSGRSRSRTPARRGRSRSRTPARRGR-SRSRTP--ARRSGRS-------RSRTPARR 689
Query: 129 GAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGG----RSSRAGARRKTPL 184
G P + R L + G S + R G G SR RR
Sbjct: 690 GRSRSRTPRRGRSRSRSLVR-----RGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSN 744
Query: 185 SLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGST 244
S +K + SSRR + L S PR ++A+ R S +R+ GS+
Sbjct: 745 SSPEMKKSRISSRRSRSLSS----------PR-----------SKAKSRLSLRRSLSGSS 783
Query: 245 LPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASA 304
P + R+R + + P S S P ++ S+ PS+ + +S+
Sbjct: 784 -PCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSK----TPSRQSHSSS 838
Query: 305 LPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSE 364
P +V +PP +G++ + + + P+ E + E
Sbjct: 839 SPHPKVKSGTPPR------------------QGSITSPQANEQSVTPQRRSCFESSPDPE 880
Query: 365 LWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGV 424
L +R SG+ S P + R S+P +++ + ++ S GS
Sbjct: 881 LKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVK-----AIISPRQRSHSGSSS 935
Query: 425 THSVGTHALATRRGSRAPRPVGVL--RGVPHF------RPLSSPAPQSPPRS-------- 468
+ T R SR+ P + R +P + P + P++PPR
Sbjct: 936 PSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISP 995
Query: 469 -PSVRAF---GPRLGAGRLSCPQ 487
P V+A GP L + CPQ
Sbjct: 996 YPKVKAQTPPGPSLSGSKSPCPQ 1018
Score = 55.8 bits (133), Expect = 1e-07
Identities = 118/477 (24%), Positives = 167/477 (35%), Gaps = 63/477 (13%)
Query: 36 PEFPQIARNDCWDRVPRGSVTDSNHTPAGLDCGPTRP---SGSLTTRRPRDAGEAAVSGP 92
P P R++C D P TP P+ P + LT +R R E++V
Sbjct: 1470 PRTPSRGRSEC-DSSPEPKALPQ--TPRPRSRSPSSPELNNKCLTPQRERSGSESSVD-- 1524
Query: 93 SRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDAS 152
+ + ART L G+RSR + LD SA ++S P + R PL Q S
Sbjct: 1525 ----QKTVARTPL-GQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRS 1579
Query: 153 GG----------GGRGSHSG--------PRAGTPG-GGRSSRAGARRKTPLSLCPLKLRK 193
G R S SG PRA G S + P +L P + R
Sbjct: 1580 GSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRAL-PRRSRS 1638
Query: 194 GSSRRCQG---LGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSV 250
GSS + +G GSS S PP++ R G + + + S P
Sbjct: 1639 GSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELT 1698
Query: 251 LAGCVGTRARGHGGVQRQRFSAPSSH--STSGGRPTGERSSREPLLDPSKAARASALP-- 306
+ R+R R P H S S P SR S+ R+++ P
Sbjct: 1699 RKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRS-----SRRRRSASSPRT 1753
Query: 307 --TARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSE 364
T+R + P Q +R+ T + R D S + + + R + ++
Sbjct: 1754 KTTSRRGRSPSPKPRGLQRSRSRSRREKT--RTTRRRDRSGSSQS---TSRRRQRSRSRS 1808
Query: 365 LWARAERHGGSSGARTLPTPSRARPGKPAPRG---SAPPARLRGGGGGSGLTQLVGSGRG 421
R R G +R+ +R RG + P +R R S R
Sbjct: 1809 RVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRA 1868
Query: 422 SGVTH--SVGTHALATRRGSRA-PRPVGVLR-----GVPHFRPLSSPAPQSPPRSPS 470
S TH S L +RR SR+ PV R V R S +P S RS S
Sbjct: 1869 SPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRS 1925
Score = 45.4 bits (106), Expect = 1e-04
Identities = 115/470 (24%), Positives = 160/470 (34%), Gaps = 55/470 (11%)
Query: 93 SRQRRTSRARTALWGRRSRRA-AGPGLDCAGSAPAP-SGAQSCGGPAPASAL--RRPLTQ 148
S+ ++ R+R+ +SRRA D A S+ S ++S +AL R P
Sbjct: 240 SKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSP- 298
Query: 149 WDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPL------KLRKGSSRRCQGL 202
ASG G G GT R S K P S P K K ++R
Sbjct: 299 --ASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSS--PYEDKDKDKKEKSATRPSPSP 354
Query: 203 GSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGH 262
S G P P L RHGG+ A S++ P S P TR R
Sbjct: 355 ERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASP---------TRDRS- 404
Query: 263 GGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQ 322
++ SS +S P + SR P A A + R +SP S +
Sbjct: 405 PPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSH 464
Query: 323 WRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEP--AQGSELWARAERHGGSSGART 380
G + D S + R GR+ P A+ +R G S +R+
Sbjct: 465 --------------GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRS 510
Query: 381 LPTPSRARPGKPAPRGSAPPAR------LRGGGGGSGLTQLVGSGRGS--GVTHSVGTHA 432
P R+R + R +P R R G S TQ G R + G +HS +
Sbjct: 511 -PQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHS---RS 566
Query: 433 LATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAA 492
ATR SR+ P R ++P R S R G R P R+
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSR 626
Query: 493 ALPGI--AVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR 540
+ + SPA G R + + A RG+ + P R
Sbjct: 627 TRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPAR 676
Score = 44.3 bits (103), Expect = 3e-04
Identities = 104/447 (23%), Positives = 153/447 (34%), Gaps = 55/447 (12%)
Query: 69 PTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPG-LDCAGSAPAP 127
PT + ++R P+ A + GP T+ A G R+ A P L A APA
Sbjct: 2318 PTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIA--GSRTAAALAPASLTSARMAPAL 2375
Query: 128 SGAQSCGGPAPASALRR-------PLTQWDAS----GGGGRGSHSGPRAGTPGGGRSSRA 176
SGA P SA R PL S + + RA +P R +A
Sbjct: 2376 SGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSP-SSRMGQA 2434
Query: 177 GARRKTPLS----LCPLKLRKGSSRRC------QGLGSSWGGSGTPPPPRALWNRHGGAA 226
++ P + P+ RC GS SG + H G
Sbjct: 2435 PSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGML 2494
Query: 227 GARAQVRGSEKRACPGSTL--PPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPT 284
A P S + PP+S A A +R+ S+ SS S+S +
Sbjct: 2495 SVPAP-------GVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSS 2547
Query: 285 GERSSREPLLDPSKAARASALPT---ARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRT 341
SS S + S+LP + P+ A + G +PT K R+
Sbjct: 2548 SSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRS 2607
Query: 342 DLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPG-----KPAPRG 396
S++ S + + S + + SS + + +PS A+PG KPA
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSS-SSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPK 2666
Query: 397 SAPPARLRGGGGGSGLTQL----------VGSGRGSGVTHSVGTHALATRRGSRAPRPVG 446
PP R + L V R S + ++ RGSR + G
Sbjct: 2667 KPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQR-G 2725
Query: 447 VLRGVPHFRPLSSPAPQSPPRSPSVRA 473
R H R +P+P+ P R S R+
Sbjct: 2726 DSRSPSHKRRRETPSPR-PMRHRSSRS 2751
Score = 40.8 bits (94), Expect = 0.003
Identities = 109/480 (22%), Positives = 153/480 (31%), Gaps = 86/480 (17%)
Query: 90 SGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQW 149
+ P+R R ++ L S ++ P + S + PAPA R ++
Sbjct: 397 ASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSS 456
Query: 150 DASGGGGRG------SHSGPRAGTPGGGRS----SRAGARRKTPLSLCPLKLRKGSSRRC 199
S G SHS + G RS R +R +TP + R RR
Sbjct: 457 PTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRS 516
Query: 200 QGLGSSWGGSGTPP-------PPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLA 252
+ WG S +P P R W+R Q RG + A G + S
Sbjct: 517 RS-AQRWGRSRSPQRRGRSRSPQRPGWSR-----SRNTQRRGRSRSARRGRSHSRSPATR 570
Query: 253 GCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAH 312
G R R P+ S R R SR S PT R +
Sbjct: 571 G-------------RSRSRTPARRGRSRSRTPARRRSR------------SRTPTRRRSR 605
Query: 313 ASPPSLAAAQWRLGGGK-RKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAER 371
+ P+ R G + R P + R+ + R R+ PA R
Sbjct: 606 SRTPA------RRGRSRSRTPARRRSRTRSPVR-------RRSRSRSPA----------R 642
Query: 372 HGGSSGARTLPTPSRARPGKPAPRG---SAPPARLRGGGGGSGLTQLVGSGRGSGVTHSV 428
G S +RT R+R PA RG S PAR R G S G R
Sbjct: 643 RSGRSRSRTPARRGRSRSRTPARRGRSRSRTPAR-RSGRSRSRTPARRGRSRSRTPRRGR 701
Query: 429 GTHALATRRG---SRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSC 485
RRG SR P+ G + S + + + S R+ + R
Sbjct: 702 SRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS 761
Query: 486 PQAPRAAALPGIAV------LAPSPAHDWGGQRCEGCGGGSQPFA-GRRAERGKRGAGVP 538
+PR+ A +++ +P P G SQP A R R R + P
Sbjct: 762 LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP 821
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 57.4 bits (137), Expect = 3e-08
Identities = 121/509 (23%), Positives = 161/509 (31%), Gaps = 69/509 (13%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRS 110
P+G+ T TP GP PS P + GP A + G +
Sbjct: 936 PKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP--------ATPSPKGAPT 987
Query: 111 RRAAGPGLDCAGSA-PAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPG 169
AA P G A P+P GA + P S P G S P A TP
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGA------STPPAATPP 1041
Query: 170 GGRSSRAG-----ARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGG 224
+ S A TP + P KG G+ + TPP P+ GG
Sbjct: 1042 SPKGSPAATPLPKGAPTTPAATLPSP--KGGPATPSLKGAPTPPAATPPSPK------GG 1093
Query: 225 AAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRAR-GHGGVQRQRFSAPSSHSTSGGRP 283
A + G+ +PP++ G A H G + P S P
Sbjct: 1094 PATPSPK----------GAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATP 1143
Query: 284 TGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDL 343
+ + P P A P + A +P AA GG P+ KGA T
Sbjct: 1144 PPKGAPTTPAATPPSPKGGLATPPPKGAPTTP---AATPPSPKGGLATPSP-KGAPTTPA 1199
Query: 344 STAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARL 403
+T P+ G A +G+ A G T P+P G P + PP+
Sbjct: 1200 AT--PPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT-PSPK----GAPTTPAATPPS-- 1250
Query: 404 RGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQ 463
GG G+ T LAT AP P V P P +SP P+
Sbjct: 1251 --PKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP-PK 1307
Query: 464 SPPRSPSVRAFGPRLGAGRLSCPQAPRAAAL-----PGIAVLAPSPAHDWGGQRCEGCGG 518
P P+ P+ G AP A+ G L + GG
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKE 1367
Query: 519 GSQPFAGRRAERG---------KRGAGVP 538
G P A + +G KRG +P
Sbjct: 1368 GPTPPAATPSHKGGPAMTPPSPKRGPAIP 1396
Score = 56.6 bits (135), Expect = 6e-08
Identities = 122/487 (25%), Positives = 165/487 (33%), Gaps = 68/487 (13%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPS--GSLT---TRRPRDAGEAAVSGPSRQRRTSRARTAL 105
P+G+ T TP GP PS G+ T P G A + + T A T
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Query: 106 WGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPL----TQWDASGGGGRGSHS 161
+ S AA P A + PA + GGPA S P T GG S
Sbjct: 1042 SPKGSP-AATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPK 1100
Query: 162 G---PRAGTPGGGRSSRAGARRK----TPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPP 214
G P A TP + A K TP + P KG G+ + TPP
Sbjct: 1101 GAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSP--KGGLATPPPKGAPTTPAATPPS 1158
Query: 215 PRALWNRHGGAAGARAQVRGSEKRACPGS------TLPPSSVLAGCVGTRARGHGGVQRQ 268
P+ GG A + + A P S T P T GG+
Sbjct: 1159 PK------GGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1212
Query: 269 R-FSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVA----HASPPSLAAAQW 323
AP++ + + P G ++ P P+ A P A +P AA
Sbjct: 1213 SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPP 1272
Query: 324 RLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPT 383
L GG P KGA + T P+ G A P +G+ + A T P+
Sbjct: 1273 SLKGGLATPPH-KGAPNPAVVTPPS--PKGGPATSPPKGAP----------TPPAATPPS 1319
Query: 384 PSRARPGKPAPRGSAPPARLR--GGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRA 441
P + PG P P+G+ P + G L S +G T S ++ G
Sbjct: 1320 P-KGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPS-------SKEGPTP 1371
Query: 442 PRPVGVLRGVPHFRPLSS------PAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
P +G P P S P+P+ P SP+V P+ + P AA P
Sbjct: 1372 PAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAP---ATPVTREGAATP 1428
Query: 496 GIAVLAP 502
L P
Sbjct: 1429 SKGDLTP 1435
Score = 37.4 bits (85), Expect = 0.037
Identities = 116/506 (22%), Positives = 170/506 (33%), Gaps = 96/506 (18%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRS 110
P+G+ T TPA P P G L T P+ A + P + A + G +
Sbjct: 1191 PKGAPT----TPAAT---PPSPKGGLATPSPKGAPTTPAATPPSPKG-GLATPSPKGAPT 1242
Query: 111 RRAAGPGLDCAGSA-PAPSGAQSCGGPAPAS---ALRRP----------LTQWDASGGGG 156
AA P G A P P GA + P S L P +T GG
Sbjct: 1243 TPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA 1302
Query: 157 RGSHSG---PRAGTPGGGRSSRAGARRK---TPLSLCPLKLRKGSSRRCQGLGSSWGGSG 210
G P A TP + S K TP ++ P KG+ SS GG
Sbjct: 1303 TSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPS-PKGTPTLPATTPSSKGGPT 1361
Query: 211 TPP------PPRALWNRHGGAAGARAQVRGSEKR--ACPGSTLPPSSVLAGCVGTRARGH 262
TP PP A + GG A S KR A P P+S + +
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPA----MTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPA 1417
Query: 263 GGVQRQRFSAPS------------------SHSTSGGRPTGERSSREPLLDPSKAARASA 304
V R+ + PS + S G P S +P L P+ +
Sbjct: 1418 TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL-PAVTPPSPK 1476
Query: 305 LPTA--RVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLST-AEEEDPRSGRALEPAQ 361
P A +VA +S P A A G P V+ + + +T + DP + A ++
Sbjct: 1477 EPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSK 1536
Query: 362 GSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRG 421
+ A + A T+P+P + P P P+ + + +T
Sbjct: 1537 KTPA-TLAPKEALIPPAMTVPSPKKT-PAIPTPKEAPATPSSKEASSPPAVTP------- 1587
Query: 422 SGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAG 481
+T +G+ +P+ + + V +SP+P+ P P+V P G
Sbjct: 1588 ------------STYKGAPSPKELLIPPAV------TSPSPKEAPTPPAVTPPSPEKG-- 1627
Query: 482 RLSCPQAPRAAALPGIAVLAPSPAHD 507
P P P + PS D
Sbjct: 1628 ----PATPAPKGTPTSPPVTPSSLKD 1649
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 57.0 bits (136), Expect = 4e-08
Identities = 95/388 (24%), Positives = 128/388 (32%), Gaps = 62/388 (15%)
Query: 68 GPTRPSGSLTTRRPRDAGEAAVSGPS---RQRRTSRARTALWGRRSRRAAGPGLDCAGSA 124
GP+ P G + RP+ G+A+ S P + R+ +A + +AGP +
Sbjct: 150 GPSEPRGIYASERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTAGG-SAGPEACSSAER 208
Query: 125 PAPSGAQSCGGPAPASALR------RPLTQWDASGGGGR------------------GSH 160
A +G P A A+R RP T +GG GR G
Sbjct: 209 RARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQP 268
Query: 161 SGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWN 220
G GG R + +R S P R + +G G P P AL
Sbjct: 269 RTSPGGADGGPRRQNSVRQRPPDASPSPGSARPAREPSLERVG------GHPTSPAALSR 322
Query: 221 RHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSG 280
+ + A E A P + PP S G + +A+ G Q P +
Sbjct: 323 AWASSWESEA---APEPAAPPAAPSPPDSPAEGRL-VKAQYIPGAQAATRGLPGRAARRK 378
Query: 281 GRPTGERSSRE---PLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKG 337
P S E P P A R + A SP + A++ + T L G
Sbjct: 379 PPPLTRGRSVEQSPPRERPRAAGRRGRMAEASGRRGSPRARKASR------SQSETSLLG 432
Query: 338 AVRTDLS------TAEEEDPRSGR---------ALEPAQGSELWARAERHGGSSGARTLP 382
S TAE E+PR R A + A W + G R P
Sbjct: 433 RASAVPSGPPKYPTAEREEPRPPRPRRGPAPTLAAQAAGSCRRWRSTAEIDAADGRRVRP 492
Query: 383 TPSRARPGKPAPRGSAPPARLRGGGGGS 410
AR P P SAP RL G GS
Sbjct: 493 RAPAARVPGPGPSPSAPQRRLLYGCAGS 520
Score = 45.4 bits (106), Expect = 1e-04
Identities = 99/402 (24%), Positives = 134/402 (33%), Gaps = 73/402 (18%)
Query: 132 SCGGP-APASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLK 190
S GGP +P S G GS S R G P R A R K+ P
Sbjct: 123 STGGPDSPPSTF--------CGDSGFSGSSSYGRLG-PSEPRGIYASERPKSLGDASP-- 171
