Guide to the Human Genome
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Search of human proteins with 169180158

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169180158 PREDICTED: hypothetical protein [Homo sapiens]
         (295 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169180158 PREDICTED: hypothetical protein [Homo sapiens]           642   0.0  
gi|169179759 PREDICTED: hypothetical protein [Homo sapiens]           640   0.0  
gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]           581   e-166
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    47   2e-05
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          46   3e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       45   8e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       45   8e-05
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     44   1e-04
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       42   5e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    41   0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    41   0.001
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    41   0.001
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]       41   0.001
gi|150170670 piccolo isoform 2 [Homo sapiens]                          40   0.002
gi|150378539 piccolo isoform 1 [Homo sapiens]                          40   0.002
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    40   0.002
gi|238550198 synaptotagmin III [Homo sapiens]                          40   0.003
gi|238550196 synaptotagmin III [Homo sapiens]                          40   0.003
gi|14150054 synaptotagmin III [Homo sapiens]                           40   0.003
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          39   0.004
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    39   0.004
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]       39   0.005
gi|239742249 PREDICTED: hypothetical protein XP_002342465 [Homo ...    39   0.007
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]       39   0.007
gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo sap...    39   0.007
gi|122939151 Rho GTPase activating protein 9 isoform 2 [Homo sap...    39   0.007
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      38   0.009
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor...    38   0.012
gi|33286436 gametogenetin [Homo sapiens]                               38   0.012
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            37   0.016

>gi|169180158 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score =  642 bits (1655), Expect = 0.0
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS 60
           MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS
Sbjct: 1   MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS 60

Query: 61  VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ 120
           VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ
Sbjct: 61  VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ 120

Query: 121 IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL 180
           IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL
Sbjct: 121 IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL 180

Query: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA 240
           QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA
Sbjct: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA 240

Query: 241 VGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295
           VGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG
Sbjct: 241 VGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295


>gi|169179759 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score =  640 bits (1652), Expect = 0.0
 Identities = 294/295 (99%), Positives = 295/295 (100%)

Query: 1   MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS 60
           MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS
Sbjct: 1   MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS 60

Query: 61  VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ 120
           VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ
Sbjct: 61  VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ 120

Query: 121 IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL 180
           IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL
Sbjct: 121 IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGL 180

Query: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA 240
           QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA
Sbjct: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA 240

Query: 241 VGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295
           VGGP+AAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG
Sbjct: 241 VGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295


>gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score =  581 bits (1497), Expect = e-166
 Identities = 277/307 (90%), Positives = 278/307 (90%), Gaps = 24/307 (7%)

Query: 1   MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGR------------RVPDAGS 48
           MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGR            RVPDAGS
Sbjct: 1   MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRVPDAGS 60

Query: 49  ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQ 108
           ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQ  W AG PMRGQ
Sbjct: 61  ECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQCVWRAGPPMRGQ 120

Query: 109 SVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ 168
                       IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ
Sbjct: 121 ------------IVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ 168

Query: 169 PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228
           PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC
Sbjct: 169 PHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRAC 228

Query: 229 APQPQHQVDCSAVGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD 288
           APQPQHQVDCS VGGP+AAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD
Sbjct: 229 APQPQHQVDCSTVGGPMAAGEKPPVSRLGSAHQGLPTSAFEGACHALGDPGIFTGLEAGD 288

Query: 289 RTVSVPG 295
           RTVSVPG
Sbjct: 289 RTVSVPG 295


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 59/210 (28%), Positives = 73/210 (34%), Gaps = 25/210 (11%)

Query: 66  GPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSA 125
           GPP R   G   G P +G +    GPP R   G   G P +G +     PP  G+     
Sbjct: 112 GPPPRP--GKPEGPPPQGGNQ-SQGPPPRP--GKPEGPPPQGGNQSQGPPPRPGK---PE 163

Query: 126 GPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQP------HRATSPAAPG 179
           GPP   G     P  H  +  GP  Q GN    P      P+ P           P  PG
Sbjct: 164 GPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 223

Query: 180 LQECPRTGPSQPSMQLPSYP--EEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVD 237
             E P +         P +P   +G     G+K  RP PPG+ +        PQ      
Sbjct: 224 KPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPP 283

Query: 238 CSAVGGPVAAGEKPPVSRLGSAH---QGLP 264
                GP      PP  + G  H   QG P
Sbjct: 284 AGKPQGP------PPPPQGGRPHRPPQGQP 307


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 56/223 (25%), Positives = 76/223 (34%), Gaps = 36/223 (16%)

Query: 1   MGSAAQGPRCGVRVCGAQGP-RCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAP--D 57
           MG   +  R   R   +Q P + G S WG R     + G   + P    +  G +     
Sbjct: 179 MGKKVEVKRAEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVP 238

Query: 58  AGSVCGGAGPPMRGQWGWGAGSPMRGQSVW---GAGPPMRGQWGWGAGSPMRGQSVWGAG 114
           AG   GG GPP  G+       P     V    G  PP +G +  G G+P +    +G  
Sbjct: 239 AGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQG-FPQGYGAPPQFSFGYGPP 297

Query: 115 PPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATS 174
           PP   Q      PP V                          P P++    P       S
Sbjct: 298 PPPPDQF----APPGVP-------------------------PPPATPGAAPLAFPPPPS 328

Query: 175 PAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPP 217
            AAP + + P   P  P  Q   Y ++ SG  +G  D    PP
Sbjct: 329 QAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSDPSQQPP 371


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 56/231 (24%), Positives = 83/231 (35%), Gaps = 26/231 (11%)

Query: 30  RAPDVGSVGVGRRVPD--AGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVW 87
           + P  G++ +GR+     AG        P  G    G GP  +G        P   Q + 
Sbjct: 435 QTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLS 494

Query: 88  GAGPPMRGQWGWGAGSPMRG--QSVWGAGPPMRGQIVWS---AGPPRVQGTLVHCPTRHL 142
           G GPP          SP     Q    A PP +GQ   S   AG P         P    
Sbjct: 495 GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP------PAARP 548

Query: 143 SQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPR------TGPSQPSMQLP 196
                P RQ G       + ++ P  P  + +P     ++ P        GP++ + Q  
Sbjct: 549 PASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG 608

Query: 197 SYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVD---CSAVGGP 244
             P  G   ++  + + PGP G+ + Q+    A +P   V     +A GGP
Sbjct: 609 PVPRTGPPTTQQPRPSGPGPAGRPKPQL----AQKPSQDVPPPATAAAGGP 655



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 55/199 (27%), Positives = 75/199 (37%), Gaps = 37/199 (18%)

Query: 68  PMRGQWGW----GAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVW 123
           P RG  G     GA    R  S   AGPP + +     G P  G      GPP++ +   
Sbjct: 428 PGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR--- 484

