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Search of human proteins with 169171347
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
(1128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 2347 0.0
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 1582 0.0
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 1582 0.0
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 1582 0.0
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 57 1e-07
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 55 4e-07
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 55 4e-07
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 54 6e-07
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 54 6e-07
gi|57864582 hornerin [Homo sapiens] 53 1e-06
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 53 2e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 53 2e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 53 2e-06
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 52 3e-06
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 52 3e-06
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 52 3e-06
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 52 3e-06
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 51 7e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 50 9e-06
gi|48762934 alpha 2 type I collagen [Homo sapiens] 50 1e-05
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-05
gi|11386161 alpha 2 type IX collagen [Homo sapiens] 49 2e-05
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 49 3e-05
gi|109452587 family with sequence similarity 98, member B isofor... 49 3e-05
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 48 5e-05
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 48 6e-05
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 47 8e-05
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 47 8e-05
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-04
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 46 2e-04
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 2347 bits (6083), Expect = 0.0
Identities = 1128/1128 (100%), Positives = 1128/1128 (100%)
Query: 1 MVDHMGWVCTDNESSLGLSASKFIILSDSAGPNPLTQKTESNPVVWALPHDPRGWRLRPL 60
MVDHMGWVCTDNESSLGLSASKFIILSDSAGPNPLTQKTESNPVVWALPHDPRGWRLRPL
Sbjct: 1 MVDHMGWVCTDNESSLGLSASKFIILSDSAGPNPLTQKTESNPVVWALPHDPRGWRLRPL 60
Query: 61 QTAASLPFFPASHSLSLSQGVATVCYKFYLSSVQERREEALSQLRACLSPRTPIKGTNWT 120
QTAASLPFFPASHSLSLSQGVATVCYKFYLSSVQERREEALSQLRACLSPRTPIKGTNWT
Sbjct: 61 QTAASLPFFPASHSLSLSQGVATVCYKFYLSSVQERREEALSQLRACLSPRTPIKGTNWT 120
Query: 121 AIHQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQ 180
AIHQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQ
Sbjct: 121 AIHQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQ 180
Query: 181 SPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSL 240
SPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSL
Sbjct: 181 SPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSL 240
Query: 241 FLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQ 300
FLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQ
Sbjct: 241 FLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQ 300
Query: 301 DDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIH 360
DDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIH
Sbjct: 301 DDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIH 360
Query: 361 KPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGG 420
KPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGG
Sbjct: 361 KPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGG 420
Query: 421 GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPG 480
GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPG
Sbjct: 421 GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPG 480
Query: 481 VERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWE 540
VERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWE
Sbjct: 481 VERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWE 540
Query: 541 GVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLG 600
GVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLG
Sbjct: 541 GVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLG 600
Query: 601 VSLPPFGLPTSASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCS 660
VSLPPFGLPTSASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCS
Sbjct: 601 VSLPPFGLPTSASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCS 660
Query: 661 TRAAQVGRNFTVLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKH 720
TRAAQVGRNFTVLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKH
Sbjct: 661 TRAAQVGRNFTVLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKH 720
Query: 721 WVLGVSFESPKSRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPL 780
WVLGVSFESPKSRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPL
Sbjct: 721 WVLGVSFESPKSRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPL 780
Query: 781 GERKWINRNVCHSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPAL 840
GERKWINRNVCHSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPAL
Sbjct: 781 GERKWINRNVCHSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPAL 840
Query: 841 QSLPRGSGTCLQKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGS 900
QSLPRGSGTCLQKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGS
Sbjct: 841 QSLPRGSGTCLQKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGS 900
Query: 901 CVTVAGTVEHFLLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGR 960
CVTVAGTVEHFLLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGR
Sbjct: 901 CVTVAGTVEHFLLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGR 960
Query: 961 MRPLSPRAVSDAREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSF 1020
MRPLSPRAVSDAREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSF
Sbjct: 961 MRPLSPRAVSDAREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSF 1020
Query: 1021 RGCCLEPLEGPFPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRK 1080
RGCCLEPLEGPFPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRK
Sbjct: 1021 RGCCLEPLEGPFPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRK 1080
Query: 1081 SRRVPASLLARIPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 1128
SRRVPASLLARIPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG
Sbjct: 1081 SRRVPASLLARIPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 1128
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 1582 bits (4096), Expect = 0.0
Identities = 757/757 (100%), Positives = 757/757 (100%)
Query: 372 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 431
GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE
Sbjct: 45 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 104
Query: 432 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ 491
EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ
Sbjct: 105 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ 164
Query: 492 FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM 551
FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM
Sbjct: 165 FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM 224
Query: 552 AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS 611
AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS
Sbjct: 225 AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS 284
Query: 612 ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT 671
ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT
Sbjct: 285 ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT 344
Query: 672 VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK 731
VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK
Sbjct: 345 VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK 404
Query: 732 SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC 791
SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC
Sbjct: 405 SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC 464
Query: 792 HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL 851
HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL
Sbjct: 465 HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL 524
Query: 852 QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF 911
QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF
Sbjct: 525 QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF 584
Query: 912 LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD 971
LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD
Sbjct: 585 LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD 644
Query: 972 AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP 1031
AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP
Sbjct: 645 AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP 704
Query: 1032 FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR 1091
FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR
Sbjct: 705 FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR 764
Query: 1092 IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 1128
IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG
Sbjct: 765 IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 801
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 1582 bits (4096), Expect = 0.0
Identities = 757/757 (100%), Positives = 757/757 (100%)
Query: 372 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 431
GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE
Sbjct: 45 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 104
Query: 432 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ 491
EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ
Sbjct: 105 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ 164
Query: 492 FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM 551
FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM
Sbjct: 165 FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM 224
Query: 552 AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS 611
AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS
Sbjct: 225 AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS 284
Query: 612 ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT 671
ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT
Sbjct: 285 ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT 344
Query: 672 VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK 731
VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK
Sbjct: 345 VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK 404
Query: 732 SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC 791
SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC
Sbjct: 405 SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC 464
Query: 792 HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL 851
HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL
Sbjct: 465 HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL 524
Query: 852 QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF 911
QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF
Sbjct: 525 QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF 584
Query: 912 LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD 971
LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD
Sbjct: 585 LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD 644
Query: 972 AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP 1031
AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP
Sbjct: 645 AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP 704
Query: 1032 FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR 1091
FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR
Sbjct: 705 FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR 764
Query: 1092 IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 1128
IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG
Sbjct: 765 IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 801
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 1582 bits (4096), Expect = 0.0
Identities = 757/757 (100%), Positives = 757/757 (100%)
Query: 372 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 431
GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE
Sbjct: 45 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 104
Query: 432 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ 491
EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ
Sbjct: 105 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ 164
Query: 492 FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM 551
FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM
Sbjct: 165 FGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRM 224
Query: 552 AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS 611
AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS
Sbjct: 225 AHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPPFGLPTS 284
Query: 612 ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT 671
ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT
Sbjct: 285 ASEPDPAQRVQSTGVYRHRHTNAIEVGLPGSDKVIWTSDRRANWSEGCSTRAAQVGRNFT 344