Query: 191 LRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSV 250
S+ G ++ S + P P A GG+AG A +E+RA G L PS +
Sbjct: 172 ----SAPEVVGARAAVPRSFSAPYPTA-----GGSAGPEA-CSSAERRARAGPFLTPSPL 221
Query: 251 LA---------GCVGTRARGHGGV-------------QRQRFSAPSSHSTSGGRPTGERS 288
A G T + GG +R+R A ++ GG G R
Sbjct: 222 HAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGPRR 281
Query: 289 SREPLLDPSKAARA--SALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTA 346
P A+ + SA P A PSL R+GG P L A + +
Sbjct: 282 QNSVRQRPPDASPSPGSARP------AREPSLE----RVGGHPTSPAALSRAWASSWESE 331
Query: 347 EEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGG 406
+P + A S R + GA+ +R PG+ A R P R R
Sbjct: 332 AAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAA---TRGLPGRAARRKPPPLTRGRSV 388
Query: 407 GGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPP 466
+ +GR + + G RRGS R + +S P PP
Sbjct: 389 EQSPPRERPRAAGRRGRMAEASG------RRGSPRARKASRSQSETSLLGRASAVPSGPP 442
Query: 467 RSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDW 508
+ P+ PR P PR P +A A W
Sbjct: 443 KYPTAEREEPR--------PPRPRRGPAPTLAAQAAGSCRRW 476
Score = 34.3 bits (77), Expect = 0.31
Identities = 67/265 (25%), Positives = 84/265 (31%), Gaps = 31/265 (11%)
Query: 270 FSAPSSHSTSG-GRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGG 328
FS SS+ G P G +S P S + + P A A+ P +A + GG
Sbjct: 140 FSGSSSYGRLGPSEPRGIYASERP---KSLGDASPSAPEVVGARAAVPRSFSAPYPTAGG 196
Query: 329 KRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRAR 388
P A E R+G L P S L A A R G +P
Sbjct: 197 SAGPEACSSA---------ERRARAGPFLTP---SPLHAVAMRSPRPCGRPPTDSPDAGG 244
Query: 389 PGKPAPRG-SAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGV 447
G+P SA R R G G T G+ G R+ S RP
Sbjct: 245 AGRPLDGYISALLRRRRRRGAGQPRTSPGGADGGP------------RRQNSVRQRPPDA 292
Query: 448 LRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHD 507
RP P+ + P+ A R A AP AA P SPA
Sbjct: 293 SPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEG 352
Query: 508 --WGGQRCEGCGGGSQPFAGRRAER 530
Q G ++ GR A R
Sbjct: 353 RLVKAQYIPGAQAATRGLPGRAARR 377
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 56.2 bits (134), Expect = 8e-08
Identities = 99/376 (26%), Positives = 127/376 (33%), Gaps = 74/376 (19%)
Query: 178 ARRKTPLSLCPLKLRK--------GSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGAR 229
A ++P +LR+ G R C G G G P A GA
Sbjct: 48 AHTRSPAQYSQTRLRRRRQGAVIVGRRRACPGRGRG----GLPG---------AAALGAG 94
Query: 230 AQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSS 289
AQ + A P + P V G RA GG R+R P + + G P E
Sbjct: 95 AQQPRRRRLAQPPGSRAPLQV-GGAPRRRAHLTGGPPRRR---PPRLAAAHGLPASEAPG 150
Query: 290 REPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEE 349
P D ++ L +AR+ PP+ AA WR G + +P +L +
Sbjct: 151 LRP--DSARTRLRLRLASARLPRGLPPAPAAGLWRAGCTRLRPLLL------------QP 196
Query: 350 DPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGG 409
P L + G EL AR +LP PS A P P P APPA
Sbjct: 197 PPMLSPGLAQSPGVELHAR---------TLSLPAPSPA-PCLPPP---APPAARTPSAHS 243
Query: 410 SGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPH-----FRPLSSPAPQS 464
T + T AL RG P ++ G P S PAP +
Sbjct: 244 PAHTHF------TLTLAEAHTRALTPARGGGEGDPGPIVGGRPENEDSLASQTSPPAPPA 297
Query: 465 P-PRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPF 523
P P + R+ G R GA L APRA PS W +R +P
Sbjct: 298 PVPSTARARSPGARRGAREL----APRAGRR-----RQPSGRTSW-RRRARREQRDREPA 347
Query: 524 AGRRAERGKRGAGVPW 539
RG AG W
Sbjct: 348 VCGAWPRGSHAAGAGW 363
Score = 31.6 bits (70), Expect = 2.0
Identities = 52/201 (25%), Positives = 62/201 (30%), Gaps = 45/201 (22%)
Query: 317 SLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSS 376
S A W LG + +R E + PAQ S+ R R G
Sbjct: 11 SSAFMTWALGPSAYSKIPPRLPIRMTWGIPRESGIQKAHTRSPAQYSQTRLRRRRQGAVI 70
Query: 377 GARTLPTPSRARPGKPAP----RGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHA 432
R P R R G P G+ P R R
Sbjct: 71 VGRRRACPGRGRGGLPGAAALGAGAQQPRRRR---------------------------- 102
Query: 433 LATRRGSRAPRPVGVLRGVPHFRP--LSSPAPQSPPR------SPSVRAFGPRLGAGRLS 484
LA GSRAP VG G P R P + PPR P+ A G R + R
Sbjct: 103 LAQPPGSRAPLQVG---GAPRRRAHLTGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTR 159
Query: 485 CPQAPRAAALPGIAVLAPSPA 505
+A LP L P+PA
Sbjct: 160 LRLRLASARLP--RGLPPAPA 178
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 55.8 bits (133), Expect = 1e-07
Identities = 103/433 (23%), Positives = 142/433 (32%), Gaps = 73/433 (16%)
Query: 109 RSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALR----------RPLTQWDASGGGGRG 158
R+ A PGL P P G+ P +ALR +PL + GG
Sbjct: 15 RTPAARAPGL----LTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 159 SHSGPRAG---------------TPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLG 203
S PRAG P GR RA + T R + R LG
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 204 SSW----------GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAG 253
G T P R+ +AGAR G PG+ P + +
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSAL-----SAGARRDTSG----PTPGTPSPAMARRSR 181
Query: 254 CVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHA 313
GT G+ R SA T G R + +S +PS AAR +
Sbjct: 182 AAGTEV----GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 237
Query: 314 SPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHG 373
+ SL+++ L R +G R ++ + P+ +AL P Q + A
Sbjct: 238 ASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPAL 296
Query: 374 GSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHAL 433
G + L TPS + A + APP L + S +T + T
Sbjct: 297 GPLSSSPLATPSPS----AALQSQAPPT-------------LPATPHSSSLTCQLATPLP 339
Query: 434 ATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAF--GPRLGAGRLSCPQAPRA 491
AP + L P P + P + +F P L PQAP A
Sbjct: 340 LAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA 399
Query: 492 AALPGIAVLAPSP 504
ALP + PSP
Sbjct: 400 LALPPLQA-PPSP 411
Score = 32.7 bits (73), Expect = 0.91
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Query: 436 RRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
+ G+ A P G+ RP SP P P ++R G GR P A RA +
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRK--PLAERAGGIG 66
Query: 496 GIAVLAPSPAHDWGGQRCEGCGG---GSQPFAGRRAER 530
G + P A G R G S+P A R ER
Sbjct: 67 GATI--PESAPRAGPTRSAGTSSRNPASRPPASGRGER 102
Score = 32.0 bits (71), Expect = 1.5
Identities = 66/262 (25%), Positives = 80/262 (30%), Gaps = 46/262 (17%)
Query: 111 RRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGG 170
RR PG D + S P + A + G P P S R P + G HS TP
Sbjct: 587 RRPPTPGPDTSVSGPRLTLALAPGPPPPPS--RSPSS---TLSGPDLAGHSSSATSTPEE 641
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARA 230
R +G GG+ PPP A AA +R
Sbjct: 642 LRGYDSGPE---------------------------GGAAASPPPDAELAACHPAAWSRG 674
Query: 231 QVRGSEKRACPGSTLP------PSSVLAGCVGTRARGHGGVQRQ--RFSAPSSHSTSGGR 282
R PG+ LP P S C G S TSGG+
Sbjct: 675 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 734
Query: 283 PT----GERSSREPLLDPSKAARASALPTARVAHASPPS--LAAAQWRLGGGKRKPTVLK 336
SSR P AL + V H + LAAA+ GG P +
Sbjct: 735 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794
Query: 337 GAVRTDLSTAEEEDPRSGRALE 358
G T + A D GR E
Sbjct: 795 GGGVTGGARAALSDAELGRWAE 816
Score = 31.2 bits (69), Expect = 2.6
Identities = 130/543 (23%), Positives = 167/543 (30%), Gaps = 92/543 (16%)
Query: 63 AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAG 122
AG + G RP+ S R P + +VS S T + A R R +AG GL
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA----RRRPSAGGGLQRPA 238
Query: 123 S-----------APAPSGAQSCGGP-APA----------SALRRPLT---QWDASGGGGR 157
S +PA SG + G P APA ALR P + DA+ G
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Query: 158 GSHSGPRAGTPGGGRSSRAGARRK-TPLS-------LCPLKLRKGSSRRCQGLGSSWGGS 209
S S +P S+A TP S PL L S L +
Sbjct: 299 LSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPP 358
Query: 210 GTPPP--------PRALWNRHGGAAGARAQVRGSEKRACPGSTLPP---------SSVLA 252
TPP P + + + +A P LPP S L+
Sbjct: 359 ATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS 418
Query: 253 GCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDP-SKAARASALPTARVA 311
+ + AP S S P+ P S A P+A
Sbjct: 419 PLATPSPQAPNALAVHLLQAPFSPPPS-----------PPVQAPFSPPASPPVSPSATPP 467
Query: 312 HASPPSLAAAQWRLGGGK-RKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAE 370
+PPSLAA ++ P + A + P A P Q A
Sbjct: 468 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP 527
Query: 371 RHGGSSGARTLP-----TPSRARPGKP--APRGSAPPARLRGGGGGSGLTQLVGSGRGSG 423
S + P +PS + P P P APP + L Q+ S S
Sbjct: 528 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL------AAPLLQVPPSPPASP 581
Query: 424 VTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRL---GA 480
L R P P + G L+ P P RSPS GP L +
Sbjct: 582 T--------LQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS 633
Query: 481 GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVPWR 540
S P+ R A SP D C P A A RG GA +PW
Sbjct: 634 SATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP-APPLAFRGAPGAPLPWP 692
Query: 541 TQT 543
T
Sbjct: 693 PAT 695
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 55.5 bits (132), Expect = 1e-07
Identities = 119/451 (26%), Positives = 148/451 (32%), Gaps = 77/451 (17%)
Query: 113 AAGPGLDCAGSAPAPSGAQSCGGP-APASALRRPLTQWDASGGGGRGSHSGPRA--GTPG 169
A PGL P P G + GP P A P Q GG GS GP+ G PG
Sbjct: 689 AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGS-PGPKGDKGEPG 747
Query: 170 G----GRSSRAGARRKT-PLSLC-----PLKLRKGSSRRCQGLGSSWGGSGT-----PPP 214
G G + G R T P+ P +G + G+ G G PP
Sbjct: 748 GPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPG 807
Query: 215 PRALWNRHGGAAGARAQVRGSEKRACPGSTLP--PSSVLAGCVGTRARGHGGVQRQRFSA 272
P GA G + G +R PG P V G+ G G
Sbjct: 808 PAGF----PGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPG-------- 855
Query: 273 PSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKP 332
P G P G ++ P AR P + PP + + + G P
Sbjct: 856 PQGVKGERGSPGGPGAAGFP------GARGLPGPPGSNGNPGPPGPSGSPGK--DGPPGP 907
Query: 333 TVLKGAVRTD-LSTAEEEDPRSGRALEP-AQGSELWARAERHGGSSGARTLPTPSRARPG 390
GA + +S + + + G P AQG G +GAR L P PG
Sbjct: 908 AGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGP----PG 963
Query: 391 KPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRG 450
P PRGS P ++G G G + L+ RG P+ + L G
Sbjct: 964 MPGPRGSPGPQGVKGESG------------------KPGANGLSGERGPPGPQGLPGLAG 1005
Query: 451 VPHFRPLSSPAPQS---PPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHD 507
P P S P R S G R G P AP A PG P P
Sbjct: 1006 TAG-EPGRDGNPGSDGLPGRDGSPGGKGDR---GENGSPGAPGAPGHPG----PPGPVGP 1057
Query: 508 WGGQRCEGCGGGSQPFAGRRAERGKRGAGVP 538
G G G + P AG G RGA P
Sbjct: 1058 AGKSGDRGESGPAGP-AGAPGPAGSRGAPGP 1087
Score = 53.5 bits (127), Expect = 5e-07
Identities = 123/481 (25%), Positives = 158/481 (32%), Gaps = 77/481 (16%)
Query: 122 GSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGG-GRSSRAGARR 180
G P A G P P A+ SG G+ SG R G PG G G +
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAI-------GPSGPAGKDGESG-RPGRPGERGLPGPPGIKG 252
Query: 181 KTPLSLCP-LKLRKGSSRR-----------CQGLGSSWGGSGTPPP--PRALWNRHG--- 223
+ P +K +G R +G G +G P P PR G
Sbjct: 253 PAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPG 312
Query: 224 --GAAGARAQ--VRGSEKRACPGSTLPPSSV-LAGCVGTRAR-------GHGGVQRQRFS 271
GAAGAR RGS+ + PG PP + G G + G G QR
Sbjct: 313 LPGAAGARGNDGARGSDGQ--PGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGE 370
Query: 272 -APSSHSTSGGRPTGERSSREP----LLDPSKAARASALPTARVAHASPPSLAAAQWRLG 326
P H+ + G P + P + P+ A L AR + A R G
Sbjct: 371 PGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGG 430
Query: 327 GGKRKPTVLKG----------AVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHG--- 373
G+ KG A + A+ ED + G EP A ER
Sbjct: 431 AGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGF 490
Query: 374 -GSSGARTLP-----TPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHS 427
G +G +P R PG PRG+A G GG G+ + GS G G
Sbjct: 491 RGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGK 550
Query: 428 VGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAF-------GPRLGA 480
G G P RG P + P P+ +P GP+
Sbjct: 551 PGPPGSQGESGRPGPPGPSGPRGQPGV--MGFPGPKGNDGAPGKNGERGGPGGPGPQGPP 608
Query: 481 GR--LSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRG-AGV 537
G+ + PQ P PG P G Q G GG G+ E G +G AG
Sbjct: 609 GKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGE-NGKPGEPGPKGDAGA 667
Query: 538 P 538
P
Sbjct: 668 P 668
Score = 50.8 bits (120), Expect = 3e-06
Identities = 120/495 (24%), Positives = 151/495 (30%), Gaps = 78/495 (15%)
Query: 116 PGLD-CAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSS 174
PGL AG +P G P PA P + G G RG+ G P G
Sbjct: 785 PGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGP 844
Query: 175 RAGARRKTPLSLCPLKLRKGSSRR--------CQGLGSSWGGSGTPPPPRALWN--RHG- 223
G+ P +K +GS +GL G +G P PP + + G
Sbjct: 845 PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGP 904
Query: 224 -------------GAAGARAQVRGSEKRACPGSTLPPSSV----LAGCVGTRA-RGHGGV 265
G +G + ++ PG+ PP + +AG G R G G+
Sbjct: 905 PGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGM 964
Query: 266 QRQRFS-APSSHSTSGGRP-----TGERSSREPLLDPSKAARASALPTARVAHASPPSLA 319
R S P G+P +GER P P A A R + L
Sbjct: 965 PGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGE--PGRDGNPGSDGLP 1022
Query: 320 AAQWRLGG-GKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGA 378
GG G R GA P + PA S R E
Sbjct: 1023 GRDGSPGGKGDRGENGSPGA------PGAPGHPGPPGPVGPAGKSG--DRGESGPAGPAG 1074
Query: 379 RTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRG 438
P SR PG PRG RG G G G+ G G G
Sbjct: 1075 APGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPG 1134
Query: 439 SRAPR-PVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGI 497
PR PVG P P PP R G R G P P PG
Sbjct: 1135 PAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNR--GERGSEGSPGHPGQPGPPGPPG- 1191
Query: 498 AVLAPSPAHDWGGQRCEGCGG-GSQPFAGRRAERGKRGAGVPW-----------RTQTLS 545
AP P CGG G+ AG E K G P+ + ++
Sbjct: 1192 ---APGPC----------CGGVGAAAIAGIGGE--KAGGFAPYYGDEPMDFKINTDEIMT 1236
Query: 546 LLRRCSGALRELESP 560
L+ +G + L SP
Sbjct: 1237 SLKSVNGQIESLISP 1251
Score = 43.5 bits (101), Expect = 5e-04
Identities = 132/541 (24%), Positives = 168/541 (31%), Gaps = 102/541 (18%)
Query: 68 GPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAP 127
GP P G+ P + G + G + R AR + + PG P
Sbjct: 297 GPMGPRGA-----PGERGRPGLPGAAGARGNDGARGS-----DGQPGPPGPPGTAGFPGS 346
Query: 128 SGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA-----GTPGG-GRSSRAGARRK 181
GA+ GPA + Q G G GP G+PGG G AG
Sbjct: 347 PGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGA 406
Query: 182 TPLSLCPLKLRKGSSRRCQGLGSSWGGSGTP--------PPPRALWNRHG--GAAGARAQ 231
L + GL GG+G P P PR G G GA+ +
Sbjct: 407 PGLMGARGPPGPAGANGAPGLR---GGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGE 463
Query: 232 VRGSEKRACPGSTLPPSSVLAGCVGTRA----RGHGGVQRQRFSAPSSHSTSGGR----P 283
K PG P ++ L G G R RG G P +G R P
Sbjct: 464 ---DGKDGSPGE--PGANGLPGAAGERGAPGFRGPAGPN----GIPGEKGPAGERGAPGP 514
Query: 284 TGERSSR-EPLLDPSKAARAS-ALPTARVAHAS-----PPSLAAAQWRLG-----GGKRK 331
G R + EP D +P + S PP R G G + +
Sbjct: 515 AGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQ 574