Query: 124 SAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEP-SSMLTCPQQPHRATSPAAPGL-- 180
              PP+ Q        +HLS   G G   G+ LP+   S  + PQQP    +P   G   
Sbjct: 485 --PPPQGQ--------QHLS---GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR 531

Query: 181 QECPRTG----------PSQPSMQLPSYPEEGSGLSRGHKDARP----GPPGQEREQVLR 226
           Q  P  G          P+ PS Q  + P + +  +     A P     PPG ++ Q   
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591

Query: 227 ACAPQPQHQVDCSAVGGPV 245
              P P      ++  GPV
Sbjct: 592 QKPPGPAGPTRQASQAGPV 610



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 39/143 (27%), Positives = 53/143 (37%), Gaps = 17/143 (11%)

Query: 140 RHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECP--RTGPSQPSMQLPS 197
           R   +   PGR      P P ++   P     +  PA P  Q+ P  + GP QP    P 
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGAL---PLGRQTSQQPAGPPAQQRPPPQGGPPQPG---PG 473

Query: 198 YPEEGSGLSRGHKDARPGPPGQEREQVL--RACAPQPQHQVDCSAVGGPVAAGEKPPVSR 255
              +G  L +     RP P GQ+    L   A +P PQ     ++     A+   PP   
Sbjct: 474 PQRQGPPLQQ-----RPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQ- 527

Query: 256 LGSAHQGLPTSAFEGACHALGDP 278
            G   Q  P +   GA  A   P
Sbjct: 528 -GQGRQSRPVAGGPGAPPAARPP 549


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 56/231 (24%), Positives = 83/231 (35%), Gaps = 26/231 (11%)

Query: 30  RAPDVGSVGVGRRVPD--AGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVW 87
           + P  G++ +GR+     AG        P  G    G GP  +G        P   Q + 
Sbjct: 435 QTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLS 494

Query: 88  GAGPPMRGQWGWGAGSPMRG--QSVWGAGPPMRGQIVWS---AGPPRVQGTLVHCPTRHL 142
           G GPP          SP     Q    A PP +GQ   S   AG P         P    
Sbjct: 495 GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP------PAARP 548

Query: 143 SQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPR------TGPSQPSMQLP 196
                P RQ G       + ++ P  P  + +P     ++ P        GP++ + Q  
Sbjct: 549 PASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAG 608

Query: 197 SYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVD---CSAVGGP 244
             P  G   ++  + + PGP G+ + Q+    A +P   V     +A GGP
Sbjct: 609 PVPRTGPPTTQQPRPSGPGPAGRPKPQL----AQKPSQDVPPPATAAAGGP 655



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 55/199 (27%), Positives = 75/199 (37%), Gaps = 37/199 (18%)

Query: 68  PMRGQWGW----GAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVW 123
           P RG  G     GA    R  S   AGPP + +     G P  G      GPP++ +   
Sbjct: 428 PGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR--- 484

Query: 124 SAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEP-SSMLTCPQQPHRATSPAAPGL-- 180
              PP+ Q        +HLS   G G   G+ LP+   S  + PQQP    +P   G   
Sbjct: 485 --PPPQGQ--------QHLS---GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGR 531

Query: 181 QECPRTG----------PSQPSMQLPSYPEEGSGLSRGHKDARP----GPPGQEREQVLR 226
           Q  P  G          P+ PS Q  + P + +  +     A P     PPG ++ Q   
Sbjct: 532 QSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591

Query: 227 ACAPQPQHQVDCSAVGGPV 245
              P P      ++  GPV
Sbjct: 592 QKPPGPAGPTRQASQAGPV 610



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 39/143 (27%), Positives = 53/143 (37%), Gaps = 17/143 (11%)

Query: 140 RHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECP--RTGPSQPSMQLPS 197
           R   +   PGR      P P ++   P     +  PA P  Q+ P  + GP QP    P 
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGAL---PLGRQTSQQPAGPPAQQRPPPQGGPPQPG---PG 473

Query: 198 YPEEGSGLSRGHKDARPGPPGQEREQVL--RACAPQPQHQVDCSAVGGPVAAGEKPPVSR 255
              +G  L +     RP P GQ+    L   A +P PQ     ++     A+   PP   
Sbjct: 474 PQRQGPPLQQ-----RPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQ- 527

Query: 256 LGSAHQGLPTSAFEGACHALGDP 278
            G   Q  P +   GA  A   P
Sbjct: 528 -GQGRQSRPVAGGPGAPPAARPP 549


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 91/323 (28%), Positives = 114/323 (35%), Gaps = 77/323 (23%)

Query: 16  GAQGPRCGVSVWGCRAP--------DVGSVG-VGRRVPDAGSECVGHRAPDAGSVCGGAG 66
           GA GP   +   G   P        + G VG VG   P   S   G R   A  + GG G
Sbjct: 598 GAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERG--AAGIPGGKG 655

Query: 67  ----PPMRGQWGWGAGSPMRGQ--SVWGAGPPM----RGQWGWGA--------GSPMRGQ 108
               P +RG+ G       RG   +V   GP      RG+ G           GSP    
Sbjct: 656 EKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERG 715

Query: 109 SVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTC--P 166
            V  AGP        +AG P  +G           +R   G +  N +  P+  +    P
Sbjct: 716 EVGPAGPNGFAGPAGAAGQPGAKG-----------ERGAKGPKGENGVVGPTGPVGAAGP 764

Query: 167 QQPHRATSPAA-------PGLQECP----RTGPSQPSMQLPSYPEEGSGLSRGHKDARPG 215
             P+    PA        PG+   P    RTGP  PS           G+S       PG
Sbjct: 765 AGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPS-----------GIS-----GPPG 808

Query: 216 PPGQEREQVLRACAPQPQ---HQVDCSAVGGPVAAGEKPPVSRLGSAHQGLPTSAFEGAC 272
           PPG   ++ LR             +  AVG P  AGEK P    G+A  G P +   G  
Sbjct: 809 PPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTA--GPPGT--PGPQ 864

Query: 273 HALGDPGIFTGLEAGDRTVSVPG 295
             LG PGI  GL        +PG
Sbjct: 865 GLLGAPGIL-GLPGSRGERGLPG 886


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 45/145 (31%), Positives = 52/145 (35%), Gaps = 38/145 (26%)

Query: 142 LSQRRGPGRQCGNSLPEPSSMLTCP----------------QQPHRATSPAAPGLQECP- 184
           LSQR  P  QC +  P   +   CP                  P +  SPA+P    CP 
Sbjct: 337 LSQRHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASP---SCPS 393