Query: 672 VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK 731
VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK
Sbjct: 345 VLYGLLASAPPCLLHPASHKLPGSAFDLALAWGKCLPRAIEAFPEQLKHWVLGVSFESPK 404
Query: 732 SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC 791
SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC
Sbjct: 405 SRTCIRPLSTPHSRHCCHPQSRQCQNTVGDPRQNADSRESCSVPLVTPLGERKWINRNVC 464
Query: 792 HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL 851
HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL
Sbjct: 465 HSEDERKPAANGSAVMRQMALSFPQPGFILRWLFVQEVAFPFAWTSPALQSLPRGSGTCL 524
Query: 852 QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF 911
QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF
Sbjct: 525 QKWMAFEVEESEVAENALKQQSKTMFINLAWGRRQRDPEVESAEKVGGSCVTVAGTVEHF 584
Query: 912 LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD 971
LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD
Sbjct: 585 LLQTGGNCGFWNSDFEECPLLSTLLEWRASPLPWGTISTLFHPCTWVGRMRPLSPRAVSD 644
Query: 972 AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP 1031
AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP
Sbjct: 645 AREPGEVGIRGARHEGRVAHREGPQGAATWRDCAIPAQKPGGESVRVSFRGCCLEPLEGP 704
Query: 1032 FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR 1091
FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR
Sbjct: 705 FPSWELVGRLVLSPRPLSAPSAPRRLGDKAQLPNCCLGAPPTADRQRRKSRRVPASLLAR 764
Query: 1092 IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 1128
IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG
Sbjct: 765 IPRLCPEQRPQSPIPRGQPVPPGPMRPLSELDPKRDG 801
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 56.6 bits (135), Expect = 1e-07
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 42/264 (15%)
Query: 336 TQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGA--RLAESRGRGVTPR 393
TQ + G +G + + SS+ Q A S G+ ++S G
Sbjct: 68 TQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQS 127
Query: 394 ASWSRQPA-GGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGR 452
S+S+QP+ GG S G Q+ + G++ + +GGGG GGG G
Sbjct: 128 GSYSQQPSYGGQQQSYG------QQQSYNPPQGYGQQNQYNSSSGGGG-----GGGGGGN 176
Query: 453 QPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAA 512
+++++ G+G G G Q G G G+ +G + R
Sbjct: 177 YGQDQSSMSSGGGSGG-GYGNQDQSGGG-------GSGGYGQQ-------------DRGG 215
Query: 513 EGRGG-GGGGGCGAQAHRRVVGQGQVRWEGVGQAARG------RRMAHHCSQGRNSQSRH 565
GRGG GGGGG G + R G + R G G+ RG R + R+ SRH
Sbjct: 216 RGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRH 275
Query: 566 QPGRDRPHHHHLELESLRERVPCE 589
+D ++ + ++ L E V E
Sbjct: 276 DSEQDNSDNNTIFVQGLGENVTIE 299
Score = 30.4 bits (67), Expect = 9.9
Identities = 37/125 (29%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 417 RDGGGLAEHRGREGEEGVRAGGGGTG--EVRGGGSPGRQPVG------------RAAVTG 462
R G G GR G G +GGGG G GGG G+Q G +
Sbjct: 383 RGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRN 442
Query: 463 EAGAGAAGRGAQSVRGPGVERRVAE-GAQQFGPRVGLRQHAERVERAQRAA--EGRGGGG 519
E A + GPG G + G R G + R R GRGGG
Sbjct: 443 ECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGD 502
Query: 520 GGGCG 524
GG G
Sbjct: 503 RGGFG 507
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 55.1 bits (131), Expect = 4e-07
Identities = 64/208 (30%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 367 SLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHR 426
S+A +GA+ GA L + GV A AGGPL+ +R G
Sbjct: 801 SVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVG 860
Query: 427 GR----EGEEGVRAGGGGT----GEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRG 478
R G +G AGGGG G G R P + A A AA +G ++ +G
Sbjct: 861 ARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQG 920
Query: 479 PGVERRVAEGAQQFGPRVGLRQHAERVERA---------QRAAEGRGGGGGGGCGAQ-AH 528
R A+GA R G R R A RAA GR GGG GA+ AH
Sbjct: 921 -RAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGGQAVGARAAH 979
Query: 529 RRVVGQGQV------RWEGVGQAARGRR 550
+ + GQV G RGRR
Sbjct: 980 QARLAGGQVDQVVVAARAGDADGVRGRR 1007
Score = 41.2 bits (95), Expect = 0.006
Identities = 65/217 (29%), Positives = 80/217 (36%), Gaps = 45/217 (20%)
Query: 386 RGRGVTPRASWS--------RQPAGGPLSS-----EGHLLPLVQRDGGGLAEHRGREGEE 432
RG+GV P A S R PA G + GH+ V+ RGR +
Sbjct: 738 RGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGHVP--VELTAAAAVSGRGRLRD- 794
Query: 433 GVRAGGGGTGEVRGGGSPGRQPVGRAAVT---GEAGAGAAGRGAQSVRGPGVERRVAEGA 489
G G V + G Q AV EAG RG + G + V +
Sbjct: 795 -------GLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRM 847
Query: 490 QQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGR 549
+Q R G R RV AA GR G G GG G R V G V Q A R
Sbjct: 848 RQRRVRAGRR----RVGARAVAAAGRQGAGAGGGG-----RRVRHGHGHGAAVLQRAPCR 898
Query: 550 RMAH-------HCSQG-RNSQSR-HQPG-RDRPHHHH 576
+ H +QG R +Q R H+PG + P H H
Sbjct: 899 QQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRH 935
Score = 34.7 bits (78), Expect = 0.52
Identities = 106/395 (26%), Positives = 132/395 (33%), Gaps = 75/395 (18%)
Query: 208 GQTQARGYEPRTGRDGDPG---TNWDVLQSASGGSLFLGLPSPGHT-RPLP--ARGRREP 261
G+ + R R R PG + DVL A G L G +PL ARG P
Sbjct: 373 GRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRP 432
Query: 262 EAGESEARPESPPQPQPRRRLARRG-PSASPGSWGE-SHPQDDFQYEDNSDQDDPNQGAF 319
A EA + +P RR RG A P G + P + + QD P+ GA
Sbjct: 433 AALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRGLRLQTLLLQDAPHGGAH 492
Query: 320 LPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEE-R 378
+ V+ ++GV G + QG E R
Sbjct: 493 --------------EHVLVAVPATGVGGLVGAGQGAVAAAGNAPERLPAGVQGCGEEVGR 538
Query: 379 GAR-----------------LAESRGRGVTPRASWSRQPA--GGPLSSEGHLL------- 412
GAR LA G A + P GG L L+
Sbjct: 539 GARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRE 598
Query: 413 -PLVQRDGGGLAEHRGREGEEGVRAGGGGTG--EVRG----GGSPGRQPVGRAAVTGEAG 465
P +R G R R G G GGGG G ++ G GG+ G V AA A
Sbjct: 599 CPARRRGGCWPRRPRRRHGGGG---GGGGPGLQDLLGGGHAGGAHGHVVVAPAAAAPTAR 655
Query: 466 AGAAGR-GAQSVRGPGVERRVAEGAQ---QFGPRVGLRQHAERVERAQRAAEGRGGGGGG 521
G AGR G +V P V GA VG+ H R A RA R GG
Sbjct: 656 EGRAGRHGHVAVVCPQVAAGAPVGADLDVSVVLWVGVVGHLGRGRGAGRAEAARAAREGG 715
Query: 522 ---------GCGAQAHRRVVGQGQVRWEGVGQAAR 547
G G HR + G R +GVG A+
Sbjct: 716 PHQGVFIQRGRGGLGHRPLPGW---RGQGVGPLAQ 747
Score = 34.3 bits (77), Expect = 0.69
Identities = 85/361 (23%), Positives = 121/361 (33%), Gaps = 55/361 (15%)
Query: 248 GHTRPLPARGRREPEAGESEA-------RPESPPQPQPRRRLA--------------RRG 286
G + L A G R P++G SE RP PP + + L G
Sbjct: 46 GASARLSASGSRSPKSGSSETQEAPSAPRPSFPPDAKAKGLLTFHDGGLLQVVGQEVNAG 105
Query: 287 PSASPGSWGESHPQDDFQ--YEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSG 344
G + P + +S + P P L +++ + ++ ++ G
Sbjct: 106 VGVGRGQGTGTRPPAPAAGAADAHSADETPEASGPAPGALVSRLRKRRRRRLRLG-WQPG 164
Query: 345 VSGQLHGDHYYTF-------NIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWS 397
+ + GD T + H S+ +Q A RG R A RG + SW
Sbjct: 165 LLPHVDGDVVETILEAGRGLSAHGRSTAPRTTDQ-APGLTRGPRPALRCQRGRRLQLSWG 223
Query: 398 RQPAGGPLSSEGH--LLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPV 455
P ++ H L +RD H GR GV G G G R GG G V
Sbjct: 224 GGRLVAPSRADTHAALAAFPERD----IFHGGRVVALGVVGEGRGHGGDRRGGGEGLGTV 279
Query: 456 GRAA----VTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRA 511
AA + GA RG ++ R + AQ R R R
Sbjct: 280 AAAAPLRVCADDLGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRD 339
Query: 512 AEGRGGGGGGGCGAQAHRRVV----GQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQP 567
RGGG ++H VV G+ G + RGRR QGR + + P
Sbjct: 340 RLRRGGG-----HTKSHLGVVTIVPGRRGRAAGGQERGGRGRRR----QQGRRGRRQAGP 390
Query: 568 G 568
G
Sbjct: 391 G 391
Score = 31.2 bits (69), Expect = 5.8
Identities = 46/141 (32%), Positives = 56/141 (39%), Gaps = 29/141 (20%)
Query: 434 VRAGGGGT---GEVRGGGSPGRQPVGRAAVTGEAGAGAAGR--GAQSVRGPGVERRVAEG 488
V AG G G+ RG P AA+ EA AA R G + R G+ EG
Sbjct: 413 VHAGQAGQPLQGQARGPHRP-------AALAQEALRAAAARPHGRRHYRVRGLRGAGPEG 465
Query: 489 AQQF-GPRVGLRQHAERVERAQRA-----------AEGRGGGGGGGCGA-----QAHRRV 531
A + GP GLR ++ A A G GG G G GA A R+
Sbjct: 466 AGRLAGPWRGLRLQTLLLQDAPHGGAHEHVLVAVPATGVGGLVGAGQGAVAAAGNAPERL 525
Query: 532 VGQGQVRWEGVGQAARGRRMA 552
Q E VG+ ARG R+A
Sbjct: 526 PAGVQGCGEEVGRGARGDRVA 546
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 55.1 bits (131), Expect = 4e-07
Identities = 64/208 (30%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 367 SLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHR 426
S+A +GA+ GA L + GV A AGGPL+ +R G
Sbjct: 801 SVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVG 860
Query: 427 GR----EGEEGVRAGGGGT----GEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRG 478
R G +G AGGGG G G R P + A A AA +G ++ +G
Sbjct: 861 ARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQG 920
Query: 479 PGVERRVAEGAQQFGPRVGLRQHAERVERA---------QRAAEGRGGGGGGGCGAQ-AH 528
R A+GA R G R R A RAA GR GGG GA+ AH
Sbjct: 921 -RAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGGQAVGARAAH 979
Query: 529 RRVVGQGQV------RWEGVGQAARGRR 550
+ + GQV G RGRR
Sbjct: 980 QARLAGGQVDQVVVAARAGDADGVRGRR 1007
Score = 41.2 bits (95), Expect = 0.006
Identities = 65/217 (29%), Positives = 80/217 (36%), Gaps = 45/217 (20%)
Query: 386 RGRGVTPRASWS--------RQPAGGPLSS-----EGHLLPLVQRDGGGLAEHRGREGEE 432
RG+GV P A S R PA G + GH+ V+ RGR +
Sbjct: 738 RGQGVGPLAQPSVQVLGRVPRDPAVGAATVAQGPVHGHVP--VELTAAAAVSGRGRLRD- 794
Query: 433 GVRAGGGGTGEVRGGGSPGRQPVGRAAVT---GEAGAGAAGRGAQSVRGPGVERRVAEGA 489
G G V + G Q AV EAG RG + G + V +
Sbjct: 795 -------GLGRVASVAAEGAQVAWAGAVLVQGHEAGVAGGARGGGAAAGGPLAGAVVQRM 847
Query: 490 QQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGR 549
+Q R G R RV AA GR G G GG G R V G V Q A R
Sbjct: 848 RQRRVRAGRR----RVGARAVAAAGRQGAGAGGGG-----RRVRHGHGHGAAVLQRAPCR 898
Query: 550 RMAH-------HCSQG-RNSQSR-HQPG-RDRPHHHH 576
+ H +QG R +Q R H+PG + P H H
Sbjct: 899 QQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRH 935
Score = 34.7 bits (78), Expect = 0.52
Identities = 106/395 (26%), Positives = 132/395 (33%), Gaps = 75/395 (18%)
Query: 208 GQTQARGYEPRTGRDGDPG---TNWDVLQSASGGSLFLGLPSPGHT-RPLP--ARGRREP 261
G+ + R R R PG + DVL A G L G +PL ARG P
Sbjct: 373 GRGRRRQQGRRGRRQAGPGLAKVDVDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRP 432
Query: 262 EAGESEARPESPPQPQPRRRLARRG-PSASPGSWGE-SHPQDDFQYEDNSDQDDPNQGAF 319
A EA + +P RR RG A P G + P + + QD P+ GA
Sbjct: 433 AALAQEALRAAAARPHGRRHYRVRGLRGAGPEGAGRLAGPWRGLRLQTLLLQDAPHGGAH 492
Query: 320 LPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEE-R 378
+ V+ ++GV G + QG E R
Sbjct: 493 --------------EHVLVAVPATGVGGLVGAGQGAVAAAGNAPERLPAGVQGCGEEVGR 538
Query: 379 GAR-----------------LAESRGRGVTPRASWSRQPA--GGPLSSEGHLL------- 412
GAR LA G A + P GG L L+
Sbjct: 539 GARGDRVAGGHVEVVPVGQQLAICMLHGQLGTAPHAHVPTVLGGALGGRAGLVAAPARRE 598
Query: 413 -PLVQRDGGGLAEHRGREGEEGVRAGGGGTG--EVRG----GGSPGRQPVGRAAVTGEAG 465
P +R G R R G G GGGG G ++ G GG+ G V AA A
Sbjct: 599 CPARRRGGCWPRRPRRRHGGGG---GGGGPGLQDLLGGGHAGGAHGHVVVAPAAAAPTAR 655
Query: 466 AGAAGR-GAQSVRGPGVERRVAEGAQ---QFGPRVGLRQHAERVERAQRAAEGRGGGGGG 521
G AGR G +V P V GA VG+ H R A RA R GG
Sbjct: 656 EGRAGRHGHVAVVCPQVAAGAPVGADLDVSVVLWVGVVGHLGRGRGAGRAEAARAAREGG 715
Query: 522 ---------GCGAQAHRRVVGQGQVRWEGVGQAAR 547
G G HR + G R +GVG A+
Sbjct: 716 PHQGVFIQRGRGGLGHRPLPGW---RGQGVGPLAQ 747
Score = 34.3 bits (77), Expect = 0.69
Identities = 85/361 (23%), Positives = 121/361 (33%), Gaps = 55/361 (15%)
Query: 248 GHTRPLPARGRREPEAGESEA-------RPESPPQPQPRRRLA--------------RRG 286
G + L A G R P++G SE RP PP + + L G
Sbjct: 46 GASARLSASGSRSPKSGSSETQEAPSAPRPSFPPDAKAKGLLTFHDGGLLQVVGQEVNAG 105
Query: 287 PSASPGSWGESHPQDDFQ--YEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSG 344
G + P + +S + P P L +++ + ++ ++ G
Sbjct: 106 VGVGRGQGTGTRPPAPAAGAADAHSADETPEASGPAPGALVSRLRKRRRRRLRLG-WQPG 164
Query: 345 VSGQLHGDHYYTF-------NIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWS 397
+ + GD T + H S+ +Q A RG R A RG + SW
Sbjct: 165 LLPHVDGDVVETILEAGRGLSAHGRSTAPRTTDQ-APGLTRGPRPALRCQRGRRLQLSWG 223
Query: 398 RQPAGGPLSSEGH--LLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPV 455
P ++ H L +RD H GR GV G G G R GG G V
Sbjct: 224 GGRLVAPSRADTHAALAAFPERD----IFHGGRVVALGVVGEGRGHGGDRRGGGEGLGTV 279
Query: 456 GRAA----VTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRA 511
AA + GA RG ++ R + AQ R R R
Sbjct: 280 AAAAPLRVCADDLGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRD 339
Query: 512 AEGRGGGGGGGCGAQAHRRVV----GQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQP 567
RGGG ++H VV G+ G + RGRR QGR + + P
Sbjct: 340 RLRRGGG-----HTKSHLGVVTIVPGRRGRAAGGQERGGRGRRR----QQGRRGRRQAGP 390
Query: 568 G 568
G
Sbjct: 391 G 391
Score = 31.2 bits (69), Expect = 5.8
Identities = 46/141 (32%), Positives = 56/141 (39%), Gaps = 29/141 (20%)
Query: 434 VRAGGGGT---GEVRGGGSPGRQPVGRAAVTGEAGAGAAGR--GAQSVRGPGVERRVAEG 488
V AG G G+ RG P AA+ EA AA R G + R G+ EG
Sbjct: 413 VHAGQAGQPLQGQARGPHRP-------AALAQEALRAAAARPHGRRHYRVRGLRGAGPEG 465
Query: 489 AQQF-GPRVGLRQHAERVERAQRA-----------AEGRGGGGGGGCGA-----QAHRRV 531
A + GP GLR ++ A A G GG G G GA A R+