Query: 332 PTVL-----KGAVRTDLSTAEEEDPRS-GRALEPAQGSELWARAERH----GGSSGARTL 381
P V+ KG E P G P + E + GG G
Sbjct: 575 PGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGP 634
Query: 382 PTPS--------------RARPGKPAPRGSAPPARLRGGGGGS---------GLTQLVGS 418
P P +PG+P P+G A GG G + GL G
Sbjct: 635 PGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGL 694
Query: 419 GRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFR-PLSSPAPQSPPRSPSVRAFGPR 477
G+G G A G L+G+P R L SP P+ P GP
Sbjct: 695 RGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPG----GP- 749
Query: 478 LGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGV 537
GA + PR P + P PA G + EG G AG R G+RG
Sbjct: 750 -GADGVPGKDGPRGPTGP---IGPPGPAGQ-PGDKGEGGAPGLPGIAGPRGSPGERGETG 804
Query: 538 P 538
P
Sbjct: 805 P 805
Score = 40.8 bits (94), Expect = 0.003
Identities = 52/193 (26%), Positives = 64/193 (33%), Gaps = 37/193 (19%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTS-----RARTAL 105
P G V + + + GP P+G+ P AG GP R R +
Sbjct: 1051 PPGPVGPAGKSGDRGESGPAGPAGA-----PGPAGSRGAPGPQGPRGDKGETGERGAAGI 1105
Query: 106 WGRRSRRAAGPGLDCAGSAPAPSGAQ-SCGGPAPASALRRPLTQWDASGGGGRGSHSGPR 164
G R PG A +P P+G Q + G P PA R P+ G G H GP
Sbjct: 1106 KGHRGF----PGNPGAPGSPGPAGQQGAIGSPGPAGP-RGPVGPSGPPGKDGTSGHPGPI 1160
Query: 165 AGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGG 224
P G R +R R +G G G P PP A GG
Sbjct: 1161 G--PPGPRGNR-------------------GERGSEGSPGHPGQPGPPGPPGAPGPCCGG 1199
Query: 225 AAGARAQVRGSEK 237
A G EK
Sbjct: 1200 VGAAAIAGIGGEK 1212
Score = 32.7 bits (73), Expect = 0.91
Identities = 41/155 (26%), Positives = 50/155 (32%), Gaps = 10/155 (6%)
Query: 380 TLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGS 439
T PT G P+G P + G G G+ GS G + + S
Sbjct: 93 TAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYS 152
Query: 440 RAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAV 499
V GV P P PP P GP +G P +P PG
Sbjct: 153 PQYDSYDVKSGVAVGGLAGYPGPAGPPGPP-----GPPGTSGHPGSPGSPGYQGPPG--- 204
Query: 500 LAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRG 534
P A G G G S P AG+ E G+ G
Sbjct: 205 -EPGQAGPSGPPGPPGAIGPSGP-AGKDGESGRPG 237
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 55.1 bits (131), Expect = 2e-07
Identities = 97/370 (26%), Positives = 121/370 (32%), Gaps = 61/370 (16%)
Query: 134 GGPAPASALRRPLTQWDASGGGG-------RGSHSGPRAGTPGGGRSSRAGARRKTPLSL 186
GGP+P P A GGGG R PRA + +R+G RK PL
Sbjct: 1053 GGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPL-- 1110
Query: 187 CPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLP 246
++ + G G G PP P A SEK + P +P
Sbjct: 1111 ---------VKQTKVEGEPQKGGGLPPAPSP--TSPASPQPPPAVAAPSEKNSIP---IP 1156
Query: 247 PSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALP 306
+ A + R G + T GG G S P + P + S +P
Sbjct: 1157 TIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPS-PSPVP 1215
Query: 307 TARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELW 366
T ASP A + G L GA R + E RS L G E
Sbjct: 1216 TP----ASPSGPATLDFTSQFG----AALVGAARREGGWQNEARRRSTLFLSTDAGDE-- 1265
Query: 367 ARAERHGGSSGARTLPTPS-RARPGKPAPRG---SAPPARLRGGGGGSGL------TQLV 416
GG G T P R R K G + P RL G G+G ++
Sbjct: 1266 -----DGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGGYGAGSRAY 1320
Query: 417 GSGRGSGVTHSV-----GTHALATRRGSRAPRPVGVLRGVPHFRPLSSP-----APQSPP 466
G G GS S H L T + P+G+ R L APQ PP
Sbjct: 1321 GGGGGSSAFTSFLPPRPLVHPL-TGKALDPASPLGLALAARE-RALKESSEGGGAPQPPP 1378
Query: 467 RSPSVRAFGP 476
R PS R P
Sbjct: 1379 RPPSPRYEAP 1388
Score = 37.0 bits (84), Expect = 0.048
Identities = 106/448 (23%), Positives = 152/448 (33%), Gaps = 92/448 (20%)
Query: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDA-----------SGGGGRGSHSGPRAGTPG 169
A +APAP+ Q GP P + + D+ S S S G+ G
Sbjct: 1652 APAAPAPAAPQP--GPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAG 1709
Query: 170 GGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPP-----RALWNRHGG 224
GG + AG L + G + +GGS TP PP G
Sbjct: 1710 GGGGAGAGVASGPELLDTYVAYLDGQA---------FGGSSTPGPPYPPQLMTPSKLRGR 1760
Query: 225 AAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPT 284
A GA +R P S ++ T A G + + S P + +GG
Sbjct: 1761 ALGASGGLRPGPSGGLRDPVTPTSPTVS---VTGAGTDGLLALRACSGPPTAGVAGG--- 1814
Query: 285 GERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKP-----TVLKGAV 339
+ EP + P AS+LP + P L G +P +K ++
Sbjct: 1815 --PVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPP--LPGPLAQPQASALATVKASI 1870
Query: 340 RTDLSTAEEE---DPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRG 396
++LS+ ++ +G AL A+G HGG+S P
Sbjct: 1871 ISELSSKLQQFGGSSAAGGALPWARGGSGGGGDSHHGGASYV-------------PERTS 1917
Query: 397 SAPPARLRGGGGGSGLTQLVGS-------------GRGSGVTHSVGTHALATR-RGSRAP 442
S RL S L++ V S G+GV+ + AT S +
Sbjct: 1918 SLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPSASSSS 1977
Query: 443 RPVGVLRGVPHFR--PLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVL 500
L+GV PL AP SPS+ L A APR ++LP +L
Sbjct: 1978 TSTRHLQGVEFEMRPPLLRRAP-----SPSL------LPASEHKVSPAPRPSSLP---IL 2023
Query: 501 APSPAH----DWGGQRCEGCGGGSQPFA 524
P + D G G GG + PFA
Sbjct: 2024 PSGPLYPGLFDIRGSPTGGAGGSADPFA 2051
Score = 36.6 bits (83), Expect = 0.063
Identities = 59/225 (26%), Positives = 77/225 (34%), Gaps = 37/225 (16%)
Query: 206 WGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCV--GTRARGHG 263
W G G P P A H G+AG S+ A LPP + A RG
Sbjct: 1050 WRGGGPSPTPGAPSPSHHGSAGGGG--GSSQGPALRYFQLPPRAASAAMYVPARSGRGRK 1107
Query: 264 GVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQW 323
G ++ GG P PS + AS P PP++AA
Sbjct: 1108 GPLVKQTKVEGEPQKGGGLPPA----------PSPTSPASPQP--------PPAVAAPSE 1149
Query: 324 RLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPT 383
+ PT++ A T S+ S A P Q E GG G + P+
Sbjct: 1150 K--NSIPIPTIIIKAPSTS-SSGRSSQGSSTEAEPPTQ-------PEPTGGGGGGGSSPS 1199
Query: 384 PSRA-RPGKPAPRGSAPPARLRGGGGGSGLTQ----LVGSGRGSG 423
P+ A P P+P PA G +Q LVG+ R G
Sbjct: 1200 PAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREG 1244
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 54.3 bits (129), Expect = 3e-07
Identities = 106/413 (25%), Positives = 137/413 (33%), Gaps = 119/413 (28%)
Query: 132 SCGGPAPASALRR-----PLTQWDASGGGGRGSHSGPRAGTPG-----------GGRSSR 175
SCGG P+ R PL + S G G S +GP T G GG +
Sbjct: 315 SCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAG 374
Query: 176 AGARRKTPLSLCP-LKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRG 234
G P+ P K KG G G++ GG+ PPPPR+ A + Q G
Sbjct: 375 GGGGGYRPIIQSPGYKTGKG------GYGAAAGGATRPPPPRS-------TATPKCQSLG 421
Query: 235 SEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLL 294
P ++ G +A G GG Q +S G + G+
Sbjct: 422 G----------PAAAYATG----KASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQ 467
Query: 295 DPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSG 354
D SKA S P + PP LA Q P L+G
Sbjct: 468 DLSKAPSYSGGPPQPPSGPPPPGLATCQ------SYSPDQLQG----------------- 504
Query: 355 RALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQ 414
L QG G ++ ++ LPT A P G +P L G GGG G +
Sbjct: 505 -QLYGVQGEPY------PGPAAHSQGLPT---ASPSLSYSTGHSP--ALSGHGGGWGPSS 552
Query: 415 LVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAF 474
L G G S +H + RPL QSPP A
Sbjct: 553 LGGGGEAS-PSHII--------------------------RPL-----QSPP------AT 574
Query: 475 GPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDW--GGQRCEGCGGGSQPFAG 525
G G G P ++ L LAP A + G +G G GS+ AG
Sbjct: 575 GRPPGVGSPGAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDGSELLAG 627
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 53.9 bits (128), Expect = 4e-07
Identities = 131/487 (26%), Positives = 174/487 (35%), Gaps = 94/487 (19%)
Query: 64 GLDCGPTRPSGSLTTRRPR--DAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCA 121
G+D P P TR+ R D A +GP TA G +SRR G L A
Sbjct: 290 GVDAAPRAPE----TRQVRKVDGVNPAAAGPRG------GATACSGVQSRRPQGLALR-A 338
Query: 122 GSAPAPSGAQSCGGPAPASALR--RPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGAR 179
PA A S R +++ D S G G S R+ +P G RA +
Sbjct: 339 TLLPAKRSADMRWNSGSCSHFHILRKVSRPDLSLLHGLGLRS--RSESPAGQCVLRASQQ 396
Query: 180 RKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRA 239
R ++L G ++ +W + P +A R A ARAQ R
Sbjct: 397 RG-------VRLEGGGRQQLVPSQVAWRAARAPGRHQAAVLRRRRARVARAQQLA---RL 446
Query: 240 CPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKA 299
G + L + R +R R SAP+ P+ + P P A
Sbjct: 447 RVGHAVQAPQALQAQLHARLPS----RRARSSAPA--------PSAQGRCMTPARSPVAA 494
Query: 300 ARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAV---------RTDLSTAEEED 350
A+ L AR A+ S A W+ G G+R+P + R L+ E +
Sbjct: 495 REAARLRGARPGPAA--SAATRMWQ-GSGRRRPGPDPQELDPHCKLSFPRLPLTPTESQP 551
Query: 351 PRSGRALEPAQGSELWARAERHGGSSGARTL-----PTPSRARPGKPAPRGSAPPARLRG 405
P +E +G ARA G R L P RARPG S PA G
Sbjct: 552 PSHNLFVEELRG----ARAALARGWMLPRALRRQLCPIDPRARPG------SVAPAAASG 601
Query: 406 GGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRP--VGVLRG-----VPHFRPLS 458
S L SGR + + ++G H RRG+ A RP G RG FR ++
Sbjct: 602 SIESSSL-----SGRAARL--ALGKHRACLRRGTEAGRPRLAGERRGAGDGRARDFRRIA 654
Query: 459 SPAPQSPPRSPSVRAFG-PRLGAGRLSCPQAPRA------AAL-------PGIAVLAPSP 504
APQ P + G PR G L P A AAL P AP+
Sbjct: 655 LAAPQFPHLESNTLGRGRPRPGDWALQATDFPDATKPALGAALRRGPIVGPAAGFAAPAA 714
Query: 505 AHDWGGQ 511
D G +
Sbjct: 715 ERDPGAE 721
>gi|169213511 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 53.9 bits (128), Expect = 4e-07
Identities = 131/487 (26%), Positives = 174/487 (35%), Gaps = 94/487 (19%)
Query: 64 GLDCGPTRPSGSLTTRRPR--DAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCA 121
G+D P P TR+ R D A +GP TA G +SRR G L A
Sbjct: 290 GVDAAPRAPE----TRQVRKVDGVNPAAAGPRG------GATACSGVQSRRPQGLALR-A 338
Query: 122 GSAPAPSGAQSCGGPAPASALR--RPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGAR 179
PA A S R +++ D S G G S R+ +P G RA +
Sbjct: 339 TLLPAKRSADMRWNSGSCSHFHILRKVSRPDLSLLHGLGLRS--RSESPAGQCVLRASQQ 396
Query: 180 RKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRA 239
R ++L G ++ +W + P +A R A ARAQ R
Sbjct: 397 RG-------VRLEGGGRQQLVPSQVAWRAARAPGRHQAAVLRRRRARVARAQQLA---RL 446
Query: 240 CPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKA 299
G + L + R +R R SAP+ P+ + P P A
Sbjct: 447 RVGHAVQAPQALQAQLHARLPS----RRARSSAPA--------PSAQGRCMTPARSPVAA 494
Query: 300 ARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAV---------RTDLSTAEEED 350
A+ L AR A+ S A W+ G G+R+P + R L+ E +
Sbjct: 495 REAARLRGARPGPAA--SAATRMWQ-GSGRRRPGPDPQELDPHCKLSFPRLPLTPTESQP 551
Query: 351 PRSGRALEPAQGSELWARAERHGGSSGARTL-----PTPSRARPGKPAPRGSAPPARLRG 405
P +E +G ARA G R L P RARPG S PA G
Sbjct: 552 PSHNLFVEELRG----ARAALARGWMLPRALRRQLCPIDPRARPG------SVAPAAASG 601
Query: 406 GGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRP--VGVLRG-----VPHFRPLS 458
S L SGR + + ++G H RRG+ A RP G RG FR ++
Sbjct: 602 SIESSSL-----SGRAARL--ALGKHRACLRRGTEAGRPRLAGERRGAGDGRARDFRRIA 654
Query: 459 SPAPQSPPRSPSVRAFG-PRLGAGRLSCPQAPRA------AAL-------PGIAVLAPSP 504
APQ P + G PR G L P A AAL P AP+
Sbjct: 655 LAAPQFPHLESNTLGRGRPRPGDWTLQATDFPDATKPALGAALRRGPIVGPAAGFAAPAA 714
Query: 505 AHDWGGQ 511
D G +
Sbjct: 715 ERDPGAE 721
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 53.1 bits (126), Expect = 6e-07
Identities = 96/393 (24%), Positives = 140/393 (35%), Gaps = 57/393 (14%)
Query: 56 TDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAG 115
+ S H+ G T S + +G+++ G + + G S ++ G
Sbjct: 1068 SSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPG 1127
Query: 116 PGLDCAGSAPAPS-GAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG----TPGG 170
G +GS +PS G G +S+ + ++SG G S SG + G
Sbjct: 1128 HGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGS 1187
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARA 230
G SS G R G S R + GSS G S H G G+ +
Sbjct: 1188 GHSSGYGQHGS----------RSGQSSRGERHGSSSGSSS-----------HYGQHGSGS 1226
Query: 231 QVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSR 290
+ R GS PS RG G S+ H + GR SSR
Sbjct: 1227 RQSSGHGRQGSGSGHSPS-----------RGRHGSGLGHSSSHGQHGSGSGR----SSSR 1271
Query: 291 EPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEED 350
P S++ +S + S S A +Q G G G+ ST ++E
Sbjct: 1272 GPY--ESRSGHSSVF--GQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEG 1327
Query: 351 PRSGRAL---EPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGG 407
+G++ GS + RHG SG +PSR R G GS + G
Sbjct: 1328 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSG----QSPSRGRHGS----GSGHSSSYGQHG 1379
Query: 408 GGSGLTQLVG-SGRGSGVTHSVGTHALATRRGS 439
GSG + G G GSG + G H ++ + S
Sbjct: 1380 SGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSS 1412
Score = 52.4 bits (124), Expect = 1e-06
Identities = 80/337 (23%), Positives = 122/337 (36%), Gaps = 47/337 (13%)
Query: 107 GRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG 166
G S +++G G +GS +P Q G + + R G GR S SG
Sbjct: 2046 GSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRH------GSGSGRSSSSGQHG- 2098
Query: 167 TPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAA 226
PG G SS G + S G S +G G+ + RHG ++
Sbjct: 2099 -PGLGESSGFGHHESSSGQSSSYSQHGSGS----GHSSGYGQHGSRSGQSSRGERHGSSS 2153
Query: 227 GARAQV--RGSEKRACPGSTLPPSSVLAGCVGTRARGHG-GVQRQRFSAPSSHSTSGGRP 283
G+ ++ GS R G G + G G R R + S HS+S G+
Sbjct: 2154 GSSSRYGQHGSGSRQSSGH------------GRQGSGSGHSPSRGRHGSGSGHSSSHGQH 2201
Query: 284 TGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDL 343
G S R P ++ + + S S A +Q G G G+
Sbjct: 2202 -GSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQS 2260
Query: 344 STAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARL 403
ST ++E +G++ Q +++ +G G+ + +PSR R G
Sbjct: 2261 STFDQEGSSTGQSSSHGQHGSGSSQSSSYG-QQGSGSGQSPSRGRHGS------------ 2307
Query: 404 RGGGGGSGLTQLVGS-GRGSGVTHSVGTHALATRRGS 439
GSG + G G GSG + S G H + + S
Sbjct: 2308 -----GSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSS 2339
Score = 48.9 bits (115), Expect = 1e-05
Identities = 115/504 (22%), Positives = 173/504 (34%), Gaps = 80/504 (15%)
Query: 53 GSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRR--- 109
GS S ++ G G + G + +G+A+ SG Q +S +++ +G+
Sbjct: 354 GSGQSSGYSKHGSGSGHSSSQG----QHGSTSGQASSSG---QHGSSSRQSSSYGQHESA 406
Query: 110 SRRAAGPGLDCAGSAPAPSGAQ--SCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGT 167
SR ++G G +GS +P Q S G +P+S G GR S SGP
Sbjct: 407 SRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQH--------GTGFGRSSSSGPYVS- 457
Query: 168 PGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAG 227
G G SS G + SS G GSG +HG +G
Sbjct: 458 -GSGYSSGFGHH-------------ESSSEHSSGYTQHGSGSGHSSGH----GQHGSRSG 499
Query: 228 ARAQVRGSEKRACPGSTLPPSSVLAGC---VGTRARGHGGVQ-----RQRFSAPSSHSTS 279
+ RG + + GS+ +G +G G G Q R R + S S+S
Sbjct: 500 QSS--RGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSS 557
Query: 280 GGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAV 339
G P G S R P ++ + S S Q G G+
Sbjct: 558 YG-PHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGST 616
Query: 340 RTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAP 399
S+ + SG++ Q +++ R+G G+ + +PSR R G
Sbjct: 617 SGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYG-QQGSGSGQSPSRGRHGSDF------ 669