Query: 185 ----RTGPSQPSMQLPSYPEEGSGL--SRGHKDARPGPPGQEREQVL--RACAPQPQHQV 236
               R  P  PS Q PS P+  S +  S      RP PP    E+ L  RA A  P H V
Sbjct: 394 PVPQRRSPVPPSCQSPS-PQRRSPVPPSCPAPQPRPPPPPPPGERTLAERAYAKPPSHHV 452

Query: 237 DCSAVG---------GPVAAGEKPP 252
                G         G   AG  PP
Sbjct: 453 KAGFQGRRSYSELAEGAAYAGASPP 477


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 55/227 (24%), Positives = 69/227 (30%), Gaps = 41/227 (18%)

Query: 59  GSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPM------RGQSVWG 112
           G+  GG G    G  G+G G    G   +G G P      + AG P       R     G
Sbjct: 64  GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGG 123

Query: 113 AGPPM-----RGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEP-------- 159
           + PP+     R        PP   G     P      R GP     N +P P        
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRF---PVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180

Query: 160 --------SSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKD 211
                   S+       PH   SP  PG    P  GP+ P    P     G+ L  G   
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP----PFPGNRGTALGGGSIR 236

Query: 212 ARP---GPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVSR 255
             P     P   R  +     P P   +D      P   G +P + R
Sbjct: 237 QSPLSSSSPFSNRPPL----PPTPSRALDDKPPPPPPPVGNRPSIHR 279



 Score = 32.7 bits (73), Expect = 0.39
 Identities = 47/196 (23%), Positives = 63/196 (32%), Gaps = 37/196 (18%)

Query: 91  PPMRGQWGWGAG------SPMRGQSVWGAGPPM--RGQIVWSAGPPRVQGTLVHCPTRHL 142
           PP  G  G   G      SP+   S +   PP+           PP     + + P+ H 
Sbjct: 220 PPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHR 279

Query: 143 SQRRGPGRQCGN----SLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSY 198
                P  Q       S P PS+    P  P   + P  P     P    S  + + P  
Sbjct: 280 EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP-----PLPPSSSGNDETPRL 334

Query: 199 PEEGSGLSR--------GHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEK 250
           P+    LS         G     P PP +     +R          D     GP+     
Sbjct: 335 PQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR----------DPPGRSGPLPP--P 382

Query: 251 PPVSRLGSAHQGLPTS 266
           PPVSR GS  + LP +
Sbjct: 383 PPVSRNGSTSRALPAT 398


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 55/227 (24%), Positives = 69/227 (30%), Gaps = 41/227 (18%)

Query: 59  GSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPM------RGQSVWG 112
           G+  GG G    G  G+G G    G   +G G P      + AG P       R     G
Sbjct: 64  GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGG 123

Query: 113 AGPPM-----RGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEP-------- 159
           + PP+     R        PP   G     P      R GP     N +P P        
Sbjct: 124 SRPPLLPPGGRSTSAKPFSPPSGPGRF---PVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180

Query: 160 --------SSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKD 211
                   S+       PH   SP  PG    P  GP+ P    P     G+ L  G   
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP----PFPGNRGTALGGGSIR 236

Query: 212 ARP---GPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVSR 255
             P     P   R  +     P P   +D      P   G +P + R
Sbjct: 237 QSPLSSSSPFSNRPPL----PPTPSRALDDKPPPPPPPVGNRPSIHR 279



 Score = 32.7 bits (73), Expect = 0.39
 Identities = 47/196 (23%), Positives = 63/196 (32%), Gaps = 37/196 (18%)

Query: 91  PPMRGQWGWGAG------SPMRGQSVWGAGPPM--RGQIVWSAGPPRVQGTLVHCPTRHL 142
           PP  G  G   G      SP+   S +   PP+           PP     + + P+ H 
Sbjct: 220 PPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHR 279

Query: 143 SQRRGPGRQCGN----SLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSY 198
                P  Q       S P PS+    P  P   + P  P     P    S  + + P  
Sbjct: 280 EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP-----PLPPSSSGNDETPRL 334

Query: 199 PEEGSGLSR--------GHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEK 250
           P+    LS         G     P PP +     +R          D     GP+     
Sbjct: 335 PQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR----------DPPGRSGPLPP--P 382

Query: 251 PPVSRLGSAHQGLPTS 266
           PPVSR GS  + LP +
Sbjct: 383 PPVSRNGSTSRALPAT 398


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 47/162 (29%), Positives = 61/162 (37%), Gaps = 30/162 (18%)

Query: 94  RGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGP-GRQC 152
           R + G G G   RG    G G   RG +     PP         P   L+Q RGP G   
Sbjct: 7   RSRGGGGGGFHRRGG---GGG---RGGLHDFRSPP---------PGMGLNQNRGPMGPGP 51

Query: 153 GNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDA 212
           G S P+P      P Q  +   P  P  Q+ P   P QP    P +P+        H+  
Sbjct: 52  GQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPP---PHQP----PPHPQP-------HQQQ 97

Query: 213 RPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVS 254
           +P PP Q+  + + A  P P   V  +      A    PP S
Sbjct: 98  QPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTS 139


>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
          Length = 676

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 45/170 (26%), Positives = 56/170 (32%), Gaps = 26/170 (15%)

Query: 135 VHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQ------PHRATSPAAPGLQEC-PRTG 187
           +H   R  + +  PG  C  +   P+     P        P R  SP   GL    PR  
Sbjct: 102 LHSRRRREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGP 161

Query: 188 PSQPSMQ-------------LPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQH 234
           P QP  +              P +P     +       +PGP GQ+ E+      P    
Sbjct: 162 PGQPGTRGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGE 221

Query: 235 QVDCSAVGGPVAAGEKPPVSRLGSAHQGLP----TSAFEGACHALGDPGI 280
           Q   S  G P   G   P   LG  H GLP         G     GDPGI
Sbjct: 222 QSQASIQGPPGPPGPPGPSGPLG--HPGLPGPMGPPGLPGPPGPKGDPGI 269



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 70/255 (27%), Positives = 97/255 (38%), Gaps = 29/255 (11%)

Query: 57  DAGSVCGGA----GPP-MRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVW 111
           DAG+  GG     GPP + G  G    + + GQ      P  +G+ G  AG         
Sbjct: 334 DAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG-AAGEQGPDGPKG 392

Query: 112 GAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHR 171
             G P +G++V   G   +   L    T  L    G   Q G     P      P Q   
Sbjct: 393 SKGEPGKGEMVDYNG--NINEALQEIRTLALMGPPGLPGQIG-----PPGAPGIPGQKGE 445

Query: 172 ATSPAAPGL--QECPRTGPSQPSMQLPSYP--EEGSGLSRGHKDARPGPPGQEREQVLRA 227
              P  PG   ++ PR  P       P  P  ++G    +G ++  PG PG++ E+    
Sbjct: 446 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG-ENGHPGSPGEKGEKGETG 504