Sbjct: 466 AGRLAGPWRGLRLQTLLLQDAPHGGAHEHVLVAVPATGVGGLVGAGQGAVAAAGNAPERL 525
Query: 532 VGQGQVRWEGVGQAARGRRMA 552
Q E VG+ ARG R+A
Sbjct: 526 PAGVQGCGEEVGRGARGDRVA 546
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 54.3 bits (129), Expect = 6e-07
Identities = 111/401 (27%), Positives = 138/401 (34%), Gaps = 79/401 (19%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFR 197
GPEG P +G R +G + G A G +G P ++ A E
Sbjct: 774 GPEGA-------PGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGE 826
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSP----GHTRPL 253
P G A G G G+ G D A G G P P G T P
Sbjct: 827 TGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA--GAPGPQGPSGAPGPQGPTGVTGPK 884
Query: 254 PARGRREPEAGE-------------SEARPESPPQPQPRRR---LARRGPSASPGSWGES 297
ARG + P S P P P P + RG S PG GE
Sbjct: 885 GARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEP 944
Query: 298 HPQDDF--QYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYY 355
Q E DD GA P P Q Q+ V G+ GQ G+ +
Sbjct: 945 GLQGPAGPPGEKGEPGDDGPSGAEGP----PGPQGLAGQRGIV-----GLPGQ-RGERGF 994
Query: 356 TFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLV 415
+ PS QGA P AS R P G P+ G P
Sbjct: 995 P-GLPGPSGEPG--KQGA------------------PGASGDRGPPG-PVGPPGLTGPAG 1032
Query: 416 Q--RDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPG-------RQPVGRAAVTGEAG 465
+ R+G G GR+G GV+ G TG V G+PG P G+ GEAG
Sbjct: 1033 EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAG 1092
Query: 466 A----GAAG-RGAQSVRGPGVERRVAEGAQQFGPRVGLRQH 501
A G +G GA+ ++GP R A + G R GL+ H
Sbjct: 1093 AQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER-GLKGH 1132
Score = 53.5 bits (127), Expect = 1e-06
Identities = 107/415 (25%), Positives = 141/415 (33%), Gaps = 74/415 (17%)
Query: 137 SGPEGREATR--ARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNE 194
+GP+G R + P G G+ + G A GL GRP P+ A E
Sbjct: 524 AGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGE 583
Query: 195 AFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLP 254
R PQ GQ G+ G +G+PG + + G GL PG
Sbjct: 584 DGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGE--KGLPGAPGLRGL--PGKDGETG 639
Query: 255 ARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDP 314
A G P E + P P + L GP PG G+ DQ P
Sbjct: 640 AAGPPGPAGPAGERGEQGAPGPSGFQGLP--GPPGPPGEGGKP-----------GDQGVP 686
Query: 315 NQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGAR 374
+ A P ++ P+ + F P S QG +
Sbjct: 687 GE-AGAPGLVGPRGERGF-----------------------------PGERGSPGAQGLQ 716
Query: 375 SEERGARLAESRGRGVTPRASWSRQPAG--GPLSSEGHLLPLVQRDGGGLAEHRGREGEE 432
RG L + G AS P G GP +G +P +R G+A +G G+
Sbjct: 717 G-PRG--LPGTPGTDGPKGASGPAGPPGAQGPPGLQG--MP-GERGAAGIAGPKGDRGDV 770
Query: 433 GVRAGGGGTGEVRGGGSPGR-QPVGRAAVTGEAG-------AGAAG-RGAQSVRGPGVER 483
G + G G+ G G G P G A GE G AG+AG RGA RG E
Sbjct: 771 GEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERG---ET 827
Query: 484 RVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGG-----GGGGGCGAQAHRRVVG 533
A GP Q + E+ + +G G G G G Q V G
Sbjct: 828 GPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTG 882
Score = 43.9 bits (102), Expect = 9e-04
Identities = 94/362 (25%), Positives = 118/362 (32%), Gaps = 73/362 (20%)
Query: 144 ATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRP 203
AT + P P G++ G + +G +G P Q P Q P
Sbjct: 94 ATASGQPGPKGQKGEPGDIKD-----IVGPKGPPGPQGPAGE---------------QGP 133
Query: 204 QRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARGRREPEA 263
+ G +G GRDG+PGT + G G P G G + +A
Sbjct: 134 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPP--GPPGLGGNFAAQMAGGFDEKA 191
Query: 264 GESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAV 323
G ++ P + GP PG G PQ FQ + +P + P V
Sbjct: 192 GGAQLGVMQGP-------MGPMGPRGPPGPAGAPGPQG-FQ----GNPGEPGE----PGV 235
Query: 324 LHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLA 383
P G G+ GD K QGAR L
Sbjct: 236 SGPMGPRG----------PPGPPGK-PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLP 284
Query: 384 ESRGRGVTPRASWSRQPAGGP--------LSSEGHLLPLVQRDGGGLAEHRGREGEEGVR 435
+G P ++ AG P G P+ R GL RGR G G
Sbjct: 285 GVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPR---GLPGERGRTGPAGAA 341
Query: 436 AGGGGTGEVRGGGSPGRQPVGRAAVTGEAGA-GAAGR-GAQSVRGPGVERRVAEGAQQFG 493
G G+ G PG PVG A G GA GA G G RGP EGAQ G
Sbjct: 342 GARGNDGQPGPAGPPG--PVGPAGGPGFPGAPGAKGEAGPTGARGP-------EGAQ--G 390
Query: 494 PR 495
PR
Sbjct: 391 PR 392
Score = 43.1 bits (100), Expect = 0.001
Identities = 52/184 (28%), Positives = 67/184 (36%), Gaps = 25/184 (13%)
Query: 137 SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRP---SLQSPEATSNLCRARN 193
+G GRE + P G+ +G RG A+G G P P + R
Sbjct: 1031 AGEPGREGSPGA-DGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRG 1089
Query: 194 EAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDV----LQSASGGSLFLGLPSP-- 247
EA Q P P G ARG + G GD G + L+ G + GLP P
Sbjct: 1090 EA---GAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1146
Query: 248 -----GHTRPLPARGRREP-----EAGESEAR--PESPPQPQPRRRLARRGPSASPGSWG 295
G + P G R P +G+ A P P PR R GP+ PG+ G
Sbjct: 1147 PSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPG 1206
Query: 296 ESHP 299
P
Sbjct: 1207 PPGP 1210
Score = 36.6 bits (83), Expect = 0.14
Identities = 120/525 (22%), Positives = 166/525 (31%), Gaps = 81/525 (15%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFR 197
GP G T P +G + SG G+ GL+G P + + + +
Sbjct: 717 GPRGLPGT----PGTDGPKGASGPAGPPGAQGPPGLQGMPG---ERGAAGIAGPKGDRGD 769
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARG 257
+ + P+ G+ RG TG G PG A+G +G P P + A
Sbjct: 770 VGEKGPEGAPGKDGGRGL---TGPIGPPGP-----AGANGEKGEVGPPGPAGS----AGA 817
Query: 258 RREP-EAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQ 316
R P E GE+ PP P GP + G G Q + + ++ P
Sbjct: 818 RGAPGERGET-----GPPGPA-----GFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 867
Query: 317 GAFLPAVLHPQVQT--QFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQG-- 372
+ P P T + + Q ++G G + P S+ + G
Sbjct: 868 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG-------RVGPPGSNGNPGPPGPP 920
Query: 373 ---ARSEERGARLAESR-GRGVTPRASWSRQPAG--------GPLSSEGHLLPLVQRDGG 420
+ +GAR GR P P G GP +EG P
Sbjct: 921 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 980
Query: 421 GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQ-------PVGRAAVTGEAGA------- 466
G+ G+ GE G G +GE G+PG PVG +TG AG
Sbjct: 981 GIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSP 1040
Query: 467 ---GAAGR-GAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGG--GGG 520
G GR GA V+G E GP ++ R G G G
Sbjct: 1041 GADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPS 1100
Query: 521 GGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELE 580
G GA+ + G + E RG + H G PG P
Sbjct: 1101 GPAGARGIQGPQGPRGDKGEAGEPGERGLK-GHRGFTGLQG----LPGPPGPSGDQGASG 1155
Query: 581 SLRERVPCEPPPPLPPLLLGVSLPPFGLPTSASEPDPAQRVQSTG 625
P PP P+ P G+P P P R TG
Sbjct: 1156 PAGPSGPRGPPGPVGP---SGKDGANGIPGPIGPPGPRGRSGETG 1197
Score = 36.2 bits (82), Expect = 0.18
Identities = 102/411 (24%), Positives = 135/411 (32%), Gaps = 68/411 (16%)
Query: 110 PRTP----IKG-TNWTAIHQSRSREGASHGKG-SGPEGREATRARFPSPNGKRRGSGKLW 163
P TP +KG + + ++ GA KG SG G + P P G R G+
Sbjct: 278 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGS----PGPMGPRGLPGERG 333
Query: 164 KRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDG 223
+ G A G G P + G T ARG E G G
Sbjct: 334 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRG 393
Query: 224 DPGTNWDV-LQSASGGSLFLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQ-PRRR 281
+PGT ASG G+P + P G P PP PQ
Sbjct: 394 EPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG-----PRGPPGPQGATGP 448
Query: 282 LARRGPSASPGSWGESHPQDDFQYEDNSDQDDPN----QGAFLPAVLHPQVQTQFDQKTQ 337
L +G + PG G Q + +P QGA PA ++ +
Sbjct: 449 LGPKGQTGEPGIAGFKGEQ--------GPKGEPGPAGPQGAPGPA---------GEEGKR 491
Query: 338 VSALSSGVSGQL--HGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRG-------- 387
+ G G + G+ N P +GA E + LA +G
Sbjct: 492 GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRP 551
Query: 388 --------RGVTPRASWSRQ-----PAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGV 434
RG+T R + P+G P +G P + G G G +G
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGAP-GEDGRPGPPGPQGARGQPGVMGFPGPKGA 610
Query: 435 RAGGGGTGEVRGGGSPG-RQPVGRAAVTGEAG----AGAAG-RGAQSVRGP 479
G GE G+PG R G+ TG AG AG AG RG Q GP
Sbjct: 611 NGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGP 661
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 54.3 bits (129), Expect = 6e-07
Identities = 111/401 (27%), Positives = 138/401 (34%), Gaps = 79/401 (19%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFR 197
GPEG P +G R +G + G A G +G P ++ A E
Sbjct: 705 GPEGA-------PGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGE 757
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSP----GHTRPL 253
P G A G G G+ G D A G G P P G T P
Sbjct: 758 TGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA--GAPGPQGPSGAPGPQGPTGVTGPK 815
Query: 254 PARGRREPEAGE-------------SEARPESPPQPQPRRR---LARRGPSASPGSWGES 297
ARG + P S P P P P + RG S PG GE
Sbjct: 816 GARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEP 875
Query: 298 HPQDDF--QYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYY 355
Q E DD GA P P Q Q+ V G+ GQ G+ +
Sbjct: 876 GLQGPAGPPGEKGEPGDDGPSGAEGP----PGPQGLAGQRGIV-----GLPGQ-RGERGF 925
Query: 356 TFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLV 415
+ PS QGA P AS R P G P+ G P
Sbjct: 926 P-GLPGPSGEPG--KQGA------------------PGASGDRGPPG-PVGPPGLTGPAG 963
Query: 416 Q--RDGG-GLAEHRGREGEEGVRAGGGGTGEVRGGGSPG-------RQPVGRAAVTGEAG 465
+ R+G G GR+G GV+ G TG V G+PG P G+ GEAG
Sbjct: 964 EPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAG 1023
Query: 466 A----GAAG-RGAQSVRGPGVERRVAEGAQQFGPRVGLRQH 501
A G +G GA+ ++GP R A + G R GL+ H
Sbjct: 1024 AQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER-GLKGH 1063
Score = 53.5 bits (127), Expect = 1e-06
Identities = 107/415 (25%), Positives = 141/415 (33%), Gaps = 74/415 (17%)
Query: 137 SGPEGREATR--ARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNE 194
+GP+G R + P G G+ + G A GL GRP P+ A E
Sbjct: 455 AGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGE 514
Query: 195 AFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLP 254
R PQ GQ G+ G +G+PG + + G GL PG
Sbjct: 515 DGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGE--KGLPGAPGLRGL--PGKDGETG 570
Query: 255 ARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDP 314
A G P E + P P + L GP PG G+ DQ P
Sbjct: 571 AAGPPGPAGPAGERGEQGAPGPSGFQGLP--GPPGPPGEGGKP-----------GDQGVP 617
Query: 315 NQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGAR 374
+ A P ++ P+ + F P S QG +
Sbjct: 618 GE-AGAPGLVGPRGERGF-----------------------------PGERGSPGAQGLQ 647
Query: 375 SEERGARLAESRGRGVTPRASWSRQPAG--GPLSSEGHLLPLVQRDGGGLAEHRGREGEE 432
RG L + G AS P G GP +G +P +R G+A +G G+
Sbjct: 648 G-PRG--LPGTPGTDGPKGASGPAGPPGAQGPPGLQG--MP-GERGAAGIAGPKGDRGDV 701
Query: 433 GVRAGGGGTGEVRGGGSPGR-QPVGRAAVTGEAG-------AGAAG-RGAQSVRGPGVER 483
G + G G+ G G G P G A GE G AG+AG RGA RG E
Sbjct: 702 GEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERG---ET 758
Query: 484 RVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGG-----GGGGGCGAQAHRRVVG 533
A GP Q + E+ + +G G G G G Q V G
Sbjct: 759 GPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTG 813
Score = 43.1 bits (100), Expect = 0.001
Identities = 93/358 (25%), Positives = 116/358 (32%), Gaps = 73/358 (20%)
Query: 148 RFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPV 207
R P P G++ G + +G +G P Q P Q P+
Sbjct: 29 RQPGPKGQKGEPGDIKD-----IVGPKGPPGPQGPAGE---------------QGPRGDR 68
Query: 208 GQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARGRREPEAGESE 267
G +G GRDG+PGT + G G P G G + +AG ++
Sbjct: 69 GDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQ 126
Query: 268 ARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQ 327
P + GP PG G PQ FQ + +P + P V P
Sbjct: 127 LGVMQGP-------MGPMGPRGPPGPAGAPGPQG-FQ----GNPGEPGE----PGVSGPM 170
Query: 328 VQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRG 387
G G+ GD K QGAR L +G
Sbjct: 171 GPRG----------PPGPPGK-PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKG 219
Query: 388 RGVTPRASWSRQPAGGP--------LSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGG 439
P ++ AG P G P+ R GL RGR G G G
Sbjct: 220 HRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPR---GLPGERGRTGPAGAAGARG 276
Query: 440 GTGEVRGGGSPGRQPVGRAAVTGEAGA-GAAGR-GAQSVRGPGVERRVAEGAQQFGPR 495
G+ G PG PVG A G GA GA G G RGP EGAQ GPR
Sbjct: 277 NDGQPGPAGPPG--PVGPAGGPGFPGAPGAKGEAGPTGARGP-------EGAQ--GPR 323
Score = 43.1 bits (100), Expect = 0.001
Identities = 52/184 (28%), Positives = 67/184 (36%), Gaps = 25/184 (13%)
Query: 137 SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRP---SLQSPEATSNLCRARN 193
+G GRE + P G+ +G RG A+G G P P + R
Sbjct: 962 AGEPGREGSPGA-DGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRG 1020