Query: 400 PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSS 459
G S Q G GSG + S G H + + S G + + S
Sbjct: 670 -------GHSSSYGQ---HGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGY-----S 714
Query: 460 PAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGG 519
S R G R G S Q ++ L S +H G +G G G
Sbjct: 715 QHGSGSSHSSGYRKHGSRSGQSSRS-EQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSG 773
Query: 520 SQP-------FAGRRAERGKRGAG 536
P +G + G+ G+G
Sbjct: 774 HSPSRVRHGSSSGHSSSHGQHGSG 797
Score = 47.0 bits (110), Expect = 5e-05
Identities = 87/388 (22%), Positives = 139/388 (35%), Gaps = 47/388 (12%)
Query: 56 TDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAG 115
+ S H+ G T S + +G+++ G + + G S ++ G
Sbjct: 1538 SSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPG 1597
Query: 116 PGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSR 175
G +GS +PS + G +S+ G G G SG G+SS
Sbjct: 1598 HGQRGSGSRQSPSYGRHGSGSGRSSS--------SGQHGSGLGESSGFGHHESSSGQSSS 1649
Query: 176 AGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGS 235
+ GS G S +G G+ + RHG ++ R S
Sbjct: 1650 YS--------------QHGSG---SGHSSGYGQHGSRSGQSSRGERHGSSS------RSS 1686
Query: 236 EKRACPGSTLPPSSVLAGCVGTRARGHGGVQ---RQRFSAPSSHSTSGGRPTGERSSREP 292
+ GS SS G +G G Q R R + HS+S G+ G S R
Sbjct: 1687 SRYGQHGSGSRQSS------GHGRQGSGSGQSPSRGRHGSGLGHSSSHGQ-HGSGSGRSS 1739
Query: 293 LLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPR 352
P ++ + + S S A +Q G G G+ ST ++E
Sbjct: 1740 SRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSS 1799
Query: 353 SGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGL 412
+G++ Q +++ + G G+ + +PSR R G GS + G GSG
Sbjct: 1800 TGQSSSHGQHGSGSSQSSSY-GQQGSGSGQSPSRGRHGS----GSGHSSSYGQHGSGSGW 1854
Query: 413 TQLVG-SGRGSGVTHSVGTHALATRRGS 439
+ G G GSG + G H ++ + S
Sbjct: 1855 SSSSGRHGSGSGQSSGFGHHESSSWQSS 1882
Score = 45.8 bits (107), Expect = 1e-04
Identities = 99/397 (24%), Positives = 141/397 (35%), Gaps = 53/397 (13%)
Query: 71 RPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGA 130
R SGS + G + PSR R G S ++ G +GS + S
Sbjct: 1339 RGSGSSQSSGYGRHGAGSGQSPSRGRH---------GSGSGHSSSYGQHGSGSGWSSSSG 1389
Query: 131 QSCGGPAPASAL-RRPLTQWDASG----GGGRGSHSGPRAGTPGGGRSSRAGARRKTPLS 185
+ G +S + W +SG G G G S G+SSR G R +
Sbjct: 1390 RHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSR-GERHGSSSG 1448
Query: 186 LCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQV----RGSEKRACP 241
+ GS R Q LG GSG+ P RHG +G + GS +
Sbjct: 1449 SSSSYGQHGSGSR-QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSR 1507
Query: 242 GSTLPPSSVLAGCVGTRAR-GHGGVQRQRFSAPSSHSTSG--GRPTGERSSREPLLDPSK 298
G SS +G +R G Q S+ ST G G +G+ SS +
Sbjct: 1508 GPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS------CGQ 1561
Query: 299 AARASALPTARVAHASPPSLAAAQWRLGGGKRKPT--VLKGAVRTDLSTAEEEDPRSGRA 356
+S ++ H S S ++ R G G + +G+ + SGR+
Sbjct: 1562 HGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRS 1621
Query: 357 LEPAQ-GSELWARA---------------ERHGGSSGARTLPTPSRARPGKPA---PRGS 397
Q GS L + +HG SG + +R G+ + GS
Sbjct: 1622 SSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGS 1681
Query: 398 APPARLRGGGGGSGLTQLVGSGR---GSGVTHSVGTH 431
+ + R G GSG Q G GR GSG + S G H
Sbjct: 1682 SSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRH 1718
Score = 45.8 bits (107), Expect = 1e-04
Identities = 90/374 (24%), Positives = 131/374 (35%), Gaps = 53/374 (14%)
Query: 56 TDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAG 115
+ S H+ G T S + +G+++ G + + G S ++ G
Sbjct: 2478 SSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPG 2537
Query: 116 PGLDCAGSAPAPS-GAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG----TPGG 170
G +GS +PS G G +S+ + ++SG G S SG + G
Sbjct: 2538 HGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGS 2597
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARA 230
G SS G R G S R + GSS G S H G G+ +
Sbjct: 2598 GHSSGYGQHGS----------RSGQSSRGERHGSSSGSSS-----------HYGQHGSGS 2636
Query: 231 QVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSR 290
+ R GS PS RG G S+ H + GR SSR
Sbjct: 2637 RQSSGHGRQGSGSGQSPS-----------RGRHGSGLGHSSSHGQHGSGSGR----SSSR 2681
Query: 291 EPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEED 350
P S+ +S + S S A +Q G G G+ ST ++E
Sbjct: 2682 GPY--ESRLGHSSVF--GQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEG 2737
Query: 351 PRSGRAL---EPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGG 407
+G++ GS + RHG SG + S R G + + S+ G G
Sbjct: 2738 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSG----QSLSHGRHGSGSGQSSSYGQHGSGSG 2793
Query: 408 GGSGLTQLVGSGRG 421
SG +Q GSG G
Sbjct: 2794 QSSGYSQ-HGSGSG 2806
Score = 44.3 bits (103), Expect = 3e-04
Identities = 104/457 (22%), Positives = 154/457 (33%), Gaps = 80/457 (17%)
Query: 22 SLGEKALTALSHQNPEFPQIARNDCWDRVPRGSVTDSNHTPAGLDCGPTRPSGSLTTRRP 81
SLG + S Q+P P R++ GS S++ P G SG ++R P
Sbjct: 527 SLGHSRHGSGSGQSPS-PSRGRHES------GSRQSSSYGPHGYG------SGRSSSRGP 573
Query: 82 RDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSG-AQSCGGPAPAS 140
++G SG Q S +++ +G+ + G + SG + SCG S
Sbjct: 574 YESGSGHSSGLGHQESRS-GQSSGYGQHGSSSGHSSTH--GQHGSTSGQSSSCGQHGATS 630
Query: 141 ALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQ 200
Q + G G GS R G G G R SS
Sbjct: 631 G------QSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGS------DFGHSSSYGQH 678
Query: 201 GLGSSWGGSGTP----------------PPPRALWNRHGGAA---------GARAQVRGS 235
G GS W S P + +++HG + G+R+
Sbjct: 679 GSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSR 738
Query: 236 EKRACPGSTLPPSSVLAGCVGTRARGHG--------GVQRQRFSAPSSHSTSGGRP-TGE 286
++ S L S G ++ GHG R R + S HS+S G+ +G
Sbjct: 739 SEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGT 798
Query: 287 RSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTA 346
S S + +AS H S +Q G G+ S++
Sbjct: 799 SCSSSCGHYESGSGQASGFGQ----HESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSS 854
Query: 347 EEEDPRSGRALEPAQGSELWARAE---RHG---------GSSGARTLPTPSRARPGKPAP 394
+ D SG++ Q A RHG G G+ + +PS R G +
Sbjct: 855 GQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSG 914
Query: 395 RGSAPPARLRGGGGGSGLTQLVGSGRGSGVT-HSVGT 430
R S+ G G SG SG+ SG T H G+
Sbjct: 915 RSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGS 951
Score = 43.1 bits (100), Expect = 7e-04
Identities = 85/341 (24%), Positives = 120/341 (35%), Gaps = 46/341 (13%)
Query: 99 SRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRG 158
S +R G SR+++G G +GS +PS + G +S + G GR
Sbjct: 2155 SSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSS------SHGQHGSGSGRS 2208
Query: 159 SHSGP---RAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPP 215
S GP R+G +G+ + S + GS C S G G+
Sbjct: 2209 SSRGPYESRSGHSSVFGQHESGSGHSSAYS----QHGSGSGHFC-----SQGQHGSTSGQ 2259
Query: 216 RALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHG-GVQRQRFSAPS 274
+ +++ G + G S GS SS G + G G R R + S
Sbjct: 2260 SSTFDQEGSSTGQ------SSSHGQHGSGSSQSS----SYGQQGSGSGQSPSRGRHGSGS 2309
Query: 275 SHSTS-GGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPT 333
HS+S G +G S S + ++S +S S Q G G
Sbjct: 2310 GHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGF--GHHESSSWQSSGYTQHGSGSGHSSSY 2367
Query: 334 VLKGAVRTDLSTAEEEDPRSGRALEPAQ---GSELWARAERHGGSSGARTLPTPSRARPG 390
G+ S E SG + Q GS +HG SG P+PSR R G
Sbjct: 2368 EQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQS--PSPSRGRHG 2425
Query: 391 KPAPRGSAPPARLRGGGGGSGLTQL-----VGSGRGSGVTH 426
GS + G GSG + GSG SG+ H
Sbjct: 2426 S----GSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGH 2462
Score = 43.1 bits (100), Expect = 7e-04
Identities = 89/391 (22%), Positives = 132/391 (33%), Gaps = 45/391 (11%)
Query: 73 SGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQS 132
SGS + G + PSR R G S ++ G +GS + S +
Sbjct: 2281 SGSSQSSSYGQQGSGSGQSPSRGRH---------GSGSGHSSSYGQHGSGSGWSSSSGRH 2331
Query: 133 CGGPAPASAL-RRPLTQWDASG----GGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLC 187
G +S + W +SG G G G S G+SSR G R +
Sbjct: 2332 GSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSR-GERHGSSSGSS 2390
Query: 188 PLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPP 247
+ GS R Q LG GSG+ P RHG +G + + S+ P
Sbjct: 2391 SSYGQHGSGSR-QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGP 2449
Query: 248 SSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPT-----GERSSREPLLDPSKAARA 302
+G + GH + + S H +S G + G S + A+
Sbjct: 2450 YE--SGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSG 2507
Query: 303 SALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQ- 361
+ + S S + G G+ +G+ + SGR+ Q
Sbjct: 2508 QSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQH 2567
Query: 362 GSELWARA---------------ERHGGSSGARTLPTPSRARPGKPA---PRGSAPPARL 403
GS L + +HG SG + +R G+ + GS+ +
Sbjct: 2568 GSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSS 2627
Query: 404 RGGGGGSGLTQLVGSGR---GSGVTHSVGTH 431
G GSG Q G GR GSG + S G H
Sbjct: 2628 HYGQHGSGSRQSSGHGRQGSGSGQSPSRGRH 2658
Score = 41.6 bits (96), Expect = 0.002
Identities = 102/480 (21%), Positives = 159/480 (33%), Gaps = 85/480 (17%)
Query: 93 SRQRRTSRARTALWGRR---SRRAAGPGLDCAGSAPAPSGAQSCGGPAPASA-------- 141
S Q + +++ +G + S +++G G +GS +P+ Q G +S+
Sbjct: 166 SGQHNSYSGQSSSYGEQNSDSHQSSGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGS 225
Query: 142 ------LRRPLTQWDASGGGGRGSHSGPRAGT----PGGGRSSRAGARRKTPLSLCPLKL 191
+ + +SG GS SG +G G+SSR G R ++
Sbjct: 226 GQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSR-GERHRSSSGSSSSYG 284
Query: 192 RKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVL 251
+ GS R Q LG GSG+ P + RHG +G S GS
Sbjct: 285 QHGSGSR-QSLGHGRQGSGSRQSPSHV--RHGSGSG------HSSSHGQHGS-------- 327
Query: 252 AGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVA 311
G + +RGH + S H + G+ +G SK S +++
Sbjct: 328 -GSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGY----------SKHGSGSGHSSSQGQ 376
Query: 312 HASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAER 371
H S A++ + G R+ + ++ SG P G +
Sbjct: 377 HGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHG--------Q 428
Query: 372 HGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGS----------GRG 421
G SG +PS + G R S+ + G G SG S G G
Sbjct: 429 RGSGSG----QSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSG 484
Query: 422 SGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAG 481
SG + G H + + SR R + S + QS S R G+G
Sbjct: 485 SGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHS--------RHGSG 536
Query: 482 RLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEG-----CGGGSQPFAGRRAERGKRGAG 536
P R G + H +G R G G G + R + +G
Sbjct: 537 SGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSG 596
Score = 41.6 bits (96), Expect = 0.002
Identities = 88/402 (21%), Positives = 136/402 (33%), Gaps = 46/402 (11%)
Query: 68 GPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAP 127
G T S + + +G+++ G + G S ++ G G +GS +P
Sbjct: 845 GSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP 904
Query: 128 SGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG-TPGG---------------- 170
S + G +S+ R + S G G S SG +G T G
Sbjct: 905 SYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRS 964
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARA 230
G+SSR+ + S SR Q LG GSG+ P RHG +G +
Sbjct: 965 GQSSRSEQHGSSSGSSSSYGQHGSGSR--QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS 1022
Query: 231 QVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPT-----G 285
R+ G + +G + GH + + S H +S G + G
Sbjct: 1023 SY--GPYRSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG 1080
Query: 286 ERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLST 345
S + A+ + + S S + G G+ +G+ +
Sbjct: 1081 STSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPS 1140
Query: 346 AEEEDPRSGRALEPAQ-GSELWARA---------------ERHGGSSGARTLPTPSRARP 389
SGR+ Q GS L + +HG SG + +R
Sbjct: 1141 YGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS 1200
Query: 390 GKPA---PRGSAPPARLRGGGGGSGLTQLVGSGR-GSGVTHS 427
G+ + GS+ + G GSG Q G GR GSG HS
Sbjct: 1201 GQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHS 1242
Score = 40.8 bits (94), Expect = 0.003
Identities = 81/344 (23%), Positives = 127/344 (36%), Gaps = 31/344 (9%)
Query: 90 SGPSRQRRTSRARTALWGRR---SRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPL 146
S + R+S ++ +G+ SR++ G G +GS +PS + G +S+ +
Sbjct: 267 SSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHG 326
Query: 147 TQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSW 206
+ +S RG + T G G+ +G+ + + S + GS G SS
Sbjct: 327 S--GSSYSYSRGHYESGSGQTSGFGQ-HESGSGQSSGYS------KHGSG---SGHSSSQ 374
Query: 207 GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQ 266
G G+ + +HG ++ + E + S S +G ++ GHG Q
Sbjct: 375 GQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSG----QSPGHG--Q 428
Query: 267 RQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLG 326
R S S S G G SS P + S + + H+S Q G
Sbjct: 429 RGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSS----GYTQHGSG 484
Query: 327 GGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQ---GSELWARAERHGGSSGARTLPT 383
G G+ S E + +G + Q GS RHG SG P+
Sbjct: 485 SGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQS--PS 542
Query: 384 PSRARPGKPAPRGSAPPARLRGGGGGSGLTQL-VGSGRGSGVTH 426
PSR R + + S+ G G S GSG SG+ H
Sbjct: 543 PSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGH 586
Score = 37.4 bits (85), Expect = 0.037
Identities = 80/345 (23%), Positives = 114/345 (33%), Gaps = 61/345 (17%)
Query: 107 GRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG 166
G SR+++G G +GS +PS + G G G S
Sbjct: 1223 GSGSRQSSGHGRQGSGSGHSPSRGRH---------------------GSGLGHSSSHGQH 1261
Query: 167 TPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAA 226
G GRSS G P + R G S G GSG + +++HG +
Sbjct: 1262 GSGSGRSSSRG----------PYESRSGHS---SVFGQHESGSGHS----SAYSQHGSGS 1304
Query: 227 GARAQVRGSEKRACPGSTLPPSSVLAGCVGTRA-RGHGGVQRQ---RFSAPSSHSTSGGR 282
G + ST G + RG G Q R A S S S GR
Sbjct: 1305 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGR 1364
Query: 283 PTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTD 342
G S + + + R S S + G+
Sbjct: 1365 H-GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGH 1423
Query: 343 LSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTL----PTPSRARPGKP---APR 395
S+ E+ RSG++ +R ERHG SSG+ + + SR G +
Sbjct: 1424 SSSYEQHGSRSGQS----------SRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGS 1473
Query: 396 GSAP-PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGS 439
G +P P+R R G G + G GSG + S G + + S
Sbjct: 1474 GQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSS 1518
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 53.1 bits (126), Expect = 6e-07
Identities = 95/365 (26%), Positives = 117/365 (32%), Gaps = 66/365 (18%)
Query: 120 CAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGG--------GRGSHSGPRA-GTPGG 170
C G PS GP A RRP GGG GSH+ P G PG
Sbjct: 35 CCGRRSLPS----VSGPVRGRAERRPARGKHVRGGGVGGCRDSRAGGSHAAPSGLGVPGD 90
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPR--ALWNRHGGAAGA 228