Query: 228 CAPQPQHQVDCSAVGGPVA-----AGEKPPVSRLGSAHQGLPTSAFE-GACHALGDPGIF 281
            A  P  + +    G P A      G + P    G   QG+P    E G   A G+ G F
Sbjct: 505 QAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGL--QGVPGPKGEAGLDGAKGEKG-F 561

Query: 282 TGLEAGDR-TVSVPG 295
            G E GDR  + +PG
Sbjct: 562 QG-EKGDRGPLGLPG 575



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 45/173 (26%), Positives = 61/173 (35%), Gaps = 28/173 (16%)

Query: 66  GPP-MRGQWG--WGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIV 122
           GPP + GQ G     G P +   +   GPP         G P         GPP +    
Sbjct: 423 GPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKD--- 479

Query: 123 WSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGN------SLPEPSSMLTCPQQPHRATSPA 176
              GPP V+G   H  +      +G   Q G+      +  + +     P  P     P 
Sbjct: 480 ---GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPG 536

Query: 177 APGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHK-----------DARPGPPG 218
            PGLQ  P  GP   +    +  E+G    +G +           D RPGPPG
Sbjct: 537 PPGLQGVP--GPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 587


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 49/180 (27%), Positives = 66/180 (36%), Gaps = 10/180 (5%)

Query: 84  QSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLS 143
           Q +  A PP +        S   G       P +        GP +     V  P + L+
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTP-KPLA 422

Query: 144 QRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPA---APGLQECPRTGPSQPSMQLPSYPE 200
           Q+  PG Q     P P+   T  QQP     PA    PG     +TGP++P  QLP  P 
Sbjct: 423 QQ--PGLQSPAKAPGPTK--TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPG-PA 477

Query: 201 EGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGE-KPPVSRLGSA 259
           +      G     P  PG  +    +  + +P  Q    A   P   G  KPP  + GSA
Sbjct: 478 KPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 49/180 (27%), Positives = 66/180 (36%), Gaps = 10/180 (5%)

Query: 84  QSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLS 143
           Q +  A PP +        S   G       P +        GP +     V  P + L+
Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTP-KPLA 422

Query: 144 QRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPA---APGLQECPRTGPSQPSMQLPSYPE 200
           Q+  PG Q     P P+   T  QQP     PA    PG     +TGP++P  QLP  P 
Sbjct: 423 QQ--PGLQSPAKAPGPTK--TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPG-PA 477

Query: 201 EGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGE-KPPVSRLGSA 259
           +      G     P  PG  +    +  + +P  Q    A   P   G  KPP  + GSA
Sbjct: 478 KPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSA 537


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 68/273 (24%), Positives = 84/273 (30%), Gaps = 39/273 (14%)

Query: 35  GSVGVGRRVPDAGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPP-- 92
           G+ G G   P  G+       P AG    G G P R     G  SP R     G  PP  
Sbjct: 69  GAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRP----GPPSPRRPLVPAGPAPPAA 124

Query: 93  -MRGQWGWGAGS--PMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHC--------PTRH 141
            +R      AGS  P+   +   AGP         AGP +  G             P   
Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPA-----PAGPAKPAGPAALAARAGPGPGPGPG 179

Query: 142 LSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQE-----CPRTGPSQPSMQLP 196
                GPG+  G    +  +        H A +PA   +        P   P+ P   + 
Sbjct: 180 PGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239

Query: 197 SYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA------VGGPVAAGEK 250
           + P  G+        A P PP         A  P P       A       G P AA   
Sbjct: 240 TPPFVGAAAPPA--PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAV 297

Query: 251 PPVSRL---GSAHQG-LPTSAFEGACHALGDPG 279
           PP +     GSA     P  A  G     G PG
Sbjct: 298 PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPG 330



 Score = 37.0 bits (84), Expect = 0.021
 Identities = 67/294 (22%), Positives = 93/294 (31%), Gaps = 60/294 (20%)

Query: 30  RAPDVGSVGVGRRVPDAGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGA 89
           R P  GS G    VP A +   G     AG         +  + G G G P  G    G 
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG-PGPGP---GP 182

Query: 90  GPPMRGQWGWGAGSPMRGQSVW-----GAGPPMRGQIVWSAGP--------PRVQGTLVH 136
           GP      G GA   + G +        A P +    + + GP        P   GT++ 
Sbjct: 183 GPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVS---LVNNGPAALLPLPKPAAPGTVIQ 239

Query: 137 CPTR-HLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQL 195
            P     +    P      + P P++    P  P     P AP     P   P+ P    
Sbjct: 240 TPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPP-----PPAPATLARPPGHPAGPPTAA 294

Query: 196 PSYPEEGSGLSRGHKDARPGP------------------------PGQERE---QVLRAC 228
           P+ P   +  + G   A P P                        PG + E   +V++A 
Sbjct: 295 PAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAA 354

Query: 229 APQPQH-------QVDCSAVGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHAL 275
            P  Q            S V GP   G  P  + +     G PT   +GA  A+
Sbjct: 355 PPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAV 408


>gi|238550198 synaptotagmin III [Homo sapiens]
          Length = 590

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 51/181 (28%), Positives = 70/181 (38%), Gaps = 25/181 (13%)

Query: 82  RGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRH 141
           +G S  G GP +R   G G G       V G G  +   +    G P + G   H    H
Sbjct: 86  KGGSAVGGGP-LRKDLGPGVGL---AGLVGGGGHHLAAGL---GGHPLLGGPHHHAHAAH 138

Query: 142 ---LSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSY 198
               ++   PG   G+  PEPS  L     P  A +  A G++      PSQ S +LPS 
Sbjct: 139 HPPFAELLEPGSLGGSDTPEPS-YLDMDSYPEAAAAAVAAGVK------PSQTSPELPSE 191

Query: 199 PEEGSGLSRGHKDARPGPPGQEREQVLR-------ACAPQPQHQVDCSAVGGPVAAGEKP 251
              GSGL          P  Q  +QV            P+P  Q   ++   P ++ E+P
Sbjct: 192 GGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDP-SSEERP 250

Query: 252 P 252
           P
Sbjct: 251 P 251


>gi|238550196 synaptotagmin III [Homo sapiens]
          Length = 590

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 51/181 (28%), Positives = 70/181 (38%), Gaps = 25/181 (13%)

Query: 82  RGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRH 141
           +G S  G GP +R   G G G       V G G  +   +    G P + G   H    H
Sbjct: 86  KGGSAVGGGP-LRKDLGPGVGL---AGLVGGGGHHLAAGL---GGHPLLGGPHHHAHAAH 138