Query: 194 EAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDV----LQSASGGSLFLGLPSP-- 247
EA Q P P G ARG + G GD G + L+ G + GLP P
Sbjct: 1021 EA---GAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1077
Query: 248 -----GHTRPLPARGRREP-----EAGESEAR--PESPPQPQPRRRLARRGPSASPGSWG 295
G + P G R P +G+ A P P PR R GP+ PG+ G
Sbjct: 1078 PSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPG 1137
Query: 296 ESHP 299
P
Sbjct: 1138 PPGP 1141
Score = 36.6 bits (83), Expect = 0.14
Identities = 120/525 (22%), Positives = 166/525 (31%), Gaps = 81/525 (15%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFR 197
GP G T P +G + SG G+ GL+G P + + + +
Sbjct: 648 GPRGLPGT----PGTDGPKGASGPAGPPGAQGPPGLQGMPG---ERGAAGIAGPKGDRGD 700
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARG 257
+ + P+ G+ RG TG G PG A+G +G P P + A
Sbjct: 701 VGEKGPEGAPGKDGGRGL---TGPIGPPGP-----AGANGEKGEVGPPGPAGS----AGA 748
Query: 258 RREP-EAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQ 316
R P E GE+ PP P GP + G G Q + + ++ P
Sbjct: 749 RGAPGERGET-----GPPGPA-----GFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQG 798
Query: 317 GAFLPAVLHPQVQT--QFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQG-- 372
+ P P T + + Q ++G G + P S+ + G
Sbjct: 799 PSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG-------RVGPPGSNGNPGPPGPP 851
Query: 373 ---ARSEERGARLAESR-GRGVTPRASWSRQPAG--------GPLSSEGHLLPLVQRDGG 420
+ +GAR GR P P G GP +EG P
Sbjct: 852 GPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQR 911
Query: 421 GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQ-------PVGRAAVTGEAGA------- 466
G+ G+ GE G G +GE G+PG PVG +TG AG
Sbjct: 912 GIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSP 971
Query: 467 ---GAAGR-GAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGG--GGG 520
G GR GA V+G E GP ++ R G G G
Sbjct: 972 GADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPS 1031
Query: 521 GGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELE 580
G GA+ + G + E RG + H G PG P
Sbjct: 1032 GPAGARGIQGPQGPRGDKGEAGEPGERGLK-GHRGFTGLQG----LPGPPGPSGDQGASG 1086
Query: 581 SLRERVPCEPPPPLPPLLLGVSLPPFGLPTSASEPDPAQRVQSTG 625
P PP P+ P G+P P P R TG
Sbjct: 1087 PAGPSGPRGPPGPVGP---SGKDGANGIPGPIGPPGPRGRSGETG 1128
Score = 36.2 bits (82), Expect = 0.18
Identities = 102/411 (24%), Positives = 135/411 (32%), Gaps = 68/411 (16%)
Query: 110 PRTP----IKG-TNWTAIHQSRSREGASHGKG-SGPEGREATRARFPSPNGKRRGSGKLW 163
P TP +KG + + ++ GA KG SG G + P P G R G+
Sbjct: 209 PGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGS----PGPMGPRGLPGERG 264
Query: 164 KRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDG 223
+ G A G G P + G T ARG E G G
Sbjct: 265 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRG 324
Query: 224 DPGTNWDV-LQSASGGSLFLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQ-PRRR 281
+PGT ASG G+P + P G P PP PQ
Sbjct: 325 EPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG-----PRGPPGPQGATGP 379
Query: 282 LARRGPSASPGSWGESHPQDDFQYEDNSDQDDPN----QGAFLPAVLHPQVQTQFDQKTQ 337
L +G + PG G Q + +P QGA PA ++ +
Sbjct: 380 LGPKGQTGEPGIAGFKGEQ--------GPKGEPGPAGPQGAPGPA---------GEEGKR 422
Query: 338 VSALSSGVSGQL--HGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRG-------- 387
+ G G + G+ N P +GA E + LA +G
Sbjct: 423 GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRP 482
Query: 388 --------RGVTPRASWSRQ-----PAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGV 434
RG+T R + P+G P +G P + G G G +G
Sbjct: 483 GEPGLPGARGLTGRPGDAGPQGKVGPSGAP-GEDGRPGPPGPQGARGQPGVMGFPGPKGA 541
Query: 435 RAGGGGTGEVRGGGSPG-RQPVGRAAVTGEAG----AGAAG-RGAQSVRGP 479
G GE G+PG R G+ TG AG AG AG RG Q GP
Sbjct: 542 NGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGP 592
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 53.1 bits (126), Expect = 1e-06
Identities = 106/478 (22%), Positives = 152/478 (31%), Gaps = 53/478 (11%)
Query: 116 GTNWTAIHQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEG 175
G + +A H + R G G P + SP+ R GSG G + G G
Sbjct: 868 GQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGS----GRSSSSGRHG 923
Query: 176 RPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDG----------DP 225
S QS ++ + Q G + YE R G
Sbjct: 924 SGSGQSSGFGHKSSSGQSSGY------TQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSS 977
Query: 226 GTNWDVLQSASGGSLFLGLPSPGH---TRPLPARGRREPEAGESEARPESPPQPQPRRRL 282
G++ Q SG LG G P P+RGR +G+S + P
Sbjct: 978 GSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSS---YGPYRSGSGWS 1034
Query: 283 ARRGP--SASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSA 340
+ RGP S S S G H + Q + G H Q Q A
Sbjct: 1035 SSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGA 1094
Query: 341 LSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQP 400
SSG S HG H S + QG+ S + RG G S+ R
Sbjct: 1095 -SSGQSSS-HGQHG-----SGSSQSSGYGRQGSGSGQSPGH--GQRGSGSRQSPSYGRHG 1145
Query: 401 AGGPLSSEGHLLPLVQRDGGGLAEHRGREGE-EGVRAGGGGTGEVRGGGSPGRQPVGRAA 459
+G SS + G H G+ G G+G G G G + G+++
Sbjct: 1146 SGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS-GQSS 1204
Query: 460 VTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGG 519
G+ + G G + G Q G + ++ G+ G G
Sbjct: 1205 RGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSG 1264
Query: 520 GGGCGAQ-------AHRRVVGQGQVRWEGVGQAA----RGRRMAHHCSQGRNSQSRHQ 566
G ++ H V GQ + G G ++ G H CSQG++ + Q
Sbjct: 1265 SGRSSSRGPYESRSGHSSVFGQHE---SGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQ 1319
Score = 52.8 bits (125), Expect = 2e-06
Identities = 104/490 (21%), Positives = 162/490 (33%), Gaps = 61/490 (12%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWK-RGSFPAIGLE----GRP 177
H S SR+ +S+G+ + R + S +G+ G G+ G P+ G GR
Sbjct: 390 HGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRS 449
Query: 178 SLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQ---ARGYEPRTGRDGD---PGTNWDV 231
S P + + + F + G TQ G+ G+ G + +
Sbjct: 450 SSSGPYVSGS---GYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGER 506
Query: 232 LQSASGGSLFLG------LPSPGHTR--------PLPARGRREPEAGESEARPESPPQPQ 277
S++G S G S GH+R P P+RGR E + +S + P
Sbjct: 507 QGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSS---YGPHGY 563
Query: 278 PRRRLARRGP--SASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQK 335
R + RGP S S S G H + Q + G H Q
Sbjct: 564 GSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 623
Query: 336 TQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRGRG-----V 390
Q A S S HG H S ++Q +R ++G+ +S RG
Sbjct: 624 GQHGATSGQSSS--HG------------QHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDF 669
Query: 391 TPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSP 450
+S+ + +G SS V G G G G G+ G
Sbjct: 670 GHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKH 729
Query: 451 GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQR 510
G + G+++ + + G+ + + G G + G Q G +
Sbjct: 730 GSRS-GQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHS 788
Query: 511 AAEGRGGGGGGGCGAQAHRRVVGQGQV-------RWEGVGQAARGRRMAHHCSQGRNSQS 563
++ G+ G G C + G GQ G G + G H SQGR+ +
Sbjct: 789 SSHGQ-HGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGST 847
Query: 564 RHQPGRDRPH 573
Q H
Sbjct: 848 SGQSSSSGQH 857
Score = 51.2 bits (121), Expect = 5e-06
Identities = 103/458 (22%), Positives = 153/458 (33%), Gaps = 63/458 (13%)
Query: 125 SRSREGASHGKGSGPEGREATRARFPSPNGK-----RRGSGKLWKRGSFPAIGLEGRPSL 179
S S + + +G+ G+ +R R S +G + GSG W S G G S
Sbjct: 1341 SGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSS----GRHGSGSG 1396
Query: 180 QSPEATSNLCRARNEAFRLQLQR-PQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGG 238
QS +E+ Q Q G + YE R G + + S+SG
Sbjct: 1397 QSSGF------GHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQ-SSRGERHGSSSGS 1449
Query: 239 SLFLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESH 298
S G G + L G+ +G+S P P R + G S+S +G
Sbjct: 1450 SSSYGQHGSGSRQSL-GHGQHGSGSGQS-------PSPSRGRHGSGSGQSSSYSPYGSGS 1501
Query: 299 PQDDFQ--YEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYT 356
+ YE S + H + ++ SSG S HG H T
Sbjct: 1502 GWSSSRGPYESGSSHSS--------GLGHRESRSGQSSGYGQHGSSSGHSST-HGQHGST 1552
Query: 357 FNIHKP-SSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLV 415
H + + Q + + G+ ++S G G S + P G S P
Sbjct: 1553 SGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGS-GQSPGHGQRGSGSRQSPSY 1611
Query: 416 QRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQS 475
R G G GR G G G GE G G E+ +G + +Q
Sbjct: 1612 GRHGSG----SGRSSSSGQH--GSGLGESSGFGHH------------ESSSGQSSSYSQH 1653
Query: 476 VRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQG 535
G G + G Q G R G ER + R++ G G G + H R QG
Sbjct: 1654 GSGSGH----SSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGR---QG 1706
Query: 536 QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPH 573
+ + G + H S G++ + P+
Sbjct: 1707 SGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPY 1744
Score = 48.1 bits (113), Expect = 5e-05
Identities = 108/470 (22%), Positives = 150/470 (31%), Gaps = 85/470 (18%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSP 182
H S SR+ HG+ G+ PSP+ R GSG P G S + P
Sbjct: 1456 HGSGSRQSLGHGQHGSGSGQS------PSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGP 1509
Query: 183 EATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQS------AS 236
+ + + + + R + G Q + G G+ S +S
Sbjct: 1510 YESGS---SHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASS 1566
Query: 237 GGSLFLGLPSPGHTRPLPARGRREPEAGESEARPE----SPPQPQPRRRLARRGPSASPG 292
G S G G ++ GR+ +G+S + S P R + G S+S G
Sbjct: 1567 GQSSSHGQHGSGSSQS-SGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 1625
Query: 293 SWGESHPQDD-FQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHG 351
G + F + ++S Q S+ S SG H
Sbjct: 1626 QHGSGLGESSGFGHHESS-------------------------SGQSSSYSQHGSGSGHS 1660
Query: 352 DHYYTFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAG-GPLSSEGH 410
Y H S + Q +R E G+ S G S SRQ +G G S
Sbjct: 1661 SGY--------GQHGSRSGQSSRGERHGSSSRSSSRYG--QHGSGSRQSSGHGRQGSGSG 1710
Query: 411 LLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAG 470
P R G GL G G G G RG P G ++V G+ +G+
Sbjct: 1711 QSPSRGRHGSGL----GHSSSHGQHGSGSGRSSSRG---PYESRSGHSSVFGQHESGSGH 1763
Query: 471 RGAQSVRGPGVERRVAEGAQQFGPRVGLRQ--HAERVERAQRAAEGRGGGG--------- 519
A S G G ++G Q G G E Q ++ G+ G G
Sbjct: 1764 SSAYSQHGSGSGHFCSQG--QHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQ 1821
Query: 520 -GGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 568
G G G R G G GQ G S +S RH G
Sbjct: 1822 QGSGSGQSPSRGRHGSGSGHSSSYGQHGSG-------SGWSSSSGRHGSG 1864
Score = 48.1 bits (113), Expect = 5e-05
Identities = 119/516 (23%), Positives = 167/516 (32%), Gaps = 85/516 (16%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGK-----RRGSGKLWKRGSFPAIGLEGRP 177
H S S + +S+G+ G+ +R R S +G + GSG W S G G
Sbjct: 2279 HGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSS----GRHGSG 2334
Query: 178 SLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDP----------GT 227
S QS S + +++ Q G + YE R G G+
Sbjct: 2335 SGQS----SGFGHHESSSWQSS-GYTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGS 2389
Query: 228 NWDVLQSASGGSLFLGLPSPGH---TRPLPARGRREPEAGESEARP--------ESPPQP 276
+ Q SG LG G P P+RGR +G+S + S P
Sbjct: 2390 SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGP 2449
Query: 277 QPR---------RRLARRGPSASPGSWGES--HPQDDFQYEDNSDQDDP--NQGAFL-PA 322
R +R G S+ G G S H Q+ S Q GA +
Sbjct: 2450 YESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQS 2509
Query: 323 VLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSS---HTSLANQGARSEERG 379
H Q + Q + SG SGQ G + S H S + + + S + G
Sbjct: 2510 SSHGQHGSGSSQSSGYGRQGSG-SGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHG 2568
Query: 380 ARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQR--------------DGGGLAEH 425
+ L ES G G +S S GH Q G + H
Sbjct: 2569 SGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSH 2628
Query: 426 RGREGEEGVRAGGGGTGEVRGGGSPGR----QPVGRAAVTGEAGAGAAGRGAQSVRGPGV 481
G+ G ++ G G G SP R +G ++ G+ G+G+ G S RGP
Sbjct: 2629 YGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGS---GRSSSRGP-Y 2684
Query: 482 ERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEG 541
E R+ + FG H+ A G G G C H GQ +
Sbjct: 2685 ESRLGH-SSVFGQHESGSGHSS-------AYSQHGSGSGHFCSQGQHGSTSGQSSTFDQE 2736
Query: 542 VGQAARGRRMAHHCSQGRNSQ--SRHQPGRDRPHHH 575
+ H S S RH G + H
Sbjct: 2737 GSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSH 2772
Score = 47.4 bits (111), Expect = 8e-05
Identities = 105/493 (21%), Positives = 161/493 (32%), Gaps = 61/493 (12%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWK-RGSFPAIGLEGRPSLQS 181
H S S + +S G+ G+ ++ + S + + G G+ G P G G S QS
Sbjct: 2019 HGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQS 2078
Query: 182 PEATSNLCRARNEAFRLQLQRPQRP-VGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSL 240
P + R + + R P +G++ G+ + G + Q SG
Sbjct: 2079 P----SYGRHGSGSGRSSSSGQHGPGLGESSGFGHH-----ESSSGQSSSYSQHGSGSGH 2129
Query: 241 FLGLPSPGHTRPLPARGRREPEAGESEAR-----PESPPQPQPRRRLARRGPSASPGSWG 295