S+ P SL + + G + R +S +G PP R A + GA+
Sbjct: 91 SESALGLLEPGPPKSL-RISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKR 149
Query: 229 RAQVRGSEKR-----ACPGSTLPPSSVL----AGCVGTRARGHGGVQRQRFSAPSSHSTS 279
R R +R C G+ P + L G G +R + S S S
Sbjct: 150 RESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLS 209
Query: 280 GGRPTGERSS-REPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVL--- 335
G P SS E L A A A A+PP + W L PT L
Sbjct: 210 PGPPLQRSSSLNETLRGRRPPGPAPAAAGATRGTAAPPGRDPSAWFLDSASACPTPLAAR 269
Query: 336 --------------KGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTL 381
KGA E RA EP G E R +T
Sbjct: 270 SWHPFVANKLCGRGKGAGGGASRPKEGVGSGRARAWEPRGGRESGRSRRRKSLLEDLQTE 329
Query: 382 PT--PSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGS 439
T PSR P +P+ R S P +G TH+ A R +
Sbjct: 330 ATLWPSREVPREPS-RPSCP--------------------QGVAETHTTAERAQLRRLAA 368
Query: 440 RAPRP 444
RAPRP
Sbjct: 369 RAPRP 373
Score = 32.3 bits (72), Expect = 1.2
Identities = 58/225 (25%), Positives = 76/225 (33%), Gaps = 17/225 (7%)
Query: 232 VRG-SEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSR 290
VRG +E+R G + V GC +RA G S S G G S
Sbjct: 48 VRGRAERRPARGKHVRGGGV-GGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPGPPKSL 106
Query: 291 EPLLDPSKAARAS-ALPTARVAHASPPSLAAAQ--WRLGGGKRKPTVLKGAVRTDLSTAE 347
+ +A RA + ++ A +PPS A+ R G KR+ + RTD
Sbjct: 107 RISVTLGQAPRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKRRESW-----RTDGERLR 161
Query: 348 EEDPRSGRALEPAQG----SELWARAERHGGSSGARTLP---TPSRARPGKPAPRGSAPP 400
+G A P E W RA G R P S PG P R S+
Sbjct: 162 SGRGCAGAARGPDASLDTRREGWPRAAVVGRHEARRLKPGVSVSSSLSPGPPLQRSSSLN 221
Query: 401 ARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPV 445
LRG G+ RG+ A S P P+
Sbjct: 222 ETLRGRRPPGPAPAAAGATRGTAAPPGRDPSAWFLDSASACPTPL 266
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 53.1 bits (126), Expect = 6e-07
Identities = 102/405 (25%), Positives = 136/405 (33%), Gaps = 66/405 (16%)
Query: 60 HTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLD 119
H G G R SGS R P +G + P R + + A GR + P
Sbjct: 282 HRDEGRKTGSQRSSGS---RSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKP 338
Query: 120 ----------CAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPG 169
A +AP P A+ P+P SA A+GG GR R
Sbjct: 339 SSPSPRVRDKAAAAAPTPP-ARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSR 397
Query: 170 GGRSS--RAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTP-PPPRALWNRHGGAA 226
S+ R G RR P P + S R + S G G P P P R G
Sbjct: 398 SSASAPRRRGRRRPRP---APPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGH 454
Query: 227 GARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGE 286
G RA+ R RA P ST P +P +H GG P G+
Sbjct: 455 GKRAKER--PPRARPASTSP-------------------------SPGAHGRRGG-PEGK 486
Query: 287 RSSREPLLDPS--KAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVR--TD 342
SSR P P ++R+ + +R A P S R P+ K R
Sbjct: 487 SSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHS----------PSRSPSPKKPLSRDKDG 536
Query: 343 LSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARP---GKPAPRGSAP 399
A + + RA ++ + R S T +R RP +P+P S+
Sbjct: 537 EGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSS 596
Query: 400 PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRP 444
+ G GS + S GT + TR SR P P
Sbjct: 597 CLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTRS-RTRSPSRTPSP 640
Score = 49.7 bits (117), Expect = 7e-06
Identities = 83/339 (24%), Positives = 121/339 (35%), Gaps = 63/339 (18%)
Query: 206 WGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGV 265
W S PPP+ + GG +R + R + +C S+ + R R G
Sbjct: 159 WSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRKKKKSVKKHRRDRSDSGS 218
Query: 266 QRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRL 325
+R+R S S+ R + + P R S ++ +H+ PSL++
Sbjct: 219 RRKR--RHRSRSSKCKRKEKNKEKKRP--HTESPGRRSHRHSSGSSHS--PSLSSHY--- 269
Query: 326 GGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGS---------- 375
R P+ L R + + R+ P+ GS W +R+GGS
Sbjct: 270 -SDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSG-WGSPQRNGGSGQRSGAHGGR 327
Query: 376 --------------------SGARTLPTPSRARPGKPAPRGSAPPARLRGG--GGGSGLT 413
A PTP P+PR SAP ++ RGG GG+G
Sbjct: 328 PGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPR-SAPSSQGRGGRAAGGAGRR 386
Query: 414 QLVGSGRGSGVTHSVGTHALATRRGSRAPRPV---GVLRGVPHFRPLSSP-----APQSP 465
+ R S + + RRG R PRP G R + R S AP
Sbjct: 387 R----RRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPG 442
Query: 466 PRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSP 504
P S R G G G+ + + PRA A +PSP
Sbjct: 443 PEPGSERGHG---GHGKRAKERPPRARP----ASTSPSP 474
>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1934
Score = 52.8 bits (125), Expect = 8e-07
Identities = 137/494 (27%), Positives = 179/494 (36%), Gaps = 77/494 (15%)
Query: 87 AAVSGPSRQRRT-SRARTALWGRRS--RRAAGPGLDC-------AGSAPAPSGAQSCGGP 136
A +SG SR RR + +AL G RS RA P C A A AP+ GG
Sbjct: 202 AMLSGRSRARRAIAPTPSALRGYRSWAHRAIAPTPGCLYSDRSRAHRAIAPARGTKHGGR 261
Query: 137 APASALRRPLTQWDASGGGGRGSHS---GPRAGTPGGGRSSRAGARRKTPLSLCPLKLRK 193
+ A R + S G R S P G GGRS A TP SLC
Sbjct: 262 SWAC---RSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRAHRAIAPTPGSLC-----G 313
Query: 194 GSSRRCQGLGSSWG-----GSGTP----PPPRALWNRHGGAAGARAQVRGSEK--RACPG 242
SR C + + G S P P P AL A A G+ + R+
Sbjct: 314 NRSRACGAIALTPGVLCGVRSRVPKDITPTPGALRGYKSWVCRAIAPTPGALRGDRSAAR 373
Query: 243 STLPPSSVLAGCVGTRARG-----HGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPS 297
+ + + G +RAR G +Q R S + + + G G+RS+ P+
Sbjct: 374 TAIVRTPGALGRDRSRARSAIASTPGTLQGNRSSVSKAIAPAPGALRGDRSAARTAFVPT 433
Query: 298 KAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEE---EDPRSG 354
A AR A AS P PT GA+R S A +P +
Sbjct: 434 PGALHRDRSRARSAIASTPGTLRGNTSSACKAIAPT--PGALRGYKSWARRAIAPNPGAW 491
Query: 355 RALEPAQGSELWARAERHGGS-SGART--LPTPSRARPGKPAPRG--SAPPARLRG--GG 407
R G+ + GG+ S ART PTP R +P R ++ PA LRG
Sbjct: 492 RGYRSTTGTAIAPNLGALGGNRSAARTDIAPTPGALRGYRPRSRRAIASTPATLRGEKSR 551
Query: 408 GGSGLTQLVGSGRGSG-------VTHSVGTHALATRRG-SRAPRPVGVLRGVPHFRPLSS 459
+ L G+ RG G V + + +R G AP + R P R +
Sbjct: 552 AHTSLAPAPGALRGDGSRARRAIVPTTCPLCEIWSRVGIGIAPIADALRRDRPPVRRAIA 611
Query: 460 PAPQS--PPRSPSVRAFGPRLGAGRLSCPQAPRA-AALPGI---------AVLAPSPAHD 507
P P + RS + A P GA A RA A PG +AP+P
Sbjct: 612 PTPGALRCDRSRELTAIDPTPGALCSDRSGASRAIAPTPGTLCSERSRVRRAIAPTP--- 668
Query: 508 WGGQRCEGCGGGSQ 521
C CG GSQ
Sbjct: 669 -----CALCGKGSQ 677
Score = 32.0 bits (71), Expect = 1.5
Identities = 62/227 (27%), Positives = 77/227 (33%), Gaps = 46/227 (20%)
Query: 327 GGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEP---AQGSELWARAERHGGSS------G 377
GG RKP L+ + LS E P S E +G + +R SS
Sbjct: 104 GGGRKPHELESTTPSQLSQKVPEKPASSVPREDDWRCKGDLRRSLGKRENPSSPTVPSES 163
Query: 378 ARTL------------PTPSRARPG--KPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSG 423
R L PTP A PG APR AP G + +
Sbjct: 164 KRALRDDRSQEPTAIAPTPG-ALPGDRSGAPRAIAPTPGAMLSGRSRARRAIAPTPSALR 222
Query: 424 VTHSVGTHALATRRG------SRAPRPVGVLRGVPH------FRPLS-SPAPQSPPRSPS 470
S A+A G SRA R + RG H R ++ P RS +
Sbjct: 223 GYRSWAHRAIAPTPGCLYSDRSRAHRAIAPARGTKHGGRSWACRSIAPKPGSLCGDRSQA 282
Query: 471 VRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCG 517
RA P LGA R +A RA +AP+P G R CG
Sbjct: 283 SRAIDPTLGARRGGRSRAHRA--------IAPTPG-SLCGNRSRACG 320
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 52.4 bits (124), Expect = 1e-06
Identities = 115/430 (26%), Positives = 144/430 (33%), Gaps = 71/430 (16%)
Query: 162 GPR--AGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALW 219
GP+ A P R+S A R P + R G GLGS W P RA+
Sbjct: 92 GPKSWAPAPRRQRASSAQVRAARPAGMAAGTGRSGPGSARLGLGSGW------DPARAVA 145
Query: 220 NRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVG--TRARGHGGVQRQRFSAPSSHS 277
R A GA R A G P + G A G +RQR P+
Sbjct: 146 PRAARALGAALFGRAVHTAALSG---PHCRLRCGARAFYAAAGGASSRRRQRGRNPALIV 202
Query: 278 TS-GGRPTGERSSREPLLDPSKAARASALPTARVAHASP------PSLAAAQWRLGGGKR 330
G R G +S P L P AS P + P P+L + R GK
Sbjct: 203 RGPGPRRGGGLTSAPPGLPP----LASPPPFWELPRPPPPPPPPGPALLPRRLRELRGKE 258
Query: 331 ---------------KPTVLKGAVRTDLSTAEEEDPRSG-----RALEPAQ-GSELWARA 369
P + +G+ R E + S L P G+ L A+
Sbjct: 259 VGLRPRTRGWTTCVVSPNLRRGSRRAGNHRVREIEFGSALLAALNTLGPGSFGAGLGAQG 318
Query: 370 ER---------HGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 420
R +G G +P R PG+PA S P G GL+ GR
Sbjct: 319 PRSSTPECPVVNGSEWGLAAPLSPERGSPGRPAFLRS--PGLCGPGPVPGGLSVPTPCGR 376
Query: 421 GSGVTHSV----------GTHALATRRGSRAPRPVGVLR-GVPHFRPLSSPA--PQSPPR 467
G+G G +A RR R LR G P +P +SPA P PR
Sbjct: 377 GAGDFSEADLADRAFPVRGAGPIAGRRRRRGWTFAAALRKGAPREQPPASPAASPCQAPR 436
Query: 468 SPSVRAFGPRL-GAGRLSCPQ-APRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAG 525
+P PRL G P+ P A G+ VL P PA G G P
Sbjct: 437 APEKETEAPRLRGRATAVAPRPLPAAPGFSGLCVLQPFPARSRGLGVPSQQGPTGSPGCR 496
Query: 526 RRAERGKRGA 535
RA + GA
Sbjct: 497 DRASAPRAGA 506
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 51.2 bits (121), Expect = 2e-06
Identities = 127/491 (25%), Positives = 158/491 (32%), Gaps = 67/491 (13%)
Query: 68 GPTRPSGSLTTRRP--RDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAP 125
GP P G L P R+ GE G R + L G R G++ P
Sbjct: 1700 GPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGP-KGDPGLPGAPGER----GIEGFRGPP 1754
Query: 126 APSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGP--------RAGTPGGGRSSRAG 177
P G GPA R P SG G+ +GP +AG P GR G
Sbjct: 1755 GPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDP--GRDGLPG 1812
Query: 178 ARRKTPL---SLCPLKLRKGSSRRCQGLGSSWGGSGTP-PPPRALWNRHGGAAGARAQVR 233
R + L S P K GL G G P R GA+G +
Sbjct: 1813 LRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDG 1872
Query: 234 GSEKRACPGSTLPPSSV-LAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREP 292
+R PG P L G VG +G GV G P G+R
Sbjct: 1873 PKGERGAPGILGPQGPPGLPGPVGPPGQGFPGV------------PGGTGPKGDRGE--- 1917
Query: 293 LLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRT--DLSTAEEED 350
+ + LP R P S+ L K + L+ V T + S +
Sbjct: 1918 ----TGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPV 1973
Query: 351 PRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAP-------RGSAPPARL 403
P R + G + E G G R L R PG P RG P+ L
Sbjct: 1974 PERRRGPKGDSGEQGPPGKEGPIGFPGERGL-KGDRGDPGPQGPPGLALGERGPPGPSGL 2032
Query: 404 RGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQ 463
G G G+ L G G G G +G R + G+P +P P
Sbjct: 2033 AGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLP-----GTPGPP 2087
Query: 464 SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPF 523
PP P V P G LS Q P PG+ P + G Q +G G
Sbjct: 2088 GPP-GPKVSVDEPGPG---LSGEQGP-----PGLKGAKGEPGSN-GDQGPKG-DRGVPGI 2136
Query: 524 AGRRAERGKRG 534
G R E G RG
Sbjct: 2137 KGDRGEPGPRG 2147
Score = 48.5 bits (114), Expect = 2e-05
Identities = 113/423 (26%), Positives = 133/423 (31%), Gaps = 85/423 (20%)
Query: 116 PGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSR 175
PGL P P G GP A L P SG G +GP PG G +
Sbjct: 2167 PGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGP----PGRGLTGP 2222
Query: 176 AGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGS 235
GA GL G SG P G+ G QV +
Sbjct: 2223 TGA---------------------VGLPGPPGPSGLVGPQ--------GSPGLPGQVGET 2253
Query: 236 EKRACPGSTLPPSSVLAGCVGTRA-RGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLL 294
K PG G G RG GV P S G P G + P
Sbjct: 2254 GKPGAPGRD--------GASGKDGDRGSPGV-------PGSPGLPG--PVGPKGEPGPTG 2296
Query: 295 DPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSG 354
P +A LP A+ +P LA G K L E +G
Sbjct: 2297 APGQA--VVGLPGAKGEKGAPGGLAGDLVGEPGAKGD---------RGLPGPRGEKGEAG 2345
Query: 355 RALEPAQGSELWARAERHGGSSGARTLP-TPSRARPGKPAPRGSAPPARLRGGGGGSGLT 413
RA EP E + G+ G + P PG P P G PP G G GL
Sbjct: 2346 RAGEPGDPGE-----DGQKGAPGPKGFKGDPGVGVPGSPGPPG--PP----GVKGDLGLP 2394
Query: 414 QLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRA 473
L G+ GV G G P L G P + P P PP P +
Sbjct: 2395 GLPGA---PGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGI--PGPLGPPGPPG--S 2447
Query: 474 FGPRLGAGRLSCPQAPRAAALPGIAVLAPSPA--HDWGGQRCEGCGGGSQPFAGRRAERG 531
GP GA L + LPG P + G EG G + P G R ERG
Sbjct: 2448 VGPP-GASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGP-PGSRGERG 2505
Query: 532 KRG 534
++G
Sbjct: 2506 EKG 2508
Score = 45.1 bits (105), Expect = 2e-04
Identities = 56/193 (29%), Positives = 68/193 (35%), Gaps = 33/193 (17%)
Query: 360 AQGSELWARAERHGGSSGARTLP-TPS----RARPGKPAPRGSAPPARLRGGGGGSGLTQ 414
A+G + A+ GS G P TP + PG P PRG RG G G
Sbjct: 1294 AKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAPG 1353
Query: 415 LVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAF 474
V G G G L R+G P RG PL P P+ PP P
Sbjct: 1354 QVIGGEGPG---------LPGRKGDPGPSGPPGPRG-----PLGDPGPRGPPGLPGTAMK 1399
Query: 475 GPRLGAGRLSCPQ------APRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFA---- 524
G + G P AP LPG+ +P P G +G G S+ A
Sbjct: 1400 GDKGDRGERGPPGPGEGGIAPGEPGLPGLPG-SPGPQGPVGPPGKKGEKGDSEDGAPGLP 1458
Query: 525 ---GRRAERGKRG 534
G E+G RG
Sbjct: 1459 GQPGSPGEQGPRG 1471
Score = 34.7 bits (78), Expect = 0.24
Identities = 121/490 (24%), Positives = 156/490 (31%), Gaps = 79/490 (16%)
Query: 62 PAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCA 121
P GL GP P G P G G + S+ L G R R
Sbjct: 1888 PPGLP-GPVGPPGQGFPGVPGGTGPKGDRGETG----SKGEQGLPGERGLRGE------P 1936
Query: 122 GSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRK 181
GS P G ASALR + WD S G R P G + ++
Sbjct: 1937 GSVPNVDRLLETAG-IKASALREIVETWDESSGSFLPVPERRRG--PKGDSGEQGPPGKE 1993
Query: 182 TPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACP 241
P+ G +GL G G PP G A G R S P
Sbjct: 1994 GPIGF------PGE----RGLKGDRGDPGPQGPP-------GLALGERGPPGPSGLAGEP 2036
Query: 242 GSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAAR 301
G P L G RA G G GRP GER R + + R
Sbjct: 2037 GKPGIPG--LPG----RAGGVG---------------EAGRP-GERGERGEKGERGEQGR 2074
Query: 302 AS--ALPTARVAHASP-PSLAAAQWRLG-GGKRKPTVLKGAVRTDLSTAEEEDPRSGRAL 357
LP P P ++ + G G++ P LKGA + + + ++ P+ R +
Sbjct: 2075 DGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGA-KGEPGSNGDQGPKGDRGV 2133
Query: 358 EPAQGS--ELWARAER-HGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQ 414
+G E R + + G G R + P +PG PRG P G G G
Sbjct: 2134 PGIKGDRGEPGPRGQDGNPGLPGERGMAGPE-GKPGLQGPRGPPGPVGGHGDPGPPGAPG 2192
Query: 415 LVGSGRGSGVTHSVGTHALATRRGSRAPRPVGV--LRGVPHFRPLSSPAPQSPPRSPSVR 472
L G G + G G P G L G P P PQ P P
Sbjct: 2193 LAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPP--GPSGLVGPQGSPGLPGQV 2250
Query: 473 AFGPRLGA-------GRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAG 525
+ GA G+ +P PG+ P P G G G Q G
Sbjct: 2251 GETGKPGAPGRDGASGKDGDRGSPGVPGSPGL----PGPVGPKGEPGPTGAPG--QAVVG 2304
Query: 526 RRAERGKRGA 535
+G++GA
Sbjct: 2305 LPGAKGEKGA 2314
Score = 33.9 bits (76), Expect = 0.41
Identities = 116/474 (24%), Positives = 135/474 (28%), Gaps = 91/474 (19%)
Query: 115 GPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSS 174
GPGL P PSG GP R P + G +G G PG G
Sbjct: 1360 GPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRG--ERGPPGPGEGG 1417