Query: 142 ---LSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSY 198
               ++   PG   G+  PEPS  L     P  A +  A G++      PSQ S +LPS 
Sbjct: 139 HPPFAELLEPGSLGGSDTPEPS-YLDMDSYPEAAAAAVAAGVK------PSQTSPELPSE 191

Query: 199 PEEGSGLSRGHKDARPGPPGQEREQVLR-------ACAPQPQHQVDCSAVGGPVAAGEKP 251
              GSGL          P  Q  +QV            P+P  Q   ++   P ++ E+P
Sbjct: 192 GGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDP-SSEERP 250

Query: 252 P 252
           P
Sbjct: 251 P 251


>gi|14150054 synaptotagmin III [Homo sapiens]
          Length = 590

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 51/181 (28%), Positives = 70/181 (38%), Gaps = 25/181 (13%)

Query: 82  RGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLVHCPTRH 141
           +G S  G GP +R   G G G       V G G  +   +    G P + G   H    H
Sbjct: 86  KGGSAVGGGP-LRKDLGPGVGL---AGLVGGGGHHLAAGL---GGHPLLGGPHHHAHAAH 138

Query: 142 ---LSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSY 198
               ++   PG   G+  PEPS  L     P  A +  A G++      PSQ S +LPS 
Sbjct: 139 HPPFAELLEPGSLGGSDTPEPS-YLDMDSYPEAAAAAVAAGVK------PSQTSPELPSE 191

Query: 199 PEEGSGLSRGHKDARPGPPGQEREQVLR-------ACAPQPQHQVDCSAVGGPVAAGEKP 251
              GSGL          P  Q  +QV            P+P  Q   ++   P ++ E+P
Sbjct: 192 GGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTSQPDP-SSEERP 250

Query: 252 P 252
           P
Sbjct: 251 P 251


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 85/289 (29%), Positives = 99/289 (34%), Gaps = 37/289 (12%)

Query: 1    MGSAAQGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGS 60
            +G A  GP+      G  GPR    V G R P  G V  G   P       G R P    
Sbjct: 1545 VGPAVAGPKGEKGDVGPAGPRGATGVQGERGPP-GLVLPGDPGPKGDP---GDRGPI--G 1598

Query: 61   VCGGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMR-GQWGWGAGSPMRGQSVWGAGPPMRG 119
            + G AGPP         G P R       GP  R G+ G       +G      GPP   
Sbjct: 1599 LTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVG------EKGDE----GPPGDP 1648

Query: 120  QIVWSAGPPRVQGTL-VHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAP 178
             +   AG   ++G   V  P      +  PG    N  P  S       +P     P  P
Sbjct: 1649 GLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEP---GPPGPP 1705

Query: 179  GLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDC 238
            G      TGP       P   + G    RG K   PG PG   E+ +      P  Q D 
Sbjct: 1706 G--RLVDTGPGAREKGEPG--DRGQEGPRGPK-GDPGLPGAPGERGIEGFRGPPGPQGD- 1759

Query: 239  SAVGGPVAAGEK----PPVSRLGSAHQGLPTSAF----EGACHALGDPG 279
              V GP  AGEK    PP     S   G P +A      GA    GDPG
Sbjct: 1760 PGVRGP--AGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPG 1806



 Score = 36.6 bits (83), Expect = 0.027
 Identities = 57/208 (27%), Positives = 69/208 (33%), Gaps = 35/208 (16%)

Query: 16   GAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGSVCGGAG-PPMRGQWG 74
            G QGP    +  G R    G  G   R P +         P A  + G  G P  RG  G
Sbjct: 1284 GPQGPPGSATAKGER----GFPGADGR-PGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPG 1338

Query: 75   WGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPP-MRGQI--VWSAGPPRVQ 131
                   +G+     G P +   G G G P R      +GPP  RG +      GPP + 
Sbjct: 1339 ERGPRGPKGEP----GAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLP 1394

Query: 132  GTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQP 191
            GT +        +R  PG   G   P                 P  PGL       P  P
Sbjct: 1395 GTAMKGDKGDRGERGPPGPGEGGIAPG---------------EPGLPGL-------PGSP 1432

Query: 192  SMQLPSYPEEGSGLSRGHKDARPGPPGQ 219
              Q P  P    G     +D  PG PGQ
Sbjct: 1433 GPQGPVGPPGKKGEKGDSEDGAPGLPGQ 1460



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 70/227 (30%), Positives = 83/227 (36%), Gaps = 27/227 (11%)

Query: 6    QGPRCGVRVCGAQGPRCGVSVWGCRAPDVGSVG-VGRRVPDAGSECVGHRAP--DAGSVC 62
            +GP     + G  G R      G R P VG  G  G    D  +   G   P  D G   
Sbjct: 1642 EGPPGDPGLPGKAGERGLRGAPGVRGP-VGEKGDQGDPGEDGRNGSPGSSGPKGDRGEP- 1699

Query: 63   GGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIV 122
            G  GPP R     G G+  +G+      P  RGQ G     P     + GA P  RG I 
Sbjct: 1700 GPPGPPGR-LVDTGPGAREKGE------PGDRGQEG--PRGPKGDPGLPGA-PGERG-IE 1748

Query: 123  WSAGPPRVQGTL-VHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAA---- 177
               GPP  QG   V  P      R  PG   G S  +       P  P+ A   A     
Sbjct: 1749 GFRGPPGPQGDPGVRGPAGEKGDRGPPGLD-GRSGLDGKPGAAGPSGPNGAAGKAGDPGR 1807

Query: 178  ---PGLQ-ECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQE 220
               PGL+ E    GPS P   LP  P E        K+  PG PG++
Sbjct: 1808 DGLPGLRGEQGLPGPSGPP-GLPGKPGEDGKPGLNGKNGEPGDPGED 1853



 Score = 32.0 bits (71), Expect = 0.67
 Identities = 79/285 (27%), Positives = 97/285 (34%), Gaps = 39/285 (13%)

Query: 16   GAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSECVGHRAPDAGSVCGGAGPP----MRG 71
            G  GPR G      RA + G  G   +    G +  G +      V G  GPP    ++G
Sbjct: 2333 GLPGPR-GEKGEAGRAGEPGDPGEDGQKGAPGPK--GFKGDPGVGVPGSPGPPGPPGVKG 2389

Query: 72   QWGWGA--GSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPR 129
              G     G+P         GP  RG+ G    S  RG     AGPP R  I    GPP 
Sbjct: 2390 DLGLPGLPGAPGVVGFPGQTGP--RGEMGQPGPSGERGL----AGPPGREGIPGPLGPPG 2443

Query: 130  VQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPR--TG 187
              G++        S  +G     G  LP P        +P        PG QE PR  TG
Sbjct: 2444 PPGSV---GPPGASGLKGDKGDPGVGLPGPRGE---RGEPGIRGEDGRPG-QEGPRGLTG 2496