G G +RG R + S +R S R+ + G S S G G
Sbjct: 2130 SSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHG 2189
Query: 296 ES--HPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDH 353
H Q+ S + ++G + H V F Q S SS S G
Sbjct: 2190 SGSGHSSSHGQHGSGSGRSS-SRGPYESRSGHSSV---FGQHESGSGHSSAYSQHGSGSG 2245
Query: 354 YYTFNIHKPSSHTSLANQGARSEERGARLAES-----RGRGVTPRASWSRQPAGGPLS-- 406
++ H S + Q + ++ G+ +S G G + +S+ +Q +G S
Sbjct: 2246 HFC----SQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPS 2301
Query: 407 ------SEGHLLPLVQR-DGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAA 459
GH Q G G + GR G ++ G G E S G G +
Sbjct: 2302 RGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGS 2361
Query: 460 VTGEAGAGAAGRGAQSVRG------PGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAE 513
+ R QS RG G + +G QH ++ +
Sbjct: 2362 GHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSR 2421
Query: 514 GRGGGG----------GGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS 563
GR G G G G G + R G G+G R R G++ S
Sbjct: 2422 GRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGH--RESRSGQSSGYGQHGSS 2479
Query: 564 RHQPGRDRPHHHH 576
G H H
Sbjct: 2480 ---SGHSSTHGQH 2489
Score = 47.0 bits (110), Expect = 1e-04
Identities = 103/492 (20%), Positives = 157/492 (31%), Gaps = 59/492 (11%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWK-RGSFPAIGLEGRPSLQS 181
H S S + +S G+ G+ ++ + S + + G G+ G P G G S QS
Sbjct: 1549 HGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQS 1608
Query: 182 PEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLF 241
P + + + Q G ++ G+ G + Q SG
Sbjct: 1609 PSYGRHGSGSGRSS-----SSGQHGSGLGESSGFGHHESSSGQSSS---YSQHGSGSGHS 1660
Query: 242 LGLPSPGHTRPLPARGRREPEAGESEAR-----PESPPQPQPRRRLARRGPSASPGSWGE 296
G G +RG R + S +R S R+ + G S S G G
Sbjct: 1661 SGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGS 1720
Query: 297 S--HPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHY 354
H Q+ S + ++G + H V F Q S SS S G +
Sbjct: 1721 GLGHSSSHGQHGSGSGRSS-SRGPYESRSGHSSV---FGQHESGSGHSSAYSQHGSGSGH 1776
Query: 355 YTFNIHKPSSHTSLANQGARSEERGARLAES-----RGRGVTPRASWSRQPAGGPLS--- 406
+ H S + Q + ++ G+ +S G G + +S+ +Q +G S
Sbjct: 1777 FC----SQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSR 1832
Query: 407 -----SEGHLLPLVQR-DGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAV 460
GH Q G G + GR G ++ G G E S G G +
Sbjct: 1833 GRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSG 1892
Query: 461 TGEAGAGAAGRGAQSVRG------PGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEG 514
+ R QS RG G + +G QH ++ + G
Sbjct: 1893 HSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRG 1952
Query: 515 RGGGG----------GGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSR 564
R G G G G G + R G G+G R R G++ S
Sbjct: 1953 RHGSGSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGH--RESRSGQSSGYGQHGSS- 2009
Query: 565 HQPGRDRPHHHH 576
G H H
Sbjct: 2010 --SGHSSTHGQH 2019
Score = 45.8 bits (107), Expect = 2e-04
Identities = 113/491 (23%), Positives = 163/491 (33%), Gaps = 68/491 (13%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKR-GSFPAIGLEGRPSLQ- 180
H+S SR+ +S+G GR ++R + S +G G G R G G G S
Sbjct: 548 HESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHS 607
Query: 181 -------SPEATSNLCRARNEAFRLQLQRPQRPVGQTQA---------RGYEPRTGRDGD 224
S S+ C Q G +Q+ G P GR G
Sbjct: 608 STHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGS 667
Query: 225 ------------PGTNWDVLQ----SASGGSLFLGLPS-PGHTRPLPARGR-REPEAGES 266
G+ W S SG S G S G + G +G
Sbjct: 668 DFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYR 727
Query: 267 EARPESPPQPQPRRRLARRGPSASPGSWGE-SHPQDDFQYEDNSDQDDPNQGAFLPAVLH 325
+ S + + + G S+S G G SH + + P++ + H
Sbjct: 728 KHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGH 787
Query: 326 PQVQTQFDQKTQVSA----LSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGAR 381
Q T S+ SG SGQ G F H+ S + G+ S G
Sbjct: 788 SSSHGQHGSGTSCSSSCGHYESG-SGQASG-----FGQHESGSGQGYSQHGSAS---GHF 838
Query: 382 LAESRGRGVTPRASWSRQ--PAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGG 439
++ R + ++S S Q + G SS G A RGR G ++ G
Sbjct: 839 SSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQ-----HESASHHASGRGRHGSGSGQSPGH 893
Query: 440 GTGEVRGGGSP--GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVG 497
G G SP GR G + + +G +G G S G + G Q G G
Sbjct: 894 GQRGSGSGQSPSYGRHGSG-SGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSG 952
Query: 498 ----LRQHAERVERAQRAAE-GRGGGGGGGCG--AQAHRRVVGQGQVRWEGVGQAARGRR 550
QH R ++ R+ + G G G R+ +G GQ G GQ+ R
Sbjct: 953 HSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQ-HGSGSGQSPSPSR 1011
Query: 551 MAHHCSQGRNS 561
H G++S
Sbjct: 1012 GRHGSGSGQSS 1022
Score = 41.2 bits (95), Expect = 0.006
Identities = 125/544 (22%), Positives = 175/544 (32%), Gaps = 131/544 (24%)
Query: 123 HQSRSREGAS---HGKGSGPE---GREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGR 176
H+S S + HG GSG G+ +R+ S G+R+GS GS + G G
Sbjct: 468 HESSSEHSSGYTQHGSGSGHSSGHGQHGSRSG-QSSRGERQGSSA----GSSSSYGQHGS 522
Query: 177 PSLQSPEATSNLCRARNEAFRLQLQRPQR---PVGQTQARGYEPR---TGRDGDPGTNWD 230
S QS L +R+ + Q P R G Q+ Y P +GR G
Sbjct: 523 GSRQS------LGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGP--- 573
Query: 231 VLQSASGGSLFLGLP---------------SPGHTRPLPARGRREPEA----------GE 265
+S SG S LG S GH+ G ++ G+
Sbjct: 574 -YESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQ 632
Query: 266 SEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLH 325
S + + R ++G S S S DF + + Q G H
Sbjct: 633 SSSHGQHGSGSSQSSRYGQQG-SGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPH 691
Query: 326 PQVQTQ---FDQKT---QVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERG 379
V Q F K+ Q S S SG H Y H S + Q +RSE+ G
Sbjct: 692 GSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGY--------RKHGSRSGQSSRSEQHG 743
Query: 380 ARLAES-----RGRGVTPRASWSRQPAGGPLS--------SEGHLLPLVQRDGG------ 420
+ S G G + RQ +G S S GH Q G
Sbjct: 744 SSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSS 803
Query: 421 ------------GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGE----- 463
G +H G+ G G +G G G G+++ +G+
Sbjct: 804 CGHYESGSGQASGFGQHESGSGQ-GYSQHGSASGHFSSQGRHGSTS-GQSSSSGQHDSSS 861
Query: 464 -----------AGAGAAGRGAQ---SVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQ 509
A A+GRG S + PG +R + Q P G +H R+
Sbjct: 862 GQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQS--PSYG--RHGSGSGRS- 916
Query: 510 RAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGR 569
++ GR G G G H+ GQ G G H S ++ Q R
Sbjct: 917 -SSSGRHGSGSGQSSGFGHKSSSGQSS------GYTQHGSGSGHSSSYEQHGSRSGQSSR 969
Query: 570 DRPH 573
H
Sbjct: 970 SEQH 973
Score = 39.7 bits (91), Expect = 0.016
Identities = 115/517 (22%), Positives = 162/517 (31%), Gaps = 89/517 (17%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRR-------GSGKLWKRGSFPAIGLEG 175
H S SR+ + HG+ G+ +R R S G GSG+ RG + + G
Sbjct: 1692 HGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYES--RSG 1749
Query: 176 RPSL----QSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDV 231
S+ +S S+ + Q Q+ ++ G ++
Sbjct: 1750 HSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHG-- 1807
Query: 232 LQSASGGSLFLGLPSPGH-TRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSAS 290
Q SG S G + P+RGR +G S + + R G S S
Sbjct: 1808 -QHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHG-SGS 1865
Query: 291 PGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLH 350
S G H + Q G + ++Q S SS G+ H
Sbjct: 1866 GQSSGFGHHESSSWQSSGYTQHGSGSGH----------SSSYEQHGSRSGQSS--RGEQH 1913
Query: 351 GDHY---YTFNIHKPSSHTSLANQGARSEERGARLAESRGR-GVTPRASWSRQPAG---- 402
G ++ H S SL + G G + SRGR G S S P G
Sbjct: 1914 GSSSGSSSSYGQHGSGSRQSLGH-GQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSG 1972
Query: 403 -----GPLSS-EGHLLPLVQRDG-----GGLAEHRGREG-------------------EE 432
GP S GH L R+ G +H G +
Sbjct: 1973 WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQH 2032
Query: 433 GVRAGGGGTGEVRGGGSP-----GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAE 487
G +G + G GS GRQ G G G+ R + S G +
Sbjct: 2033 GASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSS 2092
Query: 488 GAQQFGPRVGLRQ---HAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQ---GQVRWEG 541
+ Q GP +G H E + G G G G H GQ G+
Sbjct: 2093 SSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSS 2152
Query: 542 VGQAAR-------GRRMAHHCSQGRNSQSRHQPGRDR 571
G ++R R+ + H QG S S H P R R
Sbjct: 2153 SGSSSRYGQHGSGSRQSSGHGRQG--SGSGHSPSRGR 2187
Score = 38.1 bits (87), Expect = 0.047
Identities = 103/477 (21%), Positives = 160/477 (33%), Gaps = 46/477 (9%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGK-----RRGSGKL-------WKRGSFPA 170
H S SR+ HG+ + + R S +G + GSG ++ GS
Sbjct: 286 HGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQT 345
Query: 171 IGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWD 230
G G+ S +++ + GQ + G + R +++
Sbjct: 346 SGF-GQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQ---SSSYG 401
Query: 231 VLQSASGGSLFLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGP--S 288
+SAS S G S G + P G+R +G+S P S R + GP S
Sbjct: 402 QHESASRHSSGRGQHSSGSGQS-PGHGQRGSGSGQS---PSSGQHGTGFGRSSSSGPYVS 457
Query: 289 ASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLH--PQVQTQFDQKTQVSALSSGVS 346
S S G H + ++ Q G H Q+ ++ SA SS
Sbjct: 458 GSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSY 517
Query: 347 GQLHGDHYYTFNIHKPSSHTSLANQGARS-EERGARLAESRG-RGVTPRASWSRQPAGGP 404
GQ + + S + + +R E G+R + S G G S SR P
Sbjct: 518 GQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYE-- 575
Query: 405 LSSEGHLLPLVQRDGGGLAEHRGREGE-EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGE 463
S GH GL R G+ G G +G G G G+++ G+
Sbjct: 576 -SGSGH--------SSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHG-STSGQSSSCGQ 625
Query: 464 AGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGC 523
GA + + G G + G Q G + + ++ G+ G G G
Sbjct: 626 HGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWS 685
Query: 524 GAQA-HRRVVGQ--GQVRWEGVGQAA----RGRRMAHHCSQGRNSQSRHQPGRDRPH 573
+ H V GQ G G GQ++ G +H ++ Q R H
Sbjct: 686 SSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQH 742
Score = 35.8 bits (81), Expect = 0.24
Identities = 120/518 (23%), Positives = 174/518 (33%), Gaps = 105/518 (20%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGK-----RRGSGKL-------WKRGSFPA 170
H S S + + HG+ G +R R S +G + GSG ++ GS A
Sbjct: 755 HGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQA 814
Query: 171 IGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARG-YEPRTGRDGDPGTNW 229
G G+ S + S A F Q R GQ+ + G ++ +G+ G +
Sbjct: 815 SGF-GQHESGSGQGYSQHGSASGH-FSSQ-GRHGSTSGQSSSSGQHDSSSGQSSSYGQHE 871
Query: 230 DVLQSASG-GSLFLGL-PSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGP 287
ASG G G SPGH G+R +G+S P R + G
Sbjct: 872 SASHHASGRGRHGSGSGQSPGH-------GQRGSGSGQS---------PSYGRHGSGSGR 915
Query: 288 SASPGSWGESHPQDD-FQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVS 346
S+S G G Q F ++ +S Q + + ++Q S SS
Sbjct: 916 SSSSGRHGSGSGQSSGFGHKSSSGQSS----GYTQHGSGSGHSSSYEQHGSRSGQSS--R 969
Query: 347 GQLHGDHY---YTFNIHKPSSHTSLANQGARSEERGARLAESRGR---GVTPRASWSRQP 400
+ HG ++ H S SL + G G + SRGR G +S+
Sbjct: 970 SEQHGSSSGSSSSYGQHGSGSRQSLGH-GQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYR 1028
Query: 401 AG-------GPLSS-EGHLLPLVQRDG-----GGLAEHRGREG----------------- 430
+G GP S GH L R+ G +H G
Sbjct: 1029 SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSS 1088
Query: 431 --EEGVRAGGGGTGEVRGGGSP-----GRQPVGRAAVTGEAGAGAAGRGAQSV--RGPGV 481
+ G +G + G GS GRQ G G G+ R + S G G
Sbjct: 1089 CGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGS 1148
Query: 482 ERRVAEG--AQQFGPRVGLRQH-AERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVR 538
R + G G G H + + + + G G G G G R
Sbjct: 1149 GRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS-------- 1200
Query: 539 WEGVGQAARGRRMAHHCSQGRNSQ-SRHQPGRDRPHHH 575
GQ++RG R H S G +S +H G + H
Sbjct: 1201 ----GQSSRGER--HGSSSGSSSHYGQHGSGSRQSSGH 1232
Score = 34.7 bits (78), Expect = 0.52
Identities = 78/359 (21%), Positives = 123/359 (34%), Gaps = 65/359 (18%)
Query: 123 HQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGS----FPAIGLEGRPS 178
H + S + +SHG+ + + R S +G+ G G +RGS P+ G G S
Sbjct: 2502 HGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHG---QRGSGSRQSPSYGRHGSGS 2558
Query: 179 LQSPEA--------TSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWD 230
+S + S+ + Q G + GY R G + +
Sbjct: 2559 GRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQ-SSRGE 2617
Query: 231 VLQSASGGSLFLGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSAS 290
S+SG S G G +R GR+ +G+S P R + G S+S
Sbjct: 2618 RHGSSSGSSSHYGQHGSG-SRQSSGHGRQGSGSGQS---------PSRGRHGSGLGHSSS 2667
Query: 291 PGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLH 350
G G + ++G + + H V F Q S SS S
Sbjct: 2668 HGQHGSGSGRSS------------SRGPYESRLGHSSV---FGQHESGSGHSSAYSQHGS 2712