Query: 175 RAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRG 234
A P GL S G G PP + GA
Sbjct: 1418 IAPGEPGLP-----------------GLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQ 1460
Query: 235 SEKRACPGSTLPPSSVLAGCVGTRA----RGHGGVQRQRFSAPSSHSTSGGRP--TGERS 288
G PP ++ G G R G G + +R P + S G P G
Sbjct: 1461 PGSPGEQGPRGPPGAI--GPKGDRGFPGPLGEAGEKGER--GPPGPAGSRGLPGVAGRPG 1516
Query: 289 SREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAV-----RTDL 343
++ P P PT R P +G P KG V R
Sbjct: 1517 AKGPEGPPG--------PTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGAT 1568
Query: 344 STAEEEDPRSGRALEPAQGSE----------LWARAERHGGSSGARTLPTPSRARPGKPA 393
E P G L G + L RA G S P + PG+P
Sbjct: 1569 GVQGERGP-PGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSG-----PPGEKGDPGRPG 1622
Query: 394 PRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVP- 452
P G P RG G G G G+ G L G R P +G P
Sbjct: 1623 PPGPVGP---RGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPG 1679
Query: 453 ----HFRPLSS--------PAPQSPP-----RSPSVR---------AFGPRLGAGRLSCP 486
+ P SS P P PP P R GPR G P
Sbjct: 1680 EDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLP 1739
Query: 487 QAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGGSQP--FAGRRAERGKRGAGVP 538
AP + G P P D G + G G P GR GK GA P
Sbjct: 1740 GAPGERGIEGFRG-PPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGP 1792
Score = 32.3 bits (72), Expect = 1.2
Identities = 88/364 (24%), Positives = 117/364 (32%), Gaps = 58/364 (15%)
Query: 125 PAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA--GTPGGGRSSRAGARRKT 182
P PSG + GP + PL G G SG + G PG G G R +
Sbjct: 2418 PGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEP 2477
Query: 183 PLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPG 242
+ R G G G PP + G G + V + + G
Sbjct: 2478 GI------------RGEDGRPGQEGPRGLTGPPGSR-----GERGEKGDVGSAGLKGDKG 2520
Query: 243 STLPPSSVLAGCVGTR-ARGHGGVQRQR-FSAPSSHSTSGGRPTGERSSREP-------- 292
S+V+ G G R A+G G + R G P + S EP
Sbjct: 2521 D----SAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGL 2576
Query: 293 -----LLDPSKAARASALP--TARVAHASPPSLAAAQWRLG----GGKRKPTVLKGAVRT 341
LL P A+ +P P + + +G G + +KGA
Sbjct: 2577 PGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGL 2636
Query: 342 DLSTAE--EEDPRSGRALEPAQGSELWARAERHGGSSGARTL--PTPSRARPGKPAPRGS 397
D + E P L +G G+ G L P R G+P P+G
Sbjct: 2637 DGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGD 2696
Query: 398 APPARLRGG---GGGSGLTQLVGSGRGSGVTHSV---GTHALATRRGSRAP---RPVGVL 448
RG GG G + GS G SV G L ++G R P R VG
Sbjct: 2697 QGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGA- 2755
Query: 449 RGVP 452
GVP
Sbjct: 2756 PGVP 2759
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 51.2 bits (121), Expect = 2e-06
Identities = 81/296 (27%), Positives = 106/296 (35%), Gaps = 62/296 (20%)
Query: 69 PTRPSGSLTTRRPRDAGEAA--VSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPA 126
P PSG RPR A S P R A++ R+ G A +A A
Sbjct: 288 PAAPSGG----RPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATA 343
Query: 127 PSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLS- 185
+ A SC PAP S P W GR S A + + LS
Sbjct: 344 AAAASSCSSPAPCS----PPESW---------------------GRQSTASSFVDSSLSA 378
Query: 186 --LCPLKLRKGSSRRCQGLGSSW----GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRA 239
L PL+ + +G SW G G+ PR G + +RG+E +
Sbjct: 379 FALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPR------GELDLSMTNLRGAE-GS 431
Query: 240 CPGSTLPPSSVLAGCVGTRARGHGG--VQRQRFSAPSSHSTSGGRPTGERSSREPLLDPS 297
G+ P ARG GG + R++A STSG S EP P
Sbjct: 432 MRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPG 491
Query: 298 KAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRS 353
A S+ P A+ A SPP RL G PT R D +++ +DP S
Sbjct: 492 SADPDSS-PLAKAASPSPP------LRLEGS--PPT------RRDSGSSQSDDPSS 532
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 115 GPGLDCAGSAPAPSGAQSCGG---PAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGG 171
G + G P +G GG P S+ R P T +S G S S PRA PGG
Sbjct: 66 GIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRA--PGGV 123
Query: 172 RSSRAGARRKTP 183
SS AGA R TP
Sbjct: 124 NSSSAGAPRSTP 135
Score = 35.8 bits (81), Expect = 0.11
Identities = 88/384 (22%), Positives = 118/384 (30%), Gaps = 58/384 (15%)
Query: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180
A +A A S + S AP A+ PL + S RG P GG GA
Sbjct: 224 AAAAAAASSSSSAPAAAPPGAI--PLNGF-LSYVQSRGLELKPGGC---GGSGDAFGAAA 277
Query: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPR----------ALWNRHGGAAGARA 230
P S R +G S + +P PR +++ G AG+R
Sbjct: 278 MLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRR 337
Query: 231 QVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQ--------------RQRFSAPSSH 276
+ A + P G ++ V R R
Sbjct: 338 AAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGA 397
Query: 277 STSGGRPTGERSSRE------PLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKR 330
S S RP GER S+E L + ++ AR P AA+ G G R
Sbjct: 398 SCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGR 457
Query: 331 KPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPG 390
P + A ST+ D R+ + EP GS+ + P A P
Sbjct: 458 LPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSP----------GSADPDSSPLAKAASPS 507
Query: 391 KPAPRGSAPPARLRGGGGGS--------GLTQLVGSGRGSGVTHSVGTHALATRRGSRAP 442
P +PP R G S G T L +G T SV R S
Sbjct: 508 PPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTS---TESVLDAVAGQTRDSAVA 564
Query: 443 RPV-GVLRGVPHFRPLSSPAPQSP 465
PV G + P P + P
Sbjct: 565 APVLGAEQSSPEGASQEPPTAEQP 588
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 50.8 bits (120), Expect = 3e-06
Identities = 127/513 (24%), Positives = 159/513 (30%), Gaps = 104/513 (20%)
Query: 41 IARNDCWDRVPRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSR 100
+ + DR PRG + GP P G RD GE +GP
Sbjct: 30 VRKGPAGDRGPRG------------ERGPPGPPG-------RD-GEDGPTGPPGPPGPP- 68
Query: 101 ARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSH 160
L G + + G G+ G P P G GP A+ P +G G
Sbjct: 69 GPPGLGGNFAAQYDGKGV---GLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQ 125
Query: 161 SGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWN 220
+GP G +AG P K + R G + G GTP P
Sbjct: 126 TGPAGARGPAGPPGKAGEDGH------PGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI 179
Query: 221 R-HGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTS 279
R H G G + Q + PG+ P + G G ARG G +R R AP
Sbjct: 180 RGHNGLDGLKGQPGAPGVKGEPGA--PGENGTPGQTG--ARGLPG-ERGRVGAPG----- 229
Query: 280 GGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLG-------GGKRKP 332
P G R S + P + A PP A G G P
Sbjct: 230 ---PAGARG--------SDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGP 278
Query: 333 TVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKP 392
+G V SG P A G+ GA LP + A PG P
Sbjct: 279 AGPRGEVGL--------PGLSGPVGPPGNPG-----ANGLTGAKGAAGLPGVAGA-PGLP 324
Query: 393 APRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVP 452
PRG P G G GL G G + + G A +G P RG
Sbjct: 325 GPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRG-- 382
Query: 453 HFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPG----IAVLAPSPAHDW 508
P PP P +R +P + LPG V+ P
Sbjct: 383 ---PNGEAGSAGPPGPPGLRG--------------SPGSRGLPGADGRAGVMGPP----- 420
Query: 509 GGQRCEGCGG--GSQPFAGRRAERGKRG-AGVP 538
G + G G G AGR E G G G+P
Sbjct: 421 GSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLP 453
Score = 50.8 bits (120), Expect = 3e-06
Identities = 125/495 (25%), Positives = 161/495 (32%), Gaps = 77/495 (15%)
Query: 66 DCGPTRPSGSLTTRRPR-DAGEAAVSGPSRQRRTSRARTALWGRRSRR-----AAGPGLD 119
+ GP P+G PR + G +SGP A L G + A PGL
Sbjct: 272 NAGPAGPAG------PRGEVGLPGLSGPVGPPGNPGAN-GLTGAKGAAGLPGVAGAPGLP 324
Query: 120 CAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPG-GGRSSRAGA 178
P P GA G P SG G +GP+ G PG G + G
Sbjct: 325 GPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQ-GPPGPSGEEGKRGP 383
Query: 179 RRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKR 238
+ + P S +GL + G +G PP + G AG R + +
Sbjct: 384 NGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGS--RGASGPAGVRGPNGDAGRP 441
Query: 239 ACPG----STLPPSSVLAGCVGTRAR-GHGGVQRQRFSAPSSHSTSGGRP--TGERSSRE 291
PG LP S G G G G+ + P + + G P G +
Sbjct: 442 GEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGR--PGPIGPAGARGEPGNIGFPGPKG 499
Query: 292 PLLDPSK----------AARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRT 341
P DP K AR + P PP Q G G++ P G
Sbjct: 500 PTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQG--GKGEQGPPGPPGF--- 554
Query: 342 DLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPS--RARPGKPAPRGSAP 399
G E+ ER G G LP P+ R G P G+A
Sbjct: 555 -----------QGLPGPSGPAGEVGKPGER--GLHGEFGLPGPAGPRGERGPPGESGAAG 601
Query: 400 PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSS 459
P G G SG G+ GV +VGT G P + RG
Sbjct: 602 PTGPIGSRGPSGPPGPDGNKGEPGVVGAVGT------AGPSGPSGLPGERGA-----AGI 650
Query: 460 PAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGG 519
P + P +R G + P A PG AV AP PA G + G G
Sbjct: 651 PGGKGEKGEPGLR--------GEIGNPGRDGARGAPG-AVGAPGPAGATGDRGEAGAAGP 701
Query: 520 SQPFAGRRAERGKRG 534
+ P AG R G+RG
Sbjct: 702 AGP-AGPRGSPGERG 715
Score = 50.1 bits (118), Expect = 5e-06
Identities = 126/459 (27%), Positives = 162/459 (35%), Gaps = 85/459 (18%)
Query: 117 GLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPG----GGR 172
GL A AP P G GP ++ GG+G P G PG G
Sbjct: 514 GLAGARGAPGPDGNNGAQGPPGPQGVQ-----------GGKGEQGPP--GPPGFQGLPGP 560
Query: 173 SSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHG--GAAGARA 230
S AG ++ K R GL +G G P PR G GAAG
Sbjct: 561 SGPAG------------EVGKPGER---GLHGEFGLPG-PAGPRGERGPPGESGAAGPTG 604
Query: 231 QV--RGSEKRACPGSTLPPSSVLAGCVGTRA-RGHGGVQRQRFSAPSSHSTSGGRPTGER 287
+ RG P V+ G VGT G G+ +R +A G P G+
Sbjct: 605 PIGSRGPSGPPGPDGNKGEPGVV-GAVGTAGPSGPSGLPGERGAA--------GIPGGKG 655
Query: 288 SSREPLL--DPSKAARASALPTARVAHASPPSLAAAQWRLGG--GKRKPTVLKGAV--RT 341
EP L + R A A P+ A G G P +G+ R
Sbjct: 656 EKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERG 715
Query: 342 DLSTAEEED--PRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAP 399
++ A +G A +P E A+ + G +G PT G P G
Sbjct: 716 EVGPAGPNGFAGPAGAAGQPGAKGERGAKGPK--GENGV-VGPTGPVGAAGPAGPNGPPG 772
Query: 400 PARLRGGGGGSGLTQLVG-SGR-----GSGVTHSVGTHALATRRGSRAPR----PVGVLR 449
PA RG GG G+T G +GR SG++ G A + G R PR PVG
Sbjct: 773 PAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTG 832
Query: 450 -----GVPHFRPLSSPAPQS----PPRSPSVRAFGPRLGA-GRLSCPQAPRAAALPGI-- 497
G P F P+ ++ PP +P + LGA G L P + LPG+
Sbjct: 833 EVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGL---LGAPGILGLPGSRGERGLPGVAG 889
Query: 498 AVLAPSPAHDWGGQRCEGCGG--GSQPFAGRRAERGKRG 534
AV P P G G G GS G E G+ G
Sbjct: 890 AVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928
Score = 46.6 bits (109), Expect = 6e-05
Identities = 123/488 (25%), Positives = 156/488 (31%), Gaps = 80/488 (16%)
Query: 68 GPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALW--GRRSRRAAGPGLDCAGSAP 125
GP+ PSG P + G A + G ++ R + GR R A PG A AP
Sbjct: 634 GPSGPSGL-----PGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGA-PG---AVGAP 684
Query: 126 APSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLS 185
P+GA G A A+ P + G G +GP G + + GA+ +
Sbjct: 685 GPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGER--- 741
Query: 186 LCPLKLRKGSSRRCQGLG--SSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGS 243
K KG + G + G +G PP +R G G+ R P
Sbjct: 742 --GAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGP-- 797
Query: 244 TLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARAS 303
P S ++G G G ++ P GR TGE + P P A
Sbjct: 798 --PGPSGISGPPGP----PGPAGKEGLRGPRGDQGPVGR-TGEVGAVGP---PGFAGEKG 847
Query: 304 ALPTARVAHASPPSLAAAQWRLGG----------GKRKPTVLKGAVRTDLSTAEEEDPRS 353
P+ A PP Q LG G+R + GAV + P
Sbjct: 848 --PSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAV-GEPGPLGIAGPPG 904
Query: 354 GRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLT 413
R A GS A G G PG P G +G G G
Sbjct: 905 ARGPPGAVGSPGVNGAPGEAGRDG----------NPGNDGPPGRDGQPGHKGERGYPGNI 954
Query: 414 QLVGSGRGSGVTHSVGTHALATRRGSRAPR-PVGVLRGVPHFRPLSSPAPQSPPRSPSVR 472
VG+ G VG RG P PVG PA PR PS
Sbjct: 955 GPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVG-------------PAGAVGPRGPS-- 999
Query: 473 AFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGG--GSQPFAGRRAER 530
GP+ G P LPG+ H+ G Q G G G Q G
Sbjct: 1000 --GPQGIRGDKGEPGEKGPRGLPGL------KGHN-GLQGLPGIAGHHGDQGAPGSVGPA 1050
Query: 531 GKRGAGVP 538
G RG P
Sbjct: 1051 GPRGPAGP 1058
Score = 45.8 bits (107), Expect = 1e-04
Identities = 119/479 (24%), Positives = 152/479 (31%), Gaps = 103/479 (21%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRS 110
P G+ D A GP P GS P + GE +GP+ + A +
Sbjct: 686 PAGATGDRGEAGAAGPAGPAGPRGS-----PGERGEVGPAGPNGFAGPAGAAGQPGAKGE 740
Query: 111 RRAAGPG-----------LDCAGSA-----PAPSGAQSCGGPA-----PASALRR-PLTQ 148
R A GP + AG A P P+G++ GGP P +A R P
Sbjct: 741 RGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGP 800
Query: 149 WDASGG------GGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGL 202
SG G+ GPR GR+ GA + KG S G
Sbjct: 801 SGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAG-----EKGPS----GE 851
Query: 203 GSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGST----LPPSSVLAGCVGTR 258
+ G GTP P L GA G +R PG P +AG G R
Sbjct: 852 AGTAGPPGTPGPQGLL-----GAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGAR 906
Query: 259 ----ARGHGGV-----QRQRFSAPSSHSTSG--GRPTGERSSREP-LLDPSKAARASAL- 305
A G GV + R P + G G+P + P + P AA A
Sbjct: 907 GPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAPGPH 966
Query: 306 ----PTARVAHASPPSLAAAQWRLGG-GKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPA 360
P + + + G G R P+ +G +R D E+ PR L+
Sbjct: 967 GPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQG-IRGDKGEPGEKGPRGLPGLKGH 1025
Query: 361 QGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 420
G + H G GA PG P G PA G G G T
Sbjct: 1026 NGLQGLPGIAGHHGDQGA----------PGSVGPAGPRGPAGPSGPAGKDGRT------- 1068
Query: 421 GSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLG 479
G +VG P G+ H P P P PP P V G G
Sbjct: 1069 --GHPGTVG--------------PAGIRGPQGHQGPAGPPGPPGPPGPPGVSGGGYDFG 1111
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 50.4 bits (119), Expect = 4e-06
Identities = 83/335 (24%), Positives = 114/335 (34%), Gaps = 58/335 (17%)
Query: 109 RSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALR----------RPLTQWDASGGGGRG 158
R+ A PGL P P G+ P +ALR +PL + GG
Sbjct: 15 RTPAARAPGL----LTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 159 SHSGPRAG---------------TPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLG 203
S PRAG P GR RA + T R + R LG
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLG 130
Query: 204 SSW----------GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAG 253
G T P R+ +AGAR G PG+ P + +
Sbjct: 131 QKGLRISAEETVARGKATEAPKRSAL-----SAGARRDTSG----PTPGTPSPAMARRSR 181
Query: 254 CVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHA 313
GT G+ R SA T G R + +S +PS AAR +