Query: 188  PSQPSMQLPSYPEEGSGLSRGHKD------ARPGPPGQEREQVLRACAPQPQHQVDCSAV 241
            P     +     + GS   +G K         PGP G + +   R        +      
Sbjct: 2497 PPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDN 2556

Query: 242  GGPVAAGEKPPVSRLGSAHQGLP-------TSAFEGACHALGDPG 279
            G P   G K      GSA  GLP            GA    GDPG
Sbjct: 2557 GDPGDKGSKGEPGDKGSA--GLPGLRGLLGPQGQPGAAGIPGDPG 2599



 Score = 28.9 bits (63), Expect = 5.6
 Identities = 39/159 (24%), Positives = 49/159 (30%), Gaps = 21/159 (13%)

Query: 128  PRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTG 187
            PR +   V+CP     Q+  PG         P      P  P       APG Q  P + 
Sbjct: 1242 PRPEPCPVYCPK---GQKGEPGEMGLRGQVGP------PGDPGLPGRTGAPGPQGPPGSA 1292

Query: 188  PSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAA 247
             ++     P          R      PG PG +    L      P  +      G P A 
Sbjct: 1293 TAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRGPKGEPGAP 1352

Query: 248  GEKPPVSRLGSAHQGLP-------TSAFEGACHALGDPG 279
            G+      +G    GLP        S   G    LGDPG
Sbjct: 1353 GQV-----IGGEGPGLPGRKGDPGPSGPPGPRGPLGDPG 1386


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 62/251 (24%), Positives = 78/251 (31%), Gaps = 54/251 (21%)

Query: 64   GAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVW 123
            G  P +RG W  G  SP  G       P   G  G G GS          GP +R    +
Sbjct: 1042 GPQPSLRG-WRGGGPSPTPG----APSPSHHGSAGGGGGSSQ--------GPALR----Y 1084

Query: 124  SAGPPRVQGTLVHCPTRHLSQRRGP---------GRQCGNSLPEPSSMLTCPQQPHRATS 174
               PPR     ++ P R    R+GP           Q G  LP P+   T P  P    +
Sbjct: 1085 FQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLP-PAPSPTSPASPQPPPA 1143

Query: 175  PAAPG----------LQECPRTGPSQPSMQ-------LPSYPEEGSGLSRGHKDARPGPP 217
             AAP           + + P T  S  S Q        P+ PE   G   G     P P 
Sbjct: 1144 VAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSSPSPAP- 1202

Query: 218  GQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVSRLGSAHQGLPTSAFEGACHALGD 277
                     A +P P           P         S+ G+A  G           A   
Sbjct: 1203 ---------AMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRR 1253

Query: 278  PGIFTGLEAGD 288
              +F   +AGD
Sbjct: 1254 STLFLSTDAGD 1264



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 54/250 (21%), Positives = 78/250 (31%), Gaps = 68/250 (27%)

Query: 86   VWGAGPP--MRGQWGWGAGSPMRGQSVWGAGPPMRGQIV--------------------- 122
            +WGA PP   R + G+ AG   + +S+  + P  R  ++                     
Sbjct: 1407 LWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGTEP 1466

Query: 123  ----------W-SAGPPRVQGTLVHC-------PTRHLSQRRGPGRQCGNSLPEPSSMLT 164
                      W SA P   +   +H        P   ++  RGP  + G  +P PS   +
Sbjct: 1467 PAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRS 1526

Query: 165  CPQQPHRATSPAAPGLQECPR--TGPSQPSMQ-----------LPSYPEEGSGLSRGHKD 211
             P  P   TSP A      P     P  PS+            LP   E  +   +    
Sbjct: 1527 VPPSP---TSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESP 1583

Query: 212  ARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVSRLGS---AHQGLPTSAF 268
              PGPP              P        V  P  A   P +    S   ++     +  
Sbjct: 1584 LTPGPP--------HPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLT 1635

Query: 269  EGACHALGDP 278
            +GA  A GDP
Sbjct: 1636 QGASAAPGDP 1645


>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
          Length = 664

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 43/164 (26%), Positives = 55/164 (33%), Gaps = 26/164 (15%)

Query: 135 VHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQEC-PRTGPSQPSM 193
           +H   R  + +  PG  C  +   P+       +P    SP   GL    PR  P QP  
Sbjct: 102 LHSRRRREAPKTSPGCNCPPAFQGPTG------RPGLPGSPGDAGLSIIGPRGPPGQPGT 155

Query: 194 Q-------------LPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA 240
           +              P +P     +       +PGP GQ+ E+      P    Q   S 
Sbjct: 156 RGFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASI 215

Query: 241 VGGPVAAGEKPPVSRLGSAHQGLP----TSAFEGACHALGDPGI 280
            G P   G   P   LG  H GLP         G     GDPGI
Sbjct: 216 QGPPGPPGPPGPSGPLG--HPGLPGPMGPPGLPGPPGPKGDPGI 257



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 70/255 (27%), Positives = 97/255 (38%), Gaps = 29/255 (11%)

Query: 57  DAGSVCGGA----GPP-MRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVW 111
           DAG+  GG     GPP + G  G    + + GQ      P  +G+ G  AG         
Sbjct: 322 DAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG-AAGEQGPDGPKG 380

Query: 112 GAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHR 171
             G P +G++V   G   +   L    T  L    G   Q G     P      P Q   
Sbjct: 381 SKGEPGKGEMVDYNG--NINEALQEIRTLALMGPPGLPGQIG-----PPGAPGIPGQKGE 433

Query: 172 ATSPAAPGL--QECPRTGPSQPSMQLPSYP--EEGSGLSRGHKDARPGPPGQEREQVLRA 227
              P  PG   ++ PR  P       P  P  ++G    +G ++  PG PG++ E+    
Sbjct: 434 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG-ENGHPGSPGEKGEKGETG 492

Query: 228 CAPQPQHQVDCSAVGGPVA-----AGEKPPVSRLGSAHQGLPTSAFE-GACHALGDPGIF 281
            A  P  + +    G P A      G + P    G   QG+P    E G   A G+ G F
Sbjct: 493 QAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGL--QGVPGPKGEAGLDGAKGEKG-F 549

Query: 282 TGLEAGDR-TVSVPG 295
            G E GDR  + +PG
Sbjct: 550 QG-EKGDRGPLGLPG 563



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 45/173 (26%), Positives = 61/173 (35%), Gaps = 28/173 (16%)

Query: 66  GPP-MRGQWG--WGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIV 122
           GPP + GQ G     G P +   +   GPP         G P         GPP +    
Sbjct: 411 GPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKD--- 467

