Guide to the Human Genome
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Name: ARHGAP9 Sequence: fasta or formatted (640aa) NCBI GI: 122939151
Description:

Rho GTPase activating protein 9 isoform 2

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [731aa] Rho GTPase activating protein 9 isoform 1
alt prot [547aa] Rho GTPase activating protein 9 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         37           2
 C cysteine            1.6         10           1
 D aspartate           4.5         29           2
 E glutamate           6.6         42           4
 F phenylalanine       2.3         15           1
 G glycine             7.5         48           2
 H histidine           1.7         11           1
 I isoleucine          2.3         15           1
 K lysine              3.0         19           1
 L leucine            13.8         88           3
 M methionine          0.9          6           1
 N asparagine          2.5         16           2
 P proline            10.5         67           3
 Q glutamine           5.2         33           2
 R arginine            9.4         60           2
 S serine             10.5         67           2
 T threonine           4.2         27           2
 V valine              4.5         29           2
 W tryptophan          2.0         13           2
 Y tyrosine            1.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 9 isoform 2 
ARHGAP9               0.998   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.707   Rho GTPase activating protein 9 isoform 3 
ARHGAP15              0.180   ARHGAP15 
ARHGAP12              0.167   Rho GTPase activating protein 12 
ARHGAP27              0.165   Rho GTPase activating protein 27 isoform a 
ARHGAP27              0.164   Rho GTPase activating protein 27 isoform b 
SNX26                 0.047   sorting nexin 26 
ARHGAP23              0.043   Rho GTPase activating protein 23 
RICS                  0.042   Rho GTPase-activating protein isoform 1 
RICS                  0.038   Rho GTPase-activating protein isoform 2 
ARHGAP30              0.034   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.034   Rho GTPase activating protein 30 isoform 1 
CHN1                  0.032   chimerin (chimaerin) 1 isoform a 
CHN1                  0.032   chimerin (chimaerin) 1 isoform b 
SYDE1                 0.031   synapse defective 1, Rho GTPase, homolog 1 
ABR                   0.031   active breakpoint cluster region-related  protein i...
ABR                   0.031   active breakpoint cluster region-related  protein is...
ABR                   0.031   active breakpoint cluster region-related  protein is...
SYDE2                 0.031   synapse defective 1, Rho GTPase, homolog 2 
ARHGAP21              0.029   Rho GTPase activating protein 21 
CHN2                  0.029   beta chimerin isoform 2 
CHN2                  0.029   beta chimerin isoform 1 
BCR                   0.028   breakpoint cluster region isoform 1 
BCR                   0.028   breakpoint cluster region isoform 2 
LOC553158             0.026   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.026   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.026   Rho GTPase activating protein 8 isoform 1 
RALBP1                0.025   ralA binding protein 1 
CDGAP                 0.025   Cdc42 GTPase-activating protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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