Sbjct: 182 AAGTEV----GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP 237
Query: 314 SPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHG 373
+ SL+++ L R +G R ++ + P+ +AL P Q + A
Sbjct: 238 ASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPAL 296
Query: 374 GSSGARTLPTPS----RARPGKPAPRGSAP-PARL 403
G + L TPS +ARP P + P PA L
Sbjct: 297 GPLSSSPLATPSPSGTKARPVPPPDNAATPLPATL 331
Score = 35.4 bits (80), Expect = 0.14
Identities = 119/515 (23%), Positives = 171/515 (33%), Gaps = 99/515 (19%)
Query: 63 AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAG 122
AG + G RP+ S R P + +VS S T + A R R +AG GL
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA----RRRPSAGGGLQRPA 238
Query: 123 S-----------APAPSGAQSCGGP-APA----------SALRRPLT---QWDASGGGGR 157
S +PA SG + G P APA ALR P + DA+ G
Sbjct: 239 SRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP 298
Query: 158 GSHSGPRAGTPGGGRSSRA----GARRKTPLSL-------CPLKLRKGSSRRCQGLGSSW 206
S S +P G ++ A P +L PL L S L +
Sbjct: 299 LSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLP 358
Query: 207 GGSGTPP---PPRALWNRHGGAAGARA--QVRGSEKRACPGSTLPPSSV-LAGCVGTRAR 260
TPP PP + ++ P PPS + L+ T +
Sbjct: 359 SPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL 418
Query: 261 GHGGVQ----------RQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARV 310
G +Q RQ ++ +S S P + PL P+ ++L A
Sbjct: 419 GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVS 478
Query: 311 AHASPPSLAAAQWRLGGGKRKPTV-LKGAVRTDLSTAEE------EDPRSGRALEPAQGS 363
+SP ++ Q P L + L T + P + P +
Sbjct: 479 PLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENL 538
Query: 364 ELWARAERHGGSSGARTLPTPSRARPGKPAPRG-SAPPARLRGGGGGSGLTQLVGSGRGS 422
A S+ L TP P PAP APP+ L
Sbjct: 539 PSLAPPPLQTASA---PLTTPHLETPPCPAPCPLQAPPSPL------------------- 576
Query: 423 GVTHSVGTHALATRRGSRAPRPVGV--LRGVPH--FRPLSSPAPQSPP-------RSPSV 471
T T + +AP + L+G+P PL++P PQ+PP ++P
Sbjct: 577 -TTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPS 635
Query: 472 RAFGPRLGAGRLSCPQAPRAAALPGI-AVLAPSPA 505
P L PQAP A A+ + A +P P+
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS 670
Score = 32.7 bits (73), Expect = 0.91
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Query: 436 RRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
+ G+ A P G+ RP SP P P ++R G GR P A RA +
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRK--PLAERAGGIG 66
Query: 496 GIAVLAPSPAHDWGGQRCEGCGG---GSQPFAGRRAER 530
G + P A G R G S+P A R ER
Sbjct: 67 GATI--PESAPRAGPTRSAGTSSRNPASRPPASGRGER 102
Score = 32.0 bits (71), Expect = 1.5
Identities = 92/362 (25%), Positives = 123/362 (33%), Gaps = 58/362 (16%)
Query: 48 DRVPRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107
+ V RG T++ P R + S RR P+ RR+ A T +
Sbjct: 140 ETVARGKATEA----------PKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL 189
Query: 108 RRSRRAAGPGLDCAGSAPAPSGA--QSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA 165
R +A P G + S A S P+PA A RRP S GGG
Sbjct: 190 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA-ARRRP------SAGGGLQR------ 236
Query: 166 GTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPR--ALWNRHG 223
+SR+ + TPLS R G S R GTP P + G
Sbjct: 237 ------PASRSLSSSATPLS---SPARSGPSAR-----------GTPRAPAHPSQPKPKG 276
Query: 224 GAAGARAQVRGSEKRACPGSTLPPSSVLA--GCVGTRARGHGGVQRQRFSAPSSHSTSGG 281
A QV K A P SS LA GT+AR P++
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLP---- 332
Query: 282 RPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKP---TVLKGA 338
P+ ++ PL PS +A S L T A+PPS A + P T+
Sbjct: 333 -PSPPLATPLPLAPPSPSAPPS-LQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQ 390
Query: 339 VRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSA 398
V L++ + P S AL Q + S P ++A P+ S
Sbjct: 391 VPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPAST 450
Query: 399 PP 400
PP
Sbjct: 451 PP 452
Score = 32.0 bits (71), Expect = 1.5
Identities = 66/262 (25%), Positives = 80/262 (30%), Gaps = 46/262 (17%)
Query: 111 RRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGG 170
RR PG D + S P + A + G P P S R P + G HS TP
Sbjct: 856 RRPPTPGPDTSVSGPRLTLALAPGPPPPPS--RSPSS---TLSGPDLAGHSSSATSTPEE 910
Query: 171 GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARA 230
R +G GG+ PPP A AA +R
Sbjct: 911 LRGYDSGPE---------------------------GGAAASPPPDAELAACHPAAWSRG 943
Query: 231 QVRGSEKRACPGSTLP------PSSVLAGCVGTRARGHGGVQRQ--RFSAPSSHSTSGGR 282
R PG+ LP P S C G S TSGG+
Sbjct: 944 PAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGK 1003
Query: 283 PT----GERSSREPLLDPSKAARASALPTARVAHASPPS--LAAAQWRLGGGKRKPTVLK 336
SSR P AL + V H + LAAA+ GG P +
Sbjct: 1004 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 1063
Query: 337 GAVRTDLSTAEEEDPRSGRALE 358
G T + A D GR E
Sbjct: 1064 GGGVTGGARAALSDAELGRWAE 1085
Score = 31.6 bits (70), Expect = 2.0
Identities = 47/174 (27%), Positives = 58/174 (33%), Gaps = 37/174 (21%)
Query: 389 PGKPAPRGSAPPARLRGGG--------------GGSGLTQLVGSGRGSGVTHSVGTHAL- 433
PG P P PA LR G GG G + S +G T S GT +
Sbjct: 30 PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN 89
Query: 434 ------ATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQ 487
A+ RG RAP G P+SSP S P GP G+
Sbjct: 90 PASRPPASGRGERAPPAKNTSPG-----PVSSPGRASGTTRP-----GP---LGQKGLRI 136
Query: 488 APRAAALPGIAVLAPSPAHDWGGQRCEGCG---GGSQPFAGRRAERGKRGAGVP 538
+ G A AP + G R + G G P RR+ G+P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLP 190
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 50.1 bits (118), Expect = 5e-06
Identities = 106/403 (26%), Positives = 136/403 (33%), Gaps = 80/403 (19%)
Query: 112 RAAGPGLDCAGSAPAPSGAQSCGGPAPAS-----------ALRRPLT---QWDASGGGGR 157
R PG C AP P G + GPA S A +RP T +W+ +
Sbjct: 12 RTPAPG--CPEVAPQPEGTDA-PGPAVCSPTARAPPPILPAPQRPPTRAREWEGAAWA-- 66
Query: 158 GSHSGPRAGTPGGGRSSRA--GARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPP 215
AG G G + A G+RR L PL R+ S G + G G P P
Sbjct: 67 -------AGATGVGAALLALPGSRR---LGRVPLTFREASPGPAPGAPRARGSCGREPGP 116
Query: 216 RALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSS 275
R R +AG R + RA P + L VG+ R G S P
Sbjct: 117 RR--RRAPSSAGKRP---AAAARAAPPRQRSLARCLPRSVGSCVRPSVGP-----SLPRR 166
Query: 276 HSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVL 335
H R R PL P R+ ASPP LAA P
Sbjct: 167 HCRRHCRC---HCRRRPLPKPPPLQ-------PRLGSASPPRLAAPLAGSRAPSLSPFPR 216
Query: 336 KGAVRTDLSTAEEEDP------RSGRALEPAQ---GSELWARAERHGGSSGARTLPTPSR 386
+ R + S A P R G + + G E R R G + G+ +P
Sbjct: 217 RCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIPA-GP 275
Query: 387 ARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVG 446
A PG+ R +A R RGGG G + +G GV V A + R P P
Sbjct: 276 AAPGRAGERRAARQWRKRGGGPGVSPRE---GAQGEGVRGGVTPRARGSSTCLR-PSPAT 331
Query: 447 VLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAP 489
G P+ ++ A GPRL A + P
Sbjct: 332 WQGGAPY---------------RAIFAAGPRLSAPSAEAEEVP 359
Score = 48.1 bits (113), Expect = 2e-05
Identities = 92/357 (25%), Positives = 118/357 (33%), Gaps = 63/357 (17%)
Query: 67 CGPTRPSGSLTTRRPRDAGE----AAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAG 122
CG R G R P AG+ AA + P RQR +R G R + GP L
Sbjct: 110 CG--REPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRPSVGPSLP--- 164
Query: 123 SAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKT 182
+ C RRPL + GS S PR P G R
Sbjct: 165 -------RRHCRRHCRCHCRRRPLPK-PPPLQPRLGSASPPRLAAPLAG-------SRAP 209
Query: 183 PLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRALWNRHGGAAGARAQVRGSEKR---- 238
LS P + R+ + R G G P PR+L +R G GAR + G E+R
Sbjct: 210 SLSPFPRRCRRRAERSPAGHGL--------PLPRSL-SRGGEVVGARRRRGGEERRVRGR 260
Query: 239 ----ACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREP-- 292
A +P G G R R+R P G + G R P
Sbjct: 261 RQGCALGSPPIPAGPAAPGRAGERRAAR--QWRKRGGGPGVSPREGAQGEGVRGGVTPRA 318
Query: 293 -----LLDPSKAARASALPTARVAHASP----PSLAAAQWRLGGGKRKPTVLKGAVRTDL 343
L PS A P + A P PS A + G PT L
Sbjct: 319 RGSSTCLRPSPATWQGGAPYRAIFAAGPRLSAPSAEAEEVPGGHTASNPTY------EPL 372
Query: 344 STAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPP 400
S+ + P GR P+ + +R G + P+ S P+P S PP
Sbjct: 373 SSRRTKAPSEGRD-SPSSPATSTHYLDRESGLGSVNSHPSRSPYNWSPPSP--SVPP 426
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 50.1 bits (118), Expect = 5e-06
Identities = 82/278 (29%), Positives = 99/278 (35%), Gaps = 38/278 (13%)
Query: 286 ERSSREPLLDPSKAAR----ASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRT 341
ERSSR L +KA AS P R A P + G R +R
Sbjct: 61 ERSSRH--LPQAKAINPHHTASLSPAGRGAQRPPERFLPSSVSAGSAAR-------TLRR 111
Query: 342 DLSTAEEEDPR-SGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAP- 399
+ + PR +G A G E W + G T P PS R P PR P
Sbjct: 112 GSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPA 171
Query: 400 PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLS- 458
PA +G GGG L G G + A G A G+ RPL
Sbjct: 172 PAGGKGEGGGKESAVLWKGAEGGG--EKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLEL 229
Query: 459 --SPAPQSPPRSPSVRAF----GPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQR 512
PA S P SP +R F R+GA L+ QA AA G+ P+P
Sbjct: 230 VPRPALPSAP-SPRIRCFLAPGRSRVGAA-LTEEQAAGEAAARGLWRRKPAPCPRGA--- 284
Query: 513 CEGCGGGSQPFAGRRAE---RGKRG------AGVPWRT 541
C GG RRAE G RG +G WR+
Sbjct: 285 CAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRS 322
Score = 41.2 bits (95), Expect = 0.003
Identities = 93/372 (25%), Positives = 125/372 (33%), Gaps = 77/372 (20%)
Query: 20 LPSLGEKAL----TALSHQNP---EFPQIARNDCWDR-VPRGSVTDSNHT----PAGLDC 67
+PSLG T LS P FP ++ R +P+ + +HT PAG
Sbjct: 29 IPSLGRNLHVSPGTVLSDLQPLGITFPVFENSERSSRHLPQAKAINPHHTASLSPAGR-- 86
Query: 68 GPTRP------------SGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAG 115
G RP S + T RR +A +A P+ + S W + G
Sbjct: 87 GAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRG 146
Query: 116 PGLDCAGSA--------------PAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHS 161
GL A PAP+G + GG ++ L + A GGG +G+ +
Sbjct: 147 RGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWK-----GAEGGGEKGNRN 201
Query: 162 GPRA--GTPGG-GRSSRAGARRKTPLSLCP-----------LKLRKGSSRRCQGLGSSWG 207
A G P ++ G RR+ PL L P ++ R G +
Sbjct: 202 MAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEE 261
Query: 208 GSGTPPPPRALWNRH-----GGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGH 262
+ R LW R GA AR RG+ G +AG G
Sbjct: 262 QAAGEAAARGLWRRKPAPCPRGACAARLGGRGT------GRARRAEFRVAGPRGVAEEAE 315
Query: 263 GGVQRQRFSAPSSHSTSGG----RPTG-ERSSREPLLDPSKAARASALPTARVAHASPPS 317
G R S PS + SGG P G R P P A RA A P
Sbjct: 316 SG--RGWRSWPSFSAVSGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPG 373
Query: 318 LAAAQWRLGGGK 329
R GGG+
Sbjct: 374 DRRGDGRFGGGR 385
Score = 37.4 bits (85), Expect = 0.037
Identities = 81/328 (24%), Positives = 107/328 (32%), Gaps = 59/328 (17%)
Query: 156 GRGSHSGPRAGTPGG------GRSSRAGARRKTPLSLCPLKLRKGSS----RRCQGLGSS 205
GRG+ P P R+ R G+ + + P + +GS R QGLG
Sbjct: 85 GRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPP 144
Query: 206 WG-GSGTPPPPRAL----------------WNRHGGAAGARAQVRGSEKRACPGSTLPPS 248
G G T PPP +L GG + +G+E G+ +
Sbjct: 145 RGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRNMAA 204
Query: 249 SVLAGCVGTRARGHGGVQRQRF----------SAPSSHSTSGGRPTGERSSREPLLDPSK 298
+ L A+ G++R+R SAPS P G L +
Sbjct: 205 APLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAP-GRSRVGAALTEEQA 263
Query: 299 AARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALE 358
A A+A R A P A A RLGG +G R + PR E
Sbjct: 264 AGEAAARGLWRRKPAPCPRGACAA-RLGG--------RGTGRARRAEFRVAGPRG--VAE 312
Query: 359 PAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPA--------RLRGGGGGS 410
A+ W SG P P+ GK AP PP RLR G
Sbjct: 313 EAESGRGWRSWPSFSAVSGGGESPDPAGCSRGKAAP--EEPPRVARRAHENRLRTSARGL 370
Query: 411 GLTQLVGSGRGSGVTHSVGTHALATRRG 438
G G GR G + G + R G
Sbjct: 371 GPGDRRGDGRFGGGRGAEGAGSGLPRGG 398
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 50.1 bits (118), Expect = 5e-06
Identities = 82/278 (29%), Positives = 99/278 (35%), Gaps = 38/278 (13%)
Query: 286 ERSSREPLLDPSKAAR----ASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRT 341
ERSSR L +KA AS P R A P + G R +R
Sbjct: 61 ERSSRH--LPQAKAINPHHTASLSPAGRGAQRPPERFLPSSVSAGSAAR-------TLRR 111
Query: 342 DLSTAEEEDPR-SGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAP- 399
+ + PR +G A G E W + G T P PS R P PR P
Sbjct: 112 GSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPA 171
Query: 400 PARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLS- 458
PA +G GGG L G G + A G A G+ RPL
Sbjct: 172 PAGGKGEGGGKESAVLWKGAEGGG--EKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLEL 229
Query: 459 --SPAPQSPPRSPSVRAF----GPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQR 512
PA S P SP +R F R+GA L+ QA AA G+ P+P
Sbjct: 230 VPRPALPSAP-SPRIRCFLAPGRSRVGAA-LTEEQAAGEAAARGLWRRKPAPCPRGA--- 284
Query: 513 CEGCGGGSQPFAGRRAE---RGKRG------AGVPWRT 541
C GG RRAE G RG +G WR+
Sbjct: 285 CAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRS 322
Score = 41.2 bits (95), Expect = 0.003
Identities = 93/372 (25%), Positives = 125/372 (33%), Gaps = 77/372 (20%)
Query: 20 LPSLGEKAL----TALSHQNP---EFPQIARNDCWDR-VPRGSVTDSNHT----PAGLDC 67
+PSLG T LS P FP ++ R +P+ + +HT PAG
Sbjct: 29 IPSLGRNLHVSPGTVLSDLQPLGITFPVFENSERSSRHLPQAKAINPHHTASLSPAGR-- 86
Query: 68 GPTRP------------SGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAG 115
G RP S + T RR +A +A P+ + S W + G
Sbjct: 87 GAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRG 146
Query: 116 PGLDCAGSA--------------PAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHS 161
GL A PAP+G + GG ++ L + A GGG +G+ +
Sbjct: 147 RGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWK-----GAEGGGEKGNRN 201
Query: 162 GPRA--GTPGG-GRSSRAGARRKTPLSLCP-----------LKLRKGSSRRCQGLGSSWG 207
A G P ++ G RR+ PL L P ++ R G +
Sbjct: 202 MAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAPGRSRVGAALTEE 261
Query: 208 GSGTPPPPRALWNRH-----GGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGH 262
+ R LW R GA AR RG+ G +AG G
Sbjct: 262 QAAGEAAARGLWRRKPAPCPRGACAARLGGRGT------GRARRAEFRVAGPRGVAEEAE 315
Query: 263 GGVQRQRFSAPSSHSTSGG----RPTG-ERSSREPLLDPSKAARASALPTARVAHASPPS 317
G R S PS + SGG P G R P P A RA A P
Sbjct: 316 SG--RGWRSWPSFSAVSGGGESPDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPG 373
Query: 318 LAAAQWRLGGGK 329
R GGG+
Sbjct: 374 DRRGDGRFGGGR 385
Score = 37.4 bits (85), Expect = 0.037
Identities = 81/328 (24%), Positives = 107/328 (32%), Gaps = 59/328 (17%)
Query: 156 GRGSHSGPRAGTPGG------GRSSRAGARRKTPLSLCPLKLRKGSS----RRCQGLGSS 205
GRG+ P P R+ R G+ + + P + +GS R QGLG
Sbjct: 85 GRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPP 144
Query: 206 WG-GSGTPPPPRAL----------------WNRHGGAAGARAQVRGSEKRACPGSTLPPS 248
G G T PPP +L GG + +G+E G+ +
Sbjct: 145 RGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKGNRNMAA 204
Query: 249 SVLAGCVGTRARGHGGVQRQRF----------SAPSSHSTSGGRPTGERSSREPLLDPSK 298
+ L A+ G++R+R SAPS P G L +
Sbjct: 205 APLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSPRIRCFLAP-GRSRVGAALTEEQA 263
Query: 299 AARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRSGRALE 358