Query: 123 WSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGN------SLPEPSSMLTCPQQPHRATSPA 176
              GPP V+G   H  +      +G   Q G+      +  + +     P  P     P 
Sbjct: 468 ---GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPG 524

Query: 177 APGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHK-----------DARPGPPG 218
            PGLQ  P  GP   +    +  E+G    +G +           D RPGPPG
Sbjct: 525 PPGLQGVP--GPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 575


>gi|239742249 PREDICTED: hypothetical protein XP_002342465 [Homo
           sapiens]
          Length = 179

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 47/192 (24%), Positives = 62/192 (32%), Gaps = 43/192 (22%)

Query: 63  GGAGPPMRGQWGWGAG-SPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQI 121
           GG  PP+  Q  W  G S  +G  VW + P  +       G   R   +W      +  I
Sbjct: 4   GGITPPLEAQQPWRGGVSGSQGLQVWNSNPKCQ-----LCGHQPRNTGLWPNRSSFQTDI 58

Query: 122 VWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCP-QQPHRATSPAAPGL 180
             SAG                         C  + P        P  Q   +  P+    
Sbjct: 59  SKSAG----------------------NTGCATAAPAHGGWQWAPLAQGQLSHRPSGTDR 96

Query: 181 QECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSA 240
           +  PR GP+QP  +            RG+    P  PG  R Q  +  A   QH   C  
Sbjct: 97  KVAPR-GPTQPPAR------------RGNHLRPPQSPGASRAQEPKFPASGHQHSPGCPR 143

Query: 241 VGGPVAAGEKPP 252
            GGP+  GE  P
Sbjct: 144 AGGPL-RGEPGP 154


>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
          Length = 655

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 41/142 (28%), Positives = 48/142 (33%), Gaps = 22/142 (15%)

Query: 157 PEPSSMLTCPQQPHRATSPAAPGLQEC-PRTGPSQPSMQ-------------LPSYPEEG 202
           P+ S    CP  P    SP   GL    PR  P QP  +              P +P   
Sbjct: 111 PKTSPGCNCPPAPQG--SPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPK 168

Query: 203 SGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVSRLGSAHQG 262
             +       +PGP GQ+ E+      P    Q   S  G P   G   P   LG  H G
Sbjct: 169 GDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLG--HPG 226

Query: 263 LP----TSAFEGACHALGDPGI 280
           LP         G     GDPGI
Sbjct: 227 LPGPMGPPGLPGPPGPKGDPGI 248



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 70/255 (27%), Positives = 97/255 (38%), Gaps = 29/255 (11%)

Query: 57  DAGSVCGGA----GPP-MRGQWGWGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVW 111
           DAG+  GG     GPP + G  G    + + GQ      P  +G+ G  AG         
Sbjct: 313 DAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERG-AAGEQGPDGPKG 371

Query: 112 GAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHR 171
             G P +G++V   G   +   L    T  L    G   Q G     P      P Q   
Sbjct: 372 SKGEPGKGEMVDYNG--NINEALQEIRTLALMGPPGLPGQIG-----PPGAPGIPGQKGE 424

Query: 172 ATSPAAPGL--QECPRTGPSQPSMQLPSYP--EEGSGLSRGHKDARPGPPGQEREQVLRA 227
              P  PG   ++ PR  P       P  P  ++G    +G ++  PG PG++ E+    
Sbjct: 425 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKG-ENGHPGSPGEKGEKGETG 483

Query: 228 CAPQPQHQVDCSAVGGPVA-----AGEKPPVSRLGSAHQGLPTSAFE-GACHALGDPGIF 281
            A  P  + +    G P A      G + P    G   QG+P    E G   A G+ G F
Sbjct: 484 QAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGL--QGVPGPKGEAGLDGAKGEKG-F 540

Query: 282 TGLEAGDR-TVSVPG 295
            G E GDR  + +PG
Sbjct: 541 QG-EKGDRGPLGLPG 554



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 45/173 (26%), Positives = 61/173 (35%), Gaps = 28/173 (16%)

Query: 66  GPP-MRGQWG--WGAGSPMRGQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIV 122
           GPP + GQ G     G P +   +   GPP         G P         GPP +    
Sbjct: 402 GPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKD--- 458

Query: 123 WSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGN------SLPEPSSMLTCPQQPHRATSPA 176
              GPP V+G   H  +      +G   Q G+      +  + +     P  P     P 
Sbjct: 459 ---GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPG 515

Query: 177 APGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHK-----------DARPGPPG 218
            PGLQ  P  GP   +    +  E+G    +G +           D RPGPPG
Sbjct: 516 PPGLQGVP--GPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPG 566


>gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo
           sapiens]
          Length = 731

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 119 GQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAP 178
           GQ++W+ GP    G+L       LSQ      Q  +  P P     C      +T   +P
Sbjct: 99  GQLLWTPGPKLFHGSL-----EELSQALPSRAQASSEQPPPLPRKMCRSV---STDNLSP 150

Query: 179 GLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQP 232
            L +  + GPS  S+     P E S  + G +     PP       LR C   P
Sbjct: 151 SLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSP 204


>gi|122939151 Rho GTPase activating protein 9 isoform 2 [Homo
           sapiens]
          Length = 640

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 119 GQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAP 178
           GQ++W+ GP    G+L       LSQ      Q  +  P P     C      +T   +P
Sbjct: 99  GQLLWTPGPKLFHGSL-----EELSQALPSRAQASSEQPPPLPRKMCRSV---STDNLSP 150

Query: 179 GLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQP 232
            L +  + GPS  S+     P E S  + G +     PP       LR C   P
Sbjct: 151 SLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSP 204


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 74/292 (25%), Positives = 102/292 (34%), Gaps = 30/292 (10%)

Query: 16  GAQGPRCGVSVWGCRAP--DVGSVGVGRRVPDAGSECVGHRAPDAGSVCGGAGPPMRGQW 73
           GAQGP     + G      ++G  G+    P A    +G R P   +   GA P +RG  
Sbjct: 378 GAQGPPGPPGINGSPGGKGEMGPAGI----PGAPG-LMGARGPPGPAGANGA-PGLRG-- 429

Query: 74  GWGAGSPMRGQSVWGAGPP-MRGQWGWGAGSPMRGQSVWGAGP--PMRGQIVWSAGPPRV 130
             GAG P +  +    GP   RG+ G       +G+      P  P    +  +AG    
Sbjct: 430 --GAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGA 487

Query: 131 QGTLVHCPTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQ 190
            G         +   +GP  + G   P P+       +P R   P  PG++  P + P  
Sbjct: 488 PGFRGPAGPNGIPGEKGPAGERG--APGPAGPRGAAGEPGRDGVPGGPGMRGMPGS-PGG 544