Query: 351 GDHYYTFNIHKPSSHTSLANQGARSEERGARLAES-----RGRGVTPRASWSRQPAGGPL 405
G ++ H S + Q + ++ G+ +S RG G + + + R AG
Sbjct: 2713 GSGHFC----SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQ 2768
Query: 406 --------SSEGHLLPLVQRDGG-----GLAEHRGREGEEGVRAGGGGTGEVRGGGSPG 451
S G Q G G ++H G++G GG+ GGS G
Sbjct: 2769 SLSHGRHGSGSGQSSSYGQHGSGSGQSSGYSQHGSGSGQDGYSYCKGGSN--HDGGSSG 2825
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 52.8 bits (125), Expect = 2e-06
Identities = 83/352 (23%), Positives = 116/352 (32%), Gaps = 60/352 (17%)
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARG 257
LQ Q Q Q Q + + + + P +N + L A GG+ P PG P G
Sbjct: 48 LQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGA-----PQPGPDMEQPQHG 102
Query: 258 RREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQG 317
+ A +A P PP + PG ++ P+ +P G
Sbjct: 103 GAKDSAAGGQADPPGPPL------------LSKPGDEDDAPPK----------MGEPAGG 140
Query: 318 AFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEE 377
+ HP + Q+ V+ G + + P+S G ++
Sbjct: 141 RY----EHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQ 196
Query: 378 RGARLAESRGRGVTPRASWSRQPAGGPL-----------SSEGHLLPLVQRDGGGLAEHR 426
G + +S G G+ AS + A G + +S+ + P R G G
Sbjct: 197 HGGQ--QSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGG 254
Query: 427 GREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGV--ERR 484
G G G GGGG G GG G AA AG G G S G GV R
Sbjct: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPR 314
Query: 485 VAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQ 536
G GP G +AA G GG +R GQ Q
Sbjct: 315 QQGGGMMMGPGGG------GAASLSKAAAGSAAGG--------FQRFAGQNQ 352
Score = 38.9 bits (89), Expect = 0.028
Identities = 58/216 (26%), Positives = 74/216 (34%), Gaps = 37/216 (17%)
Query: 360 HKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSR-QPAGGPLSS----EGHLLPL 414
H S++ SL G + + G + + + G A+ + P G PL S E P
Sbjct: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK 133
Query: 415 VQRDGGGLAEHRG------REGEEGVRAGGGGTGEVR------GGGSPGRQPVGRAAVTG 462
+ GG EH G ++ V GGGG V G +P G G
Sbjct: 134 MGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPG-----G 188
Query: 463 EAGAGAAGRGAQSVRGPGVERRV-AEGAQQFGPRVGLRQHAERVERAQ---------RAA 512
AG G Q G G+ A A G L+ E +Q A
Sbjct: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
Query: 513 EGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARG 548
G GGGGGGG G G G G G A G
Sbjct: 249 GGGGGGGGGGGGGSG-----GGGGGGGAGAGGAGAG 279
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 52.8 bits (125), Expect = 2e-06
Identities = 83/352 (23%), Positives = 116/352 (32%), Gaps = 60/352 (17%)
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARG 257
LQ Q Q Q Q + + + + P +N + L A GG+ P PG P G
Sbjct: 48 LQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGA-----PQPGPDMEQPQHG 102
Query: 258 RREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQG 317
+ A +A P PP + PG ++ P+ +P G
Sbjct: 103 GAKDSAAGGQADPPGPPL------------LSKPGDEDDAPPK----------MGEPAGG 140
Query: 318 AFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEE 377
+ HP + Q+ V+ G + + P+S G ++
Sbjct: 141 RY----EHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQ 196
Query: 378 RGARLAESRGRGVTPRASWSRQPAGGPL-----------SSEGHLLPLVQRDGGGLAEHR 426
G + +S G G+ AS + A G + +S+ + P R G G
Sbjct: 197 HGGQ--QSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGG 254
Query: 427 GREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGV--ERR 484
G G G GGGG G GG G AA AG G G S G GV R
Sbjct: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPR 314
Query: 485 VAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQ 536
G GP G +AA G GG +R GQ Q
Sbjct: 315 QQGGGMMMGPGGG------GAASLSKAAAGSAAGG--------FQRFAGQNQ 352
Score = 38.9 bits (89), Expect = 0.028
Identities = 58/216 (26%), Positives = 74/216 (34%), Gaps = 37/216 (17%)
Query: 360 HKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSR-QPAGGPLSS----EGHLLPL 414
H S++ SL G + + G + + + G A+ + P G PL S E P
Sbjct: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK 133
Query: 415 VQRDGGGLAEHRG------REGEEGVRAGGGGTGEVR------GGGSPGRQPVGRAAVTG 462
+ GG EH G ++ V GGGG V G +P G G
Sbjct: 134 MGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPG-----G 188
Query: 463 EAGAGAAGRGAQSVRGPGVERRV-AEGAQQFGPRVGLRQHAERVERAQ---------RAA 512
AG G Q G G+ A A G L+ E +Q A
Sbjct: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
Query: 513 EGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARG 548
G GGGGGGG G G G G G A G
Sbjct: 249 GGGGGGGGGGGGGSG-----GGGGGGGAGAGGAGAG 279
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 52.8 bits (125), Expect = 2e-06
Identities = 83/352 (23%), Positives = 116/352 (32%), Gaps = 60/352 (17%)
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARG 257
LQ Q Q Q Q + + + + P +N + L A GG+ P PG P G
Sbjct: 48 LQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGA-----PQPGPDMEQPQHG 102
Query: 258 RREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQG 317
+ A +A P PP + PG ++ P+ +P G
Sbjct: 103 GAKDSAAGGQADPPGPPL------------LSKPGDEDDAPPK----------MGEPAGG 140
Query: 318 AFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEE 377
+ HP + Q+ V+ G + + P+S G ++
Sbjct: 141 RY----EHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQ 196
Query: 378 RGARLAESRGRGVTPRASWSRQPAGGPL-----------SSEGHLLPLVQRDGGGLAEHR 426
G + +S G G+ AS + A G + +S+ + P R G G
Sbjct: 197 HGGQ--QSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGG 254
Query: 427 GREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGV--ERR 484
G G G GGGG G GG G AA AG G G S G GV R
Sbjct: 255 GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPR 314
Query: 485 VAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQ 536
G GP G +AA G GG +R GQ Q
Sbjct: 315 QQGGGMMMGPGGG------GAASLSKAAAGSAAGG--------FQRFAGQNQ 352
Score = 38.9 bits (89), Expect = 0.028
Identities = 58/216 (26%), Positives = 74/216 (34%), Gaps = 37/216 (17%)
Query: 360 HKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSR-QPAGGPLSS----EGHLLPL 414
H S++ SL G + + G + + + G A+ + P G PL S E P
Sbjct: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK 133
Query: 415 VQRDGGGLAEHRG------REGEEGVRAGGGGTGEVR------GGGSPGRQPVGRAAVTG 462
+ GG EH G ++ V GGGG V G +P G G
Sbjct: 134 MGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPG-----G 188
Query: 463 EAGAGAAGRGAQSVRGPGVERRV-AEGAQQFGPRVGLRQHAERVERAQ---------RAA 512
AG G Q G G+ A A G L+ E +Q A
Sbjct: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
Query: 513 EGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARG 548
G GGGGGGG G G G G G A G
Sbjct: 249 GGGGGGGGGGGGGSG-----GGGGGGGAGAGGAGAG 279
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 52.0 bits (123), Expect = 3e-06
Identities = 69/218 (31%), Positives = 85/218 (38%), Gaps = 27/218 (12%)
Query: 382 LAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEE--GVRAGGG 439
L E G+G R S + +G GH + RD GG +RG+EG G AG G
Sbjct: 371 LLEVEGQGGRGRPGQSLRRSG-----RGHGRGIQARDTGGGPRNRGQEGTHASGRHAGEG 425
Query: 440 GTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQS-VRGPGV----ERR----VAEGAQ 490
G R PV G A +GA VRG V ERR E A+
Sbjct: 426 APHGKLAGVQEERVPVEELLARQARGEAEARQGALGQVRGGRVRLHRERREGLLARERAR 485
Query: 491 QF--GPRVGLRQHAERVERAQRAAEGRGGGGGGG----CGAQAHRRVVGQG---QVRWEG 541
F G R L A + RAQ A+ GR GGG G Q R G G Q+ +
Sbjct: 486 LFHLGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERDAGLGRPHQLIHDR 545
Query: 542 VGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLEL 579
+GQ AR R + GR Q + H H E+
Sbjct: 546 LGQGARQRERRR--AVGRQRQRGEERRLVTQHRAHGEV 581
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/182 (29%), Positives = 68/182 (37%), Gaps = 27/182 (14%)
Query: 425 HRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGR----GAQSVRGPG 480
HRGR G +G G R GG G + G GA + G Q G
Sbjct: 271 HRGRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVA 330
Query: 481 VER----RVAEGAQQFGPRVGLRQHAERVERAQR--------AAEGRGGGGGGGCGAQAH 528
V R R G + RVG+R+ A Q EG+GG G G +
Sbjct: 331 VHRAGGCRRGGGRRCGHVRVGVREQASERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRS 390
Query: 529 RRVVGQG-QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVP 587
R G+G Q R G G RG+ +G ++ RH G PH ++ ERVP
Sbjct: 391 GRGHGRGIQARDTGGGPRNRGQ-------EGTHASGRH-AGEGAPHGKLAGVQ--EERVP 440
Query: 588 CE 589
E
Sbjct: 441 VE 442
Score = 35.4 bits (80), Expect = 0.31
Identities = 44/154 (28%), Positives = 56/154 (36%), Gaps = 21/154 (13%)
Query: 434 VRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ-- 491
+RA G G GG G RA V G G +V+GP R +G +
Sbjct: 242 LRAEFGRQGHGAGGERGGAAVEFRARVHCHRGRAGGQGGDFAVQGPRGRRHGGQGGGEQT 301
Query: 492 ----------FGPRVGLRQHAERVER--AQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRW 539
G R H ++E A A G GGG CG H RV + Q
Sbjct: 302 AAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCG---HVRVGVREQASE 358
Query: 540 EGVGQAARGR----RMAHHCSQGRNSQSRHQPGR 569
G GQA G+ + +GR QS + GR
Sbjct: 359 RGHGQALGGQDVLLEVEGQGGRGRPGQSLRRSGR 392
Score = 31.2 bits (69), Expect = 5.8
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
Query: 464 AGAGAAGRGAQSVR-GPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGG 522
+G G GR A VR G + + Q G R+ LR R G GG GG
Sbjct: 207 SGTGLRGRAAGPVRLGFQAANQPLDALQFAGGRLFLRAEFGR------QGHGAGGERGGA 260
Query: 523 CGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS-----RHQPGRD---RPHH 574
R +G+ +G A +G R H QG Q+ RH+ G +P
Sbjct: 261 AVEFRARVHCHRGRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRA 320
Query: 575 HHLELE 580
H +++E
Sbjct: 321 HGVQIE 326
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 52.0 bits (123), Expect = 3e-06
Identities = 77/301 (25%), Positives = 100/301 (33%), Gaps = 58/301 (19%)
Query: 359 IHKPSSHTSLANQGARSEERGARLAESRG---RGVTPRASWSR---QPAGGPL------- 405
I + T L+ R RLA G R PRA R +PA G +
Sbjct: 73 IRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKG 132
Query: 406 ---SSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG------ 456
G L +R G GL R R G+ A GG RG G G + +G
Sbjct: 133 RLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGL 192
Query: 457 --RAAVTGEAGAGAAGRGAQSVRGPGVER-----------RVAEGAQQFGPRVGLRQHAE 503
AA+ G G G G P + R+ A++ R L +H +
Sbjct: 193 PTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
Query: 504 RVERAQRAAEGRGGGGGGGC-----------GAQAHRRVVGQGQVRWEGVGQAARGRRMA 552
+ R A G G GA+ HRR G+ + G Q G A
Sbjct: 253 -LSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSA 308
Query: 553 HHCSQ---GRNSQSRHQPGRD----RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPP 605
Q GR + P R PH H + +P PPP PP L LPP
Sbjct: 309 PGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPP 367
Query: 606 F 606
+
Sbjct: 368 W 368
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 52.0 bits (123), Expect = 3e-06
Identities = 69/218 (31%), Positives = 85/218 (38%), Gaps = 27/218 (12%)
Query: 382 LAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEE--GVRAGGG 439
L E G+G R S + +G GH + RD GG +RG+EG G AG G
Sbjct: 228 LLEVEGQGGRGRPGQSLRRSG-----RGHGRGIQARDTGGGPRNRGQEGTHASGRHAGEG 282
Query: 440 GTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQS-VRGPGV----ERR----VAEGAQ 490
G R PV G A +GA VRG V ERR E A+
Sbjct: 283 APHGKLAGVQEERVPVEELLARQARGEAEARQGALGQVRGGRVRLHRERREGLLARERAR 342
Query: 491 QF--GPRVGLRQHAERVERAQRAAEGRGGGGGGG----CGAQAHRRVVGQG---QVRWEG 541
F G R L A + RAQ A+ GR GGG G Q R G G Q+ +
Sbjct: 343 LFHLGRRCALANRAPALLRAQAASAGRDGGGAMAPQMRLGPQGGERDAGLGRPHQLIHDR 402
Query: 542 VGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLEL 579
+GQ AR R + GR Q + H H E+
Sbjct: 403 LGQGARQRERRR--AVGRQRQRGEERRLVTQHRAHGEV 438
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/182 (29%), Positives = 68/182 (37%), Gaps = 27/182 (14%)
Query: 425 HRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGR----GAQSVRGPG 480
HRGR G +G G R GG G + G GA + G Q G
Sbjct: 128 HRGRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVA 187
Query: 481 VER----RVAEGAQQFGPRVGLRQHAERVERAQR--------AAEGRGGGGGGGCGAQAH 528
V R R G + RVG+R+ A Q EG+GG G G +
Sbjct: 188 VHRAGGCRRGGGRRCGHVRVGVREQASERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRS 247
Query: 529 RRVVGQG-QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVP 587
R G+G Q R G G RG+ +G ++ RH G PH ++ ERVP
Sbjct: 248 GRGHGRGIQARDTGGGPRNRGQ-------EGTHASGRH-AGEGAPHGKLAGVQ--EERVP 297
Query: 588 CE 589
E
Sbjct: 298 VE 299
Score = 35.4 bits (80), Expect = 0.31
Identities = 44/154 (28%), Positives = 56/154 (36%), Gaps = 21/154 (13%)
Query: 434 VRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ-- 491
+RA G G GG G RA V G G +V+GP R +G +
Sbjct: 99 LRAEFGRQGHGAGGERGGAAVEFRARVHCHRGRAGGQGGDFAVQGPRGRRHGGQGGGEQT 158
Query: 492 ----------FGPRVGLRQHAERVER--AQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRW 539
G R H ++E A A G GGG CG H RV + Q
Sbjct: 159 AAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCG---HVRVGVREQASE 215
Query: 540 EGVGQAARGR----RMAHHCSQGRNSQSRHQPGR 569
G GQA G+ + +GR QS + GR
Sbjct: 216 RGHGQALGGQDVLLEVEGQGGRGRPGQSLRRSGR 249
Score = 31.2 bits (69), Expect = 5.8
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
Query: 464 AGAGAAGRGAQSVR-GPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGG 522
+G G GR A VR G + + Q G R+ LR R G GG GG
Sbjct: 64 SGTGLRGRAAGPVRLGFQAANQPLDALQFAGGRLFLRAEFGR------QGHGAGGERGGA 117
Query: 523 CGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS-----RHQPGRD---RPHH 574
R +G+ +G A +G R H QG Q+ RH+ G +P
Sbjct: 118 AVEFRARVHCHRGRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRA 177
Query: 575 HHLELE 580
H +++E
Sbjct: 178 HGVQIE 183
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 52.0 bits (123), Expect = 3e-06
Identities = 77/301 (25%), Positives = 100/301 (33%), Gaps = 58/301 (19%)
Query: 359 IHKPSSHTSLANQGARSEERGARLAESRG---RGVTPRASWSR---QPAGGPL------- 405
I + T L+ R RLA G R PRA R +PA G +
Sbjct: 73 IRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKG 132
Query: 406 ---SSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG------ 456
G L +R G GL R R G+ A GG RG G G + +G
Sbjct: 133 RLREGRGALRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGL 192
Query: 457 --RAAVTGEAGAGAAGRGAQSVRGPGVER-----------RVAEGAQQFGPRVGLRQHAE 503
AA+ G G G G P + R+ A++ R L +H +
Sbjct: 193 PTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
Query: 504 RVERAQRAAEGRGGGGGGGC-----------GAQAHRRVVGQGQVRWEGVGQAARGRRMA 552
+ R A G G GA+ HRR G+ + G Q G A
Sbjct: 253 -LSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSA 308
Query: 553 HHCSQ---GRNSQSRHQPGRD----RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPP 605
Q GR + P R PH H + +P PPP PP L LPP
Sbjct: 309 PGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPP 367
Query: 606 F 606
+
Sbjct: 368 W 368
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 50.8 bits (120), Expect = 7e-06
Identities = 76/301 (25%), Positives = 100/301 (33%), Gaps = 58/301 (19%)
Query: 359 IHKPSSHTSLANQGARSEERGARLAESRG---RGVTPRASWSR---QPAGGPL------- 405
I + T L+ R RLA G R PRA R +PA G +
Sbjct: 73 IRRNPLRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKG 132
Query: 406 ---SSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVG------ 456
G + +R G GL R R G+ A GG RG G G + +G
Sbjct: 133 RLREGRGAVRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGL 192
Query: 457 --RAAVTGEAGAGAAGRGAQSVRGPGVER-----------RVAEGAQQFGPRVGLRQHAE 503
AA+ G G G G P + R+ A++ R L +H +
Sbjct: 193 PTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQ 252
Query: 504 RVERAQRAAEGRGGGGGGGC-----------GAQAHRRVVGQGQVRWEGVGQAARGRRMA 552
+ R A G G GA+ HRR G+ + G Q G A
Sbjct: 253 -LSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRAR---GGCAQLRAGTPSA 308
Query: 553 HHCSQ---GRNSQSRHQPGRD----RPHHHHLELESLRERVPCEPPPPLPPLLLGVSLPP 605
Q GR + P R PH H + +P PPP PP L LPP
Sbjct: 309 PGGLQDCRGRQGEENAHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP-PPKLAPPPLPP 367
Query: 606 F 606
+
Sbjct: 368 W 368
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 50.4 bits (119), Expect = 9e-06
Identities = 101/415 (24%), Positives = 130/415 (31%), Gaps = 78/415 (18%)
Query: 137 SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAF 196
+GP+G + + P +G R +G + G A G +G P + A +
Sbjct: 748 AGPKGADGS----PGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRG 803
Query: 197 RLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLF-------LGLPS--- 246
P G A G G GD G D G +G P
Sbjct: 804 EPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKG 863
Query: 247 -------PGHTRPLPARGRREPEAGESEARPESPPQPQPRR----RLARRGPSASPGSWG 295
PG T A GR P A P PP P + GP+ PG G
Sbjct: 864 ARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVG 923
Query: 296 ESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYY 355
P + + D P A P P Q Q+ V G+ GQ G+ +
Sbjct: 924 PPGPPGPAGEKGSPGADGP---AGAPGT--PGPQGIAGQRGVV-----GLPGQ-RGERGF 972
Query: 356 TFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLV 415
+ PS S ERG P GP G
Sbjct: 973 P-GLPGPSGEPGKQGPSGASGERG------------PPGPMGPPGLAGPPGESG------ 1013
Query: 416 QRDGGGLAE-HRGREGEEGVRAGGGGTGEVRGGGSPGRQ----PVGRAAVTGEAG----A 466
R+G AE GR+G G + G TG G+PG PVG A +G+ G A
Sbjct: 1014 -REGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPA 1072
Query: 467 GAAGR-GAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGG 520
G AG G RGP GP+ E E+ R +G G G
Sbjct: 1073 GPAGPVGPVGARGPA------------GPQGPRGDKGETGEQGDRGIKGHRGFSG 1115
Score = 47.4 bits (111), Expect = 8e-05
Identities = 91/363 (25%), Positives = 114/363 (31%), Gaps = 75/363 (20%)
Query: 134 GKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARN 193
G+ GP R FP +G G +RGS G +G P + L A+
Sbjct: 485 GERGGPGSRG-----FPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKG 539
Query: 194 EAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDV-LQSASGGSLFLGLPSPGHTRP 252
P G G + R G G PG + G G P R
Sbjct: 540 LTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERG 599
Query: 253 LPAR-GRREPEAGESEARPESPPQPQ-PRRRLARRGPSASPGSWGESHPQDDFQYEDNSD 310
+P G P + EA + PP P P +GP+ SPG G P
Sbjct: 600 VPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAG--------- 650
Query: 311 QDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLAN 370
P A P GV G L PS
Sbjct: 651 ---PPGEAGKPG-------------------EQGVPGDLGAPG--------PS------- 673
Query: 371 QGARSE-----ERGAR----LAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGG 421
GAR E ERG + A RG P ++ AG P + P +Q G
Sbjct: 674 -GARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQ----G 728
Query: 422 LAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAG----AGAAG-RGAQSV 476
+ RG G G + G G GSPG+ G +TG G AGA G +G
Sbjct: 729 MPGERGAAGLPGPKGDRGDAGPKGADGSPGKD--GVRGLTGPIGPPGPAGAPGDKGESGP 786
Query: 477 RGP 479
GP
Sbjct: 787 SGP 789
Score = 46.2 bits (108), Expect = 2e-04
Identities = 57/185 (30%), Positives = 69/185 (37%), Gaps = 21/185 (11%)
Query: 130 GASHGKGS----GPEGREATRARFPSPNG--KRRG----SGKLWKRGSFPAI-GLEGRPS 178
G + KGS GP G T P P G +RG G+ +RG FP + G G P
Sbjct: 929 GPAGEKGSPGADGPAGAPGT----PGPQGIAGQRGVVGLPGQRGERG-FPGLPGPSGEPG 983
Query: 179 LQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGG 238
Q P S L P G+ A G E GRDG PG D ++ G
Sbjct: 984 KQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAG 1043
Query: 239 SLFLGLP-SPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGES 297
G P +PG P+ G+ A P P P R A GP G GE+
Sbjct: 1044 P--PGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPA--GPQGPRGDKGET 1099
Query: 298 HPQDD 302
Q D
Sbjct: 1100 GEQGD 1104
Score = 41.6 bits (96), Expect = 0.004
Identities = 93/352 (26%), Positives = 119/352 (33%), Gaps = 60/352 (17%)
Query: 138 GPEGREATR-----ARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRAR 192
GP G + R A P G R SG +G G +G P SP +
Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPG--SPGENGAPGQMG 302
Query: 193 NEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLG-LPSPGHTR 251
+ RP P G ARG + TG G PG +G F G + + G
Sbjct: 303 PRGLPGERGRPGAP-GPAGARGNDGATGAAGPPGPT-----GPAGPPGFPGAVGAKGEAG 356
Query: 252 PLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQ 311
P RG P+ E P P GP+ +PG+ G+ + N
Sbjct: 357 PQGPRGSEGPQGVRGEPGPPGP--------AGAAGPAGNPGADGQPGAKG-----ANGAP 403
Query: 312 DDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQ 371
F P P SG G G N +P + S +
Sbjct: 404 GIAGAPGF-PGARGP----------------SGPQGP-GGPPGPKGNSGEPGAPGSKGDT 445
Query: 372 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 431
GA+ E + G P ++ A G G P +R G G RG G
Sbjct: 446 GAKGEPGPVGVQGPPG----PAGEEGKRGARGEPGPTGLPGPPGERGGPG---SRGFPGA 498
Query: 432 EGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAG-AGAAG-RGAQSVRG-PG 480
+GV G GE GSPG P G GEAG G AG GA+ + G PG
Sbjct: 499 DGVAGPKGPAGE---RGSPG--PAGPKGSPGEAGRPGEAGLPGAKGLTGSPG 545
Score = 40.0 bits (92), Expect = 0.012
Identities = 50/205 (24%), Positives = 61/205 (29%), Gaps = 33/205 (16%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFR 197
G G E + R SP K G + G G G P P + R E
Sbjct: 1016 GAPGAEGSPGRDGSPGAK----GDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGP 1071
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARG 257
P PVG G + G G+ G D + G F GL P P + G
Sbjct: 1072 AGPAGPVGPVGARGPAGPQGPRGDKGETGEQGD--RGIKGHRGFSGLQGP--PGPPGSPG 1127
Query: 258 RREPEAGESEARPESPP-------------------QPQPRRRLARRGPSASPGSWGESH 298
+ P A P PP P PR R GP PG G
Sbjct: 1128 EQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPG 1187
Query: 299 PQD------DFQYEDNSDQDDPNQG 317
P DF + Q+ + G
Sbjct: 1188 PPGPPSAGFDFSFLPQPPQEKAHDG 1212
Score = 39.3 bits (90), Expect = 0.021
Identities = 88/357 (24%), Positives = 110/357 (30%), Gaps = 97/357 (27%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFR 197
GP G P P GK G G + G PA GRP P
Sbjct: 887 GPSGNAGPPGP-PGPAGKEGGKGPRGETG--PA----GRPGEVGPPG------------- 926
Query: 198 LQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPS-------PGHT 250
P P G+ + G + G G PG Q +G +GLP PG
Sbjct: 927 -----PPGPAGEKGSPGADGPAGAPGTPGP-----QGIAGQRGVVGLPGQRGERGFPGLP 976
Query: 251 RPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSD 310
P G++ P E P P GP G GES ++ + S
Sbjct: 977 GPSGEPGKQGPSGASGERGPPGP-----------MGPPGLAGPPGESG-REGAPGAEGSP 1024
Query: 311 QDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLAN 370
D + GA GD T P + +
Sbjct: 1025 GRDGSPGA-------------------------------KGDRGETGPAGPPGAPGAPGA 1053
Query: 371 QGARSEERGARLAESRGRGVTPRASWSRQPAG--GPLSSEGHLLPLVQRDGGGLAEHRGR 428
G +S RG T A PAG GP+ + G P R G +G
Sbjct: 1054 PGPVGPA-----GKSGDRGETGPAG----PAGPVGPVGARGPAGPQGPRGDKGETGEQGD 1104
Query: 429 EGEEGVRAGGGGTGEVRGGGSPGRQ-PVGRAAVTGEAG----AGAAGR-GAQSVRGP 479
G +G R G G GSPG Q P G + G G AGA G+ G + GP
Sbjct: 1105 RGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGP 1161
Score = 38.9 bits (89), Expect = 0.028
Identities = 92/372 (24%), Positives = 117/372 (31%), Gaps = 74/372 (19%)
Query: 125 SRSREGASHGKGS-GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPE 183
+R +GA+ G GP G A FP G + +G RGS G+ G P P
Sbjct: 321 ARGNDGATGAAGPPGPTG-PAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379
Query: 184 ATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPG-TNWDVLQSASGGSLFL 242
+ P G A G G +G PG A G S
Sbjct: 380 GAAG------------------PAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPS--- 418
Query: 243 GLPSPGHTRPLPARGRREPEA----GESEARPESPP-----QPQPRRRLARRGPSASPGS 293
G PG P P EP A G++ A+ E P P P +RG PG
Sbjct: 419 GPQGPGGP-PGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGP 477
Query: 294 WGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDH 353
G P ++ P F A A G +G+
Sbjct: 478 TGLPGPP--------GERGGPGSRGFPGA--------------DGVAGPKGPAGERGSP- 514
Query: 354 YYTFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAG--GPLSSEGHL 411
P+ + R E G L ++G +P + G GP +G
Sbjct: 515 -------GPAGPKGSPGEAGRPGEAG--LPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 565
Query: 412 LPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGR 471
P G A G G +G G GE G PG VG A GEAGA +
Sbjct: 566 GPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPG--AVGPAGKDGEAGA----Q 619
Query: 472 GAQSVRGPGVER 483
G GP ER
Sbjct: 620 GPPGPAGPAGER 631
Score = 36.2 bits (82), Expect = 0.18
Identities = 90/364 (24%), Positives = 109/364 (29%), Gaps = 54/364 (14%)
Query: 137 SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAF 196
+GP G + SP G + G G G +G P S R
Sbjct: 625 AGPAGERGEQGPAGSP-GFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPG 683
Query: 197 RLQLQRPQRPVGQTQARGYEPRTGRDGDPGT-------NWDVLQSASGGSLFLGLPSP-- 247
+Q P P G A G G GD G LQ G GLP P
Sbjct: 684 ERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG 743
Query: 248 --GHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDF-- 303
G P A G + P PP GP+ +PG GES P
Sbjct: 744 DRGDAGPKGADGSPGKDGVRGLTGPIGPP-----------GPAGAPGDKGESGPSGPAGP 792
Query: 304 -----QYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFN 358
D + P F P Q K + +G G G
Sbjct: 793 TGARGAPGDRGEPGPPGPAGFAGP---PGADGQPGAKGEPG--DAGAKGDA-GPPGPAGP 846
Query: 359 IHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAG--GPLSSEGHLLPLVQ 416
P ++ GA+ +RG P A+ AG GP G+ P
Sbjct: 847 AGPPGPIGNVGAPGAKG---------ARGSAGPPGATGFPGAAGRVGPPGPSGNAGP--- 894
Query: 417 RDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAG-AGAAGR-GAQ 474
G A G +G G G GEV G PG P G G G AGA G G Q
Sbjct: 895 PGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPG--PAGEKGSPGADGPAGAPGTPGPQ 952
Query: 475 SVRG 478
+ G
Sbjct: 953 GIAG 956
Score = 35.4 bits (80), Expect = 0.31
Identities = 96/401 (23%), Positives = 130/401 (32%), Gaps = 39/401 (9%)
Query: 129 EGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNL 188
+G KG+ A FP G R SG G G G P + +
Sbjct: 391 DGQPGAKGANGAPGIAGAPGFP---GARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTG- 446
Query: 189 CRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLP-SP 247
A+ E + +Q P P G+ RG G G PG + GG G P +
Sbjct: 447 --AKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE-----RGGPGSRGFPGAD 499
Query: 248 GHTRPL-PARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYE 306
G P PA R P + P +P +G + SPGS G D
Sbjct: 500 GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGP----DGKTGP 555