A A+A R A P A A RLGG +G R + PR E
Sbjct: 264 AGEAAARGLWRRKPAPCPRGACAA-RLGG--------RGTGRARRAEFRVAGPRG--VAE 312
Query: 359 PAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRGSAPPA--------RLRGGGGGS 410
A+ W SG P P+ GK AP PP RLR G
Sbjct: 313 EAESGRGWRSWPSFSAVSGGGESPDPAGCSRGKAAP--EEPPRVARRAHENRLRTSARGL 370
Query: 411 GLTQLVGSGRGSGVTHSVGTHALATRRG 438
G G GR G + G + R G
Sbjct: 371 GPGDRRGDGRFGGGRGAEGAGSGLPRGG 398
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 49.7 bits (117), Expect = 7e-06
Identities = 132/524 (25%), Positives = 166/524 (31%), Gaps = 76/524 (14%)
Query: 66 DCGPTRPSGSLTTRRPRDAGEAAVSG-PSRQRRTSRARTALWGRRSRRAAGPGLDCAGSA 124
+ GPT G + PR GE G P + T A PG+ A
Sbjct: 376 EAGPTGARGPEGAQGPR--GEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 433
Query: 125 PAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA--------GTPG-GGRSSR 175
P P G GP A+ P Q G G GP+ G PG G +
Sbjct: 434 PGPRGPP---GPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGK 490
Query: 176 AGARRKTPLSLCP--------------------LKLRKGS--SRRCQGLGSSWGGSGTP- 212
GAR + P + P L KG+ R GL G +G P
Sbjct: 491 RGARGE-PGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPG 549
Query: 213 -------PPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGV 265
P R L R G A G + +V S G PP ARG GV
Sbjct: 550 RPGEPGLPGARGLTGRPGDA-GPQGKVGPSGAPGEDGRPGPPGP-------QGARGQPGV 601
Query: 266 QRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRL 325
F P + G+ GE+ L + R A PP A
Sbjct: 602 MG--FPGPKGANGEPGK-AGEKG-----LPGAPGLRGLPGKDGETGAAGPPGPAGPAGER 653
Query: 326 GG-GKRKPTVLKGAVRTDLSTAEEEDPRS-GRALEPAQGSELWARAER----HGGSSGAR 379
G G P+ +G E P G E + R ER GS GA+
Sbjct: 654 GEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQ 713
Query: 380 TLPTPSRARPGKPA---PRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATR 436
L P R PG P P+G++ PA G G GL + G +G+ G
Sbjct: 714 GLQGP-RGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGE 772
Query: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQ-SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
+G RG+ P+ P P + V GP AG P P
Sbjct: 773 KGPEGAPGKDGGRGLT--GPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPP 830
Query: 496 GIAVLAPSPAHD-WGGQRCEGCGGGSQPFAGRRAERGKRGAGVP 538
G A A P D G + E G + AG +G GA P
Sbjct: 831 GPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 874
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/132 (33%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPR----DAGEAAVSGPSRQRRTSRARTALW 106
P G D A GP+ P+G+ + P+ D GEA G R + R T L
Sbjct: 1081 PTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG-ERGLKGHRGFTGLQ 1139
Query: 107 GRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG 166
G GP P PSG Q GPA S R P SG G GP G
Sbjct: 1140 G-----LPGP--------PGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP-IG 1185
Query: 167 TPG-GGRSSRAG 177
PG GRS G
Sbjct: 1186 PPGPRGRSGETG 1197
Score = 41.2 bits (95), Expect = 0.003
Identities = 130/527 (24%), Positives = 165/527 (31%), Gaps = 82/527 (15%)
Query: 51 PRGSV-TDSNHTPAGLDCGPTRPSGSL----TTRRPRDAGEAAVSGPSRQRRTSRARTAL 105
PRG T P G GP P G+ P + G A ++GP R
Sbjct: 718 PRGLPGTPGTDGPKGAS-GPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDV------ 770
Query: 106 WGRRSRRAA-----GPGLDCAGSAPAPSGAQS------CGGPAPASALRRPLTQWDASGG 154
G + A G GL P P+GA GPA ++ R + +G
Sbjct: 771 -GEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGP 829
Query: 155 GGRGSHSGPRA--GTPGG-------GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSS 205
G +GP G PG G+ AGA S P + G+
Sbjct: 830 PGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAP------GPQGPTGVTGP 883
Query: 206 WGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTR-ARGHGG 264
G G PP A G GA +V PG PP +G G + ARG G
Sbjct: 884 KGARGAQGPPGAT-----GFPGAAGRVGPPGSNGNPGPPGPPGP--SGKDGPKGARGDSG 936
Query: 265 VQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWR 324
R P +G P GE+ EP D A P L +
Sbjct: 937 PPG-RAGEPGLQGPAG--PPGEKG--EPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGE 991
Query: 325 LG-GGKRKPTVLKGAVRTDLSTAEEEDPR-------SGRALEPAQGSELWARAERHGGSS 376
G G P+ G ++ + P +G A EP G E A+ G
Sbjct: 992 RGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP--GREGSPGADGPPGRD 1049
Query: 377 GARTLP-----TPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTH 431
GA + T + PG P P GS PA G G G G SG + G
Sbjct: 1050 GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQ 1109
Query: 432 ALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRA 491
RG + RG+ R + P PS G + GA + P PR
Sbjct: 1110 GPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPS----GDQ-GASGPAGPSGPRG 1164
Query: 492 AALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVP 538
P P G G G P G R G+ G P
Sbjct: 1165 ---------PPGPVGPSGKDGANGIPGPIGP-PGPRGRSGETGPAGP 1201
Score = 39.3 bits (90), Expect = 0.010
Identities = 132/537 (24%), Positives = 161/537 (29%), Gaps = 95/537 (17%)
Query: 36 PEFPQIARNDCWDRVPRGSVTDSNHT----PAGLDCGPTRPSGSLTTRRPRDAGEAAVSG 91
P+ P + ++ PRG D P G D P P P G G
Sbjct: 118 PKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGN------PGPPGPPGPPG 171
Query: 92 PSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDA 151
P A+ A G +A G L P G + GPA A +
Sbjct: 172 PPGLGGNFAAQMA--GGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGE 229
Query: 152 SGGGGRGSHSGPRA--GTPGG-GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGG 208
G G GPR G PG G AG K K R G + G
Sbjct: 230 PGEPGVSGPMGPRGPPGPPGKPGDDGEAG------------KPGKAGERGPPGPQGARGF 277
Query: 209 SGTPPPPRALWNR-HGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQR 267
GTP P +R + G GA+ + + GS P + G +G R
Sbjct: 278 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGS--PGENGSPGPMGPRG-------- 327
Query: 268 QRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGG 327
P +G P G +R P A P V A P A
Sbjct: 328 ----LPGERGRTG--PAGAAGARGNDGQPGPAG-----PPGPVGPAGGPGFPGAPG--AK 374
Query: 328 GKRKPTVLKGAVRTDLSTAEEEDPRS----GRALEPAQGSELWARAERHGGSSGARTLPT 383
G+ PT +G E P S G + P A+ GS+GA +
Sbjct: 375 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK-----GSAGAPGIA- 428
Query: 384 PSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAP- 442
PG P PRG P G G G T G G G A +G+ P
Sbjct: 429 ---GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPA 485
Query: 443 ----------RPVGV-------------LRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLG 479
P GV RG P L+ P R PS A GP+
Sbjct: 486 GEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLA-GPK-- 542
Query: 480 AGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGG--GSQPFAGRRAERGKRG 534
G P P LPG L P D G Q G G G G +G RG
Sbjct: 543 -GANGDPGRPGEPGLPGARGLTGRPG-DAGPQGKVGPSGAPGEDGRPGPPGPQGARG 597
Score = 39.3 bits (90), Expect = 0.010
Identities = 53/193 (27%), Positives = 66/193 (34%), Gaps = 23/193 (11%)
Query: 357 LEPAQGSELWARAERHGGSSGARTLPTPSRARP-----GKPAPRGSAPPARLRGGGGGSG 411
L+ A+G + GS G P P R G+ P G+A G G +G
Sbjct: 295 LDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 354
Query: 412 LTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSV 471
VG G G + G A G+R P RG P SP P +P
Sbjct: 355 PPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEP--GTPGSPGPAGASGNPGT 412
Query: 472 RAF-GPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGG-----GSQPFAG 525
G + AG AP A PG P P G Q G G G AG
Sbjct: 413 DGIPGAKGSAG------APGIAGAPGF----PGPRGPPGPQGATGPLGPKGQTGEPGIAG 462
Query: 526 RRAERGKRGAGVP 538
+ E+G +G P
Sbjct: 463 FKGEQGPKGEPGP 475
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 49.7 bits (117), Expect = 7e-06
Identities = 132/524 (25%), Positives = 166/524 (31%), Gaps = 76/524 (14%)
Query: 66 DCGPTRPSGSLTTRRPRDAGEAAVSG-PSRQRRTSRARTALWGRRSRRAAGPGLDCAGSA 124
+ GPT G + PR GE G P + T A PG+ A
Sbjct: 307 EAGPTGARGPEGAQGPR--GEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 364
Query: 125 PAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRA--------GTPG-GGRSSR 175
P P G GP A+ P Q G G GP+ G PG G +
Sbjct: 365 PGPRGPP---GPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGK 421
Query: 176 AGARRKTPLSLCP--------------------LKLRKGS--SRRCQGLGSSWGGSGTP- 212
GAR + P + P L KG+ R GL G +G P
Sbjct: 422 RGARGE-PGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPG 480
Query: 213 -------PPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGV 265
P R L R G A G + +V S G PP ARG GV
Sbjct: 481 RPGEPGLPGARGLTGRPGDA-GPQGKVGPSGAPGEDGRPGPPGP-------QGARGQPGV 532
Query: 266 QRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRL 325
F P + G+ GE+ L + R A PP A
Sbjct: 533 MG--FPGPKGANGEPGK-AGEKG-----LPGAPGLRGLPGKDGETGAAGPPGPAGPAGER 584
Query: 326 GG-GKRKPTVLKGAVRTDLSTAEEEDPRS-GRALEPAQGSELWARAER----HGGSSGAR 379
G G P+ +G E P G E + R ER GS GA+
Sbjct: 585 GEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQ 644
Query: 380 TLPTPSRARPGKPA---PRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATR 436
L P R PG P P+G++ PA G G GL + G +G+ G
Sbjct: 645 GLQGP-RGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGE 703
Query: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQ-SPPRSPSVRAFGPRLGAGRLSCPQAPRAAALP 495
+G RG+ P+ P P + V GP AG P P
Sbjct: 704 KGPEGAPGKDGGRGLT--GPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPP 761
Query: 496 GIAVLAPSPAHD-WGGQRCEGCGGGSQPFAGRRAERGKRGAGVP 538
G A A P D G + E G + AG +G GA P
Sbjct: 762 GPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGP 805
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/132 (33%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 51 PRGSVTDSNHTPAGLDCGPTRPSGSLTTRRPR----DAGEAAVSGPSRQRRTSRARTALW 106
P G D A GP+ P+G+ + P+ D GEA G R + R T L
Sbjct: 1012 PTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPG-ERGLKGHRGFTGLQ 1070
Query: 107 GRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAG 166
G GP P PSG Q GPA S R P SG G GP G
Sbjct: 1071 G-----LPGP--------PGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGP-IG 1116
Query: 167 TPG-GGRSSRAG 177
PG GRS G
Sbjct: 1117 PPGPRGRSGETG 1128
Score = 41.2 bits (95), Expect = 0.003
Identities = 130/527 (24%), Positives = 165/527 (31%), Gaps = 82/527 (15%)
Query: 51 PRGSV-TDSNHTPAGLDCGPTRPSGSL----TTRRPRDAGEAAVSGPSRQRRTSRARTAL 105
PRG T P G GP P G+ P + G A ++GP R
Sbjct: 649 PRGLPGTPGTDGPKGAS-GPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDV------ 701
Query: 106 WGRRSRRAA-----GPGLDCAGSAPAPSGAQS------CGGPAPASALRRPLTQWDASGG 154
G + A G GL P P+GA GPA ++ R + +G
Sbjct: 702 -GEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGP 760
Query: 155 GGRGSHSGPRA--GTPGG-------GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSS 205
G +GP G PG G+ AGA S P + G+
Sbjct: 761 PGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAP------GPQGPTGVTGP 814
Query: 206 WGGSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTR-ARGHGG 264
G G PP A G GA +V PG PP +G G + ARG G
Sbjct: 815 KGARGAQGPPGAT-----GFPGAAGRVGPPGSNGNPGPPGPPGP--SGKDGPKGARGDSG 867
Query: 265 VQRQRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWR 324
R P +G P GE+ EP D A P L +
Sbjct: 868 PPG-RAGEPGLQGPAG--PPGEKG--EPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGE 922
Query: 325 LG-GGKRKPTVLKGAVRTDLSTAEEEDPR-------SGRALEPAQGSELWARAERHGGSS 376
G G P+ G ++ + P +G A EP G E A+ G
Sbjct: 923 RGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP--GREGSPGADGPPGRD 980
Query: 377 GARTLP-----TPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTH 431
GA + T + PG P P GS PA G G G G SG + G
Sbjct: 981 GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQ 1040
Query: 432 ALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRA 491
RG + RG+ R + P PS G + GA + P PR
Sbjct: 1041 GPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGPS----GDQ-GASGPAGPSGPRG 1095
Query: 492 AALPGIAVLAPSPAHDWGGQRCEGCGGGSQPFAGRRAERGKRGAGVP 538
P P G G G P G R G+ G P
Sbjct: 1096 ---------PPGPVGPSGKDGANGIPGPIGP-PGPRGRSGETGPAGP 1132
Score = 39.3 bits (90), Expect = 0.010
Identities = 132/537 (24%), Positives = 161/537 (29%), Gaps = 95/537 (17%)
Query: 36 PEFPQIARNDCWDRVPRGSVTDSNHT----PAGLDCGPTRPSGSLTTRRPRDAGEAAVSG 91
P+ P + ++ PRG D P G D P P P G G
Sbjct: 49 PKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGN------PGPPGPPGPPG 102
Query: 92 PSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDA 151
P A+ A G +A G L P G + GPA A +
Sbjct: 103 PPGLGGNFAAQMA--GGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGE 160
Query: 152 SGGGGRGSHSGPRA--GTPGG-GRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGG 208
G G GPR G PG G AG K K R G + G
Sbjct: 161 PGEPGVSGPMGPRGPPGPPGKPGDDGEAG------------KPGKAGERGPPGPQGARGF 208
Query: 209 SGTPPPPRALWNR-HGGAAGARAQVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQR 267
GTP P +R + G GA+ + + GS P + G +G R
Sbjct: 209 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGS--PGENGSPGPMGPRG-------- 258
Query: 268 QRFSAPSSHSTSGGRPTGERSSREPLLDPSKAARASALPTARVAHASPPSLAAAQWRLGG 327
P +G P G +R P A P V A P A
Sbjct: 259 ----LPGERGRTG--PAGAAGARGNDGQPGPAG-----PPGPVGPAGGPGFPGAPG--AK 305
Query: 328 GKRKPTVLKGAVRTDLSTAEEEDPRS----GRALEPAQGSELWARAERHGGSSGARTLPT 383
G+ PT +G E P S G + P A+ GS+GA +
Sbjct: 306 GEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK-----GSAGAPGIA- 359
Query: 384 PSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATRRGSRAP- 442
PG P PRG P G G G T G G G A +G+ P
Sbjct: 360 ---GAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPA 416
Query: 443 ----------RPVGV-------------LRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLG 479
P GV RG P L+ P R PS A GP+
Sbjct: 417 GEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLA-GPK-- 473
Query: 480 AGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGG--GSQPFAGRRAERGKRG 534
G P P LPG L P D G Q G G G G +G RG
Sbjct: 474 -GANGDPGRPGEPGLPGARGLTGRPG-DAGPQGKVGPSGAPGEDGRPGPPGPQGARG 528
Score = 39.3 bits (90), Expect = 0.010
Identities = 53/193 (27%), Positives = 66/193 (34%), Gaps = 23/193 (11%)
Query: 357 LEPAQGSELWARAERHGGSSGARTLPTPSRARP-----GKPAPRGSAPPARLRGGGGGSG 411
L+ A+G + GS G P P R G+ P G+A G G +G
Sbjct: 226 LDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAG 285
Query: 412 LTQLVGSGRGSGVTHSVGTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSV 471
VG G G + G A G+R P RG P SP P +P
Sbjct: 286 PPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEP--GTPGSPGPAGASGNPGT 343
Query: 472 RAF-GPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGG-----GSQPFAG 525
G + AG AP A PG P P G Q G G G AG
Sbjct: 344 DGIPGAKGSAG------APGIAGAPGF----PGPRGPPGPQGATGPLGPKGQTGEPGIAG 393
Query: 526 RRAERGKRGAGVP 538
+ E+G +G P
Sbjct: 394 FKGEQGPKGEPGP 406
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,986,053
Number of Sequences: 37866
Number of extensions: 2027157
Number of successful extensions: 16160
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 1272
Number of HSP's that attempted gapping in prelim test: 11024
Number of HSP's gapped (non-prelim): 4941
length of query: 564
length of database: 18,247,518
effective HSP length: 108
effective length of query: 456
effective length of database: 14,157,990
effective search space: 6456043440
effective search space used: 6456043440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.