Query: 191 PSMQLPSYPEEGSGLSRGHKDARPGPPGQE--REQVLRACAPQPQHQVDCSAV----GGP 244
           P       P    G     +  RPGPPG    R Q      P P+            GGP
Sbjct: 545 PGSDGKPGPPGSQG-----ESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGP 599

Query: 245 VAAGEKPPVSRLG-SAHQGLPTSAFEGACHALGDPGIFTGLEAGDRTVSVPG 295
              G + P  + G +  QG P     G       P    GL+    T   PG
Sbjct: 600 GGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPG 651



 Score = 35.8 bits (81), Expect = 0.046
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 166 PQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHKDARPGPPG 218
           P QP    SP  PG+ E   TGP   S Q  SY +  SG++ G     PGP G
Sbjct: 126 PGQPGSPGSPGPPGICESCPTGPQNYSPQYDSY-DVKSGVAVGGLAGYPGPAG 177



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 41/143 (28%), Positives = 51/143 (35%), Gaps = 24/143 (16%)

Query: 152 CGN-SLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEEGSGLSRGHK 210
           C N  +P       CPQ P   T P      + P+  P  P   +P    +     +   
Sbjct: 74  CPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPG--IPGRNGDPGIPGQPGS 131

Query: 211 DARPGPPGQEREQVLRACAPQPQH---QVDC------SAVGG----PVAAGEKPPVSRLG 257
              PGPPG     +  +C   PQ+   Q D        AVGG    P  AG   P    G
Sbjct: 132 PGSPGPPG-----ICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPG 186

Query: 258 -SAHQGLPTSAFEGACHALGDPG 279
            S H G P S   G     G+PG
Sbjct: 187 TSGHPGSPGS--PGYQGPPGEPG 207


>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
           [Homo sapiens]
          Length = 387

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 11/146 (7%)

Query: 83  GQSVWGAGPPMRGQWGWGAGSPMRGQ-SVWGAGPPMRGQIVWSAGPPRVQGTLV----HC 137
           GQ   G  PPM        G+ M GQ  +    PP +G     +G     G         
Sbjct: 222 GQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQG 281

Query: 138 PTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRT----GPSQ--P 191
           P   ++Q+  P         + +     PQQ +       PG Q  P      GPSQ  P
Sbjct: 282 PPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGP 341

Query: 192 SMQLPSYPEEGSGLSRGHKDARPGPP 217
             Q P+YP+       G++  +PGPP
Sbjct: 342 GPQYPNYPQGQGQQYGGYRPTQPGPP 367



 Score = 33.1 bits (74), Expect = 0.30
 Identities = 41/181 (22%), Positives = 62/181 (34%), Gaps = 29/181 (16%)

Query: 83  GQSVWGAGPPMRGQWGWGAGSPMRGQSVWGAGPPMRGQIVWSAGPPRVQGTLV-HCPTRH 141
           G +  G  PP R          M    + G GPP           P +Q  +    P  +
Sbjct: 89  GMNQSGPPPPPRSH-------NMPSDGMVGGGPPA----------PHMQNQMNGQMPGPN 131

Query: 142 LSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGPSQPSMQLPSYPEE 201
               +GPG    N L   +S +  P   H +       +       PS  SM + +    
Sbjct: 132 HMPMQGPGP---NQLNMTNSSMNMPSSSHGSMGGYNHSV-------PSSQSMPVQNQMTM 181

Query: 202 GSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVSRLGSAHQ 261
             G   G+   RP    Q  +  +    P P  Q +    GG    G++PP+  +G  +Q
Sbjct: 182 SQGQPMGNYGPRPNMSMQPNQGPMMHQQP-PSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ 240

Query: 262 G 262
           G
Sbjct: 241 G 241


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 54/178 (30%), Positives = 66/178 (37%), Gaps = 56/178 (31%)

Query: 98  GWGAGSPMRGQSV----WGAGPPMRGQIVWSAGPPRVQGTLVHCPTRHLSQRRGPGRQCG 153
           G G G+P R  +     WG+ PP   QI  + GP R    L+  PT              
Sbjct: 370 GGGIGAPRRRAAALSGPWGSPPPPPEQIHSAPGPRRPAPALLAPPT-------------- 415

Query: 154 NSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTGP-------SQPSMQ---LPSYPEEGS 203
              P P++      +P R   P  PGLQE P   P         P++Q   LP  P    
Sbjct: 416 FIFPAPTN-----GEPMR---PGPPGLQELPPLPPPTPPPTLQPPALQPTPLPVAPPLTP 467

Query: 204 GLSRGHKD------ARPG-PPGQEREQVLRACAPQPQHQVDCSAVGGPVAAGEKPPVS 254
           GL  GHK+      A P  PP    +Q     AP P      S    P  A   PPVS
Sbjct: 468 GL--GHKESALAPTAAPALPPALAADQ-----APAP------SPAPAPTVAEPSPPVS 512


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 63/240 (26%), Positives = 84/240 (35%), Gaps = 43/240 (17%)

Query: 32  PDVGSVGVGRRVPD--AGSECVGHRAPDAGSVCGGAGPPMRGQWGWGAGSPMRGQSVWGA 89
           P V  +   +RVP   A     G RA   G   GG G P+R           RG   W  
Sbjct: 15  PRVQCIRGSQRVPQPPAARSPRGPRAGGGGGDAGGGGAPVR---------RARGGGCWAR 65

Query: 90  GPPMRGQWGWGAGSPMRGQSVWGAGPP---------MRGQIVWSAG---PPRVQGTLVHC 137
                  +G G G  ++  S  GA PP          +G     AG   PPR+       
Sbjct: 66  AYQDARCFGRGEGGDLQVSSGPGAAPPAEFRASARSAQGSRDVPAGPGFPPRLPRPFTSA 125

Query: 138 PTRHLSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSP---AAPGLQECPRTGPSQPSMQ 194
              + ++ R   R+  ++LP P     CPQ+     S      PG    PR      +  
Sbjct: 126 SFSNQTRLR---RRSASALPAPR---LCPQRASPGCSSPGVRGPGGGASPRARGGNAAAA 179

Query: 195 LPSYPEEGSGLSRGHKDARPGPPGQEREQVLRACAPQPQHQVDCSAVGG---PVAAGEKP 251
           L +    G G SR    A        R+  L ACA  P+      A  G    + AGE+P
Sbjct: 180 LAARQAAGGGRSRSAFVA-------GRDAAL-ACAQLPRRPRGAGARRGMRRRLGAGERP 231


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.137    0.465 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,911,237
Number of Sequences: 37866
Number of extensions: 1268782
Number of successful extensions: 6171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 562
Number of HSP's that attempted gapping in prelim test: 5244
Number of HSP's gapped (non-prelim): 1318
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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