Query: 307 DNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHT 366
D G P Q + +A G +G+ G +
Sbjct: 556 PGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGE-RGVPGPPGAVGPAGKDG 614
Query: 367 SLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSS-----EGHLLPLVQRDGGG 421
QG A +G +P PAG P + +G L G
Sbjct: 615 EAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSG 674
Query: 422 LAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGA-GAAG-RGAQSVRGP 479
RG GE GV+ G G G+PG G+AGA GA G +GA ++G
Sbjct: 675 ARGERGFPGERGVQGPPGPAGPRGANGAPGND-----GAKGDAGAPGAPGSQGAPGLQGM 729
Query: 480 GVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGG 520
ER A GP+ +R + + A+G G G
Sbjct: 730 PGERGAAGLP---GPK------GDRGDAGPKGADGSPGKDG 761
Score = 33.1 bits (74), Expect = 1.5
Identities = 73/296 (24%), Positives = 95/296 (32%), Gaps = 51/296 (17%)
Query: 243 GLPSP-GHTRPLPARGRREPEAGES-EARPESPPQPQPRRRLARRGPSASPGSWGESHPQ 300
G+ P G T P RG P + +P P P P GP PG G PQ
Sbjct: 109 GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPP------GPPGPPGLGGNFAPQ 162
Query: 301 DDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQ--LHGDHYYTFN 358
+ Y++ S G +P + P G+ G G +
Sbjct: 163 LSYGYDEKS-----TGGISVPGPMGPSGPR-------------GLPGPPGAPGPQGFQGP 204
Query: 359 IHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRD 418
+P + G R G P R P G P + G +
Sbjct: 205 PGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPG-PQGARG-----LPGT 258
Query: 419 GG--GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQ----PVGRAAVTGEAG------- 465
G G+ HRG G +G + G G GSPG +G + GE G
Sbjct: 259 AGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGP 318
Query: 466 AGAAGR-GAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGG 520
AGA G GA GP A G F VG + E + R +EG G G
Sbjct: 319 AGARGNDGATGAAGPPGPTGPA-GPPGFPGAVGAK--GEAGPQGPRGSEGPQGVRG 371
Score = 30.8 bits (68), Expect = 7.6
Identities = 41/128 (32%), Positives = 46/128 (35%), Gaps = 13/128 (10%)
Query: 401 AGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAV 460
A GP+ G P + G A GR GE G G G G PG + G
Sbjct: 213 ASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMK--GHRGF 270
Query: 461 TGEAGA-GAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGG-- 517
+G GA G AG A G Q GPR GL ER + A G G
Sbjct: 271 SGLDGAKGDAGPAGPKGEPGSPGENGAPG--QMGPR-GLPG-----ERGRPGAPGPAGAR 322
Query: 518 GGGGGCGA 525
G G GA
Sbjct: 323 GNDGATGA 330
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 50.1 bits (118), Expect = 1e-05
Identities = 114/440 (25%), Positives = 149/440 (33%), Gaps = 75/440 (17%)
Query: 129 EGASHGKG----SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEA 184
+G S KG +GP+G P P+G+ GK G + G G P L+
Sbjct: 354 KGESGNKGEPGSAGPQGP-------PGPSGEE---GKRGPNGEAGSAGPPGPPGLRGSPG 403
Query: 185 TSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLF--- 241
+ L A A + + G RG GR G+PG S G++
Sbjct: 404 SRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAG 463
Query: 242 ----LGLPS----PGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLA-------RRG 286
+GLP PG P ARG P P + A G
Sbjct: 464 KEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPG 523
Query: 287 PSASPGSWGESHPQDDFQYEDNSDQDDPNQGAF--LPAVLHPQVQTQFDQKTQVSALSSG 344
P + G+ G PQ +Q P F LP P + G
Sbjct: 524 PDGNNGAQGPPGPQG--VQGGKGEQGPPGPPGFQGLPGPSGPAGEV-------------G 568
Query: 345 VSGQ--LHGDHYYTFNIHKPSSHTSLANQGARSEERGAR-LAESRGRGVTPRASWSRQPA 401
G+ LHG+ F + P+ S G SRG P ++
Sbjct: 569 KPGERGLHGE----FGLPGPAGPRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEP 624
Query: 402 G--------GPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQ 453
G GP G LP +R G+ +G +GE G+R G G G+PG
Sbjct: 625 GVVGAVGTAGPSGPSG--LP-GERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAV 681
Query: 454 PV-GRAAVTGEAG-AGAAG-RGAQSVRG-PGVERRVA-EGAQQF-GPRVGLRQHAERVER 507
G A TG+ G AGAAG G RG PG V G F GP Q + ER
Sbjct: 682 GAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGER 741
Query: 508 AQRAAEGRGG--GGGGGCGA 525
+ +G G G G GA
Sbjct: 742 GAKGPKGENGVVGPTGPVGA 761
Score = 45.8 bits (107), Expect = 2e-04
Identities = 98/395 (24%), Positives = 127/395 (32%), Gaps = 57/395 (14%)
Query: 130 GASHGKG-SGPEGREATRARFPSPNGKRR--GS----GKLWKRGSFPAIGLEGRPSLQSP 182
GAS G GP G +A R P G R GS G K G G++GRP P
Sbjct: 424 GASGPAGVRGPNG-DAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGP 482
Query: 183 EATSNLCRARNEAFRLQLQRPQRPV---GQTQARGYEPRTGRDGDPGTNWD-------VL 232
AR E + P+ P G+ +G+ G G PG + +
Sbjct: 483 AG------ARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGP 536
Query: 233 QSASGGSLFLGLPSPGHTRPLPARGRREPEAGESEARPESPP--QPQPRRRLARRGPSAS 290
Q GG G P P + LP E G+ R P P RGP
Sbjct: 537 QGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGP--- 593
Query: 291 PGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVL------HPQVQTQFDQKTQVSALSSG 344
PG G + P S P+ P V+ P + + + + G
Sbjct: 594 PGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGG 653
Query: 345 VSGQLHGDHYYTFNIHKPSSHTSLANQGA--------RSEERGARLAESRGRGVTPRASW 396
+ G+ I P + GA + +RG A PR S
Sbjct: 654 KGEK--GEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSP 711
Query: 397 SRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPG-RQPV 455
+ GP G P G RG +G +G G TG V G G P
Sbjct: 712 GERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPP 771
Query: 456 GRAAVTGEAG-------AGAAGR----GAQSVRGP 479
G A G+ G GAAGR G + GP
Sbjct: 772 GPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGP 806
Score = 41.6 bits (96), Expect = 0.004
Identities = 117/469 (24%), Positives = 147/469 (31%), Gaps = 79/469 (16%)
Query: 129 EGASHGKGS-GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSN 187
+G GKG GP G + P P+G GK +RG GL G +
Sbjct: 537 QGVQGGKGEQGPPGPPGFQG-LPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPG 595
Query: 188 LCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSP 247
A P P+G G G G+PG V +G S GLP
Sbjct: 596 ESGAAG---------PTGPIGSRGPSGPPGPDGNKGEPGVVGAV--GTAGPSGPSGLPGE 644
Query: 248 GHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYED 307
+P + E GE R E R G +PG+ G P
Sbjct: 645 RGAAGIPGG---KGEKGEPGLRGEIGNP-------GRDGARGAPGAVGAPGPA------- 687
Query: 308 NSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTS 367
+ D GA PA + ++ A +G +G
Sbjct: 688 GATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP-----------------AG 730
Query: 368 LANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQR-DGG------ 420
A Q ERGA+ + V P A GP G P R DGG
Sbjct: 731 AAGQPGAKGERGAKGPKGENGVVGPTGPVG---AAGPAGPNGPPGPAGSRGDGGPPGMTG 787
Query: 421 --GLAEHRGREGEEGVRAGGGGTGEVRGGGSPG----RQPVGRAAVTGEAGAGAAGRGAQ 474
G A G G G+ G G G G + PVGR TGE GA G
Sbjct: 788 FPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGR---TGEVGA-VGPPGFA 843
Query: 475 SVRGPGVERRVAEGAQQFGPR--VG----LRQHAERVERAQRAAEGRGG-----GGGGGC 523
+GP E A GP+ +G L R ER G G G G
Sbjct: 844 GEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPP 903
Query: 524 GAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRP 572
GA+ VG V G+A R + GR+ Q H+ R P
Sbjct: 904 GARGPPGAVGSPGVN-GAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYP 951
Score = 39.3 bits (90), Expect = 0.021
Identities = 96/372 (25%), Positives = 115/372 (30%), Gaps = 50/372 (13%)
Query: 137 SGPEGREATRARF--PSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNE 194
+G G R R P P G R G + G IG G P A
Sbjct: 213 TGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGN 272
Query: 195 AFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLP 254
A P P G+ G G G+PG N L A G + GLP LP
Sbjct: 273 A---GPAGPAGPRGEVGLPGLSGPVGPPGNPGANG--LTGAKGAA---GLPGVAGAPGLP 324
Query: 255 A-RGRREP--EAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQ 311
RG P AG + AR +P P G PGS G P E
Sbjct: 325 GPRGIPGPVGAAGATGAR-GLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGP 383
Query: 312 DDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQ 371
+ A P S S L G + P S +
Sbjct: 384 NGEAGSAGPPG--------------PPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPA 429
Query: 372 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 431
G R A GR P R G P G++ P + GL GR G
Sbjct: 430 GVRGPNGDA------GRPGEPGLMGPRGLPGSP----GNIGPAGKEGPVGLPGIDGRPGP 479
Query: 432 EGVRAGGGGTGEVRGGGSPG-RQPVGRAAVTGEAG-AGAAG-RGA------QSVRGPGVE 482
G G G + G PG + P G G+ G AG AG RGA +GP
Sbjct: 480 IGPAGARGEPGNI---GFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGP 536
Query: 483 RRVAEGAQQFGP 494
+ V G + GP
Sbjct: 537 QGVQGGKGEQGP 548
Score = 33.1 bits (74), Expect = 1.5
Identities = 48/176 (27%), Positives = 59/176 (33%), Gaps = 21/176 (11%)
Query: 128 REGASHGKGS----GPEGREATR--ARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQS 181
R+GA G+ GP G R A P G G +RG +G G
Sbjct: 671 RDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGE---VGPAGPNGFAG 727
Query: 182 PEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLF 241
P + A+ E + VG T G G +G PG GS
Sbjct: 728 PAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGP---------AGSRG 778
Query: 242 LGLPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGES 297
G P PG T A GR P + P PP P + L RGP G G +
Sbjct: 779 DGGP-PGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGL--RGPRGDQGPVGRT 831
Score = 32.3 bits (72), Expect = 2.6
Identities = 102/416 (24%), Positives = 126/416 (30%), Gaps = 63/416 (15%)
Query: 110 PRTPIKGTNWTAIHQSRSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFP 169
P P G N+ A + +G G G GP G P G +G +G
Sbjct: 68 PGPPGLGGNFAAQY-----DGKGVGLGPGPMG-------LMGPRGPPGAAGAPGPQGFQG 115
Query: 170 AIGLEGRPSLQSPEATSNLCRARNEAFRL-QLQRPQRP-----VGQTQARGYEPRTGRDG 223
G G P P +A +P RP VG ARG+ G G
Sbjct: 116 PAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 175
Query: 224 DPG----TNWDVLQSASGGSLFLGLP-------SPGHT--RPLPARGRREPEAGESEARP 270
G D L+ G G P +PG T R LP R G + AR
Sbjct: 176 FKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARG 235
Query: 271 E--SPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQV 328
S P + GP PG+ G + P LP + P
Sbjct: 236 SDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVG 295
Query: 329 QTQFDQKTQVSALSS-----GVSGQ--LHGDHYYTFNIHKPSSHTSLANQGARSEERGAR 381
++ GV+G L G P + GAR
Sbjct: 296 PPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGI------PGPVGAAGATGARGLVGEPG 349
Query: 382 LAESRGRGVTPRASWSRQPAG--GPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGG 439
A S+G S P G GP EG +R G A G G G+R G
Sbjct: 350 PAGSKGESGNKGEPGSAGPQGPPGPSGEEG------KRGPNGEAGSAGPPGPPGLRGSPG 403
Query: 440 GTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPR 495
G PG GRA V G G+ A G VRGP + GPR
Sbjct: 404 SR------GLPGAD--GRAGVMGPPGSRGAS-GPAGVRGPNGDAGRPGEPGLMGPR 450
Score = 30.8 bits (68), Expect = 7.6
Identities = 44/174 (25%), Positives = 56/174 (32%), Gaps = 14/174 (8%)
Query: 130 GASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLC 189
G + KG E A P P G G L GS GL G +
Sbjct: 841 GFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIA 900
Query: 190 RARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGH 249
+ P VG G GRDG+PG + + G PG+
Sbjct: 901 GPPGA------RGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKG-ERGYPGN 953
Query: 250 TRPLPARGRREPE-----AGESEARPESPPQPQ--PRRRLARRGPSASPGSWGE 296
P+ A G P AG+ R E+ P P + RGPS G G+
Sbjct: 954 IGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGD 1007
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 49.7 bits (117), Expect = 2e-05
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 24/218 (11%)
Query: 367 SLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHR 426
S ++ + +R A+ + RG + +PA G S +R GG + +
Sbjct: 197 SRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKS--------RRGGGKKPQKQ 248
Query: 427 GREGEEGVRAGGGGTGEVRGGGSPGRQPVGR-AAVTGEAGAGAAGRGAQSVRGPGVERRV 485
R G++ G G+ RGGG + G+ AA+ G GAA G + P + R
Sbjct: 249 RRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATAGEK----PAAKGRG 304
Query: 486 AEGAQQFG---PRVGL-----RQHAERVERAQRAAEGRGGGG---GGGCGAQAHRRVVGQ 534
G + G PR G R+ ++ +A A RGGGG G ++ ++ +
Sbjct: 305 GRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRR 364
Query: 535 GQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRP 572
G+ AA + +G R GR +P
Sbjct: 365 GKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKP 402
Score = 48.5 bits (114), Expect = 4e-05
Identities = 104/472 (22%), Positives = 159/472 (33%), Gaps = 61/472 (12%)
Query: 126 RSREGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEAT 185
++ + A+ G G G++ K+R GK +R A G + R
Sbjct: 331 KATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDK---- 386
Query: 186 SNLCRARNEAFRLQLQRPQRPVGQTQ-ARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGL 244
L A+ + R Q P + Q A +PR G P + GG G
Sbjct: 387 KGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSG- 445
Query: 245 PSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQ 304
G +P RG++ + +EA ES + R+ A + S G +SH +
Sbjct: 446 ---GGKKPR-RRGQKARQKA-AEAGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLW 500
Query: 305 YEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSS 364
+ + A + Q + QK V+ S V G K
Sbjct: 501 RRGQKAEