| Name: TTMA | Sequence: fasta or formatted (621aa) | NCBI GI: 122692281 | |
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Description: hypothetical protein LOC645369
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 14.0 87 12 C cysteine 1.3 8 1 D aspartate 3.4 21 2 E glutamate 4.7 29 3 F phenylalanine 1.9 12 3 G glycine 10.1 63 2 H histidine 1.1 7 1 I isoleucine 3.4 21 2 K lysine 4.0 25 2 L leucine 7.2 45 2 M methionine 1.1 7 1 N asparagine 1.9 12 1 P proline 10.5 65 3 Q glutamine 2.7 17 1 R arginine 8.5 53 3 S serine 14.0 87 5 T threonine 3.5 22 2 V valine 4.3 27 4 W tryptophan 0.6 4 1 Y tyrosine 1.4 9 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC645369 TMEM200A 0.078 transmembrane protein 200A TMEM200B 0.041 transmembrane protein 200B MARCKS 0.039 myristoylated alanine-rich protein kinase C substra... FLJ22184 0.029 PREDICTED: hypothetical protein LOC80164 LOC100133756 0.028 PREDICTED: hypothetical protein, partial FLJ22184 0.027 PREDICTED: hypothetical protein FLJ22184 TAF4 0.027 TBP-associated factor 4 GATA4 0.026 GATA binding protein 4 SRRM2 0.026 splicing coactivator subunit SRm300 ARID1A 0.025 AT rich interactive domain 1A isoform a ARID1A 0.025 AT rich interactive domain 1A isoform b OTUD7A 0.025 OTU domain containing 7A SRRM1 0.025 serine/arginine repetitive matrix 1 COL1A1 0.024 alpha 1 type I collagen preproprotein FLJ22184 0.024 PREDICTED: hypothetical protein FLJ22184 COL5A1 0.023 alpha 1 type V collagen preproprotein TNKS1BP1 0.023 tankyrase 1-binding protein 1 JUND 0.023 jun D proto-oncogene NACA 0.023 nascent polypeptide-associated complex alpha subuni... COL2A1 0.022 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.022 collagen, type II, alpha 1 isoform 2 precursor [Hom... FLJ37078 0.022 hypothetical protein LOC222183 FLJ31945 0.022 PREDICTED: hypothetical protein FLJ31945 0.022 PREDICTED: hypothetical protein ZNF831 0.022 zinc finger protein 831 COL1A2 0.021 alpha 2 type I collagen GNAS 0.021 GNAS complex locus XLas AGAP2 0.021 centaurin, gamma 1 isoform PIKE-L TRIO 0.021 triple functional domain (PTPRF interacting)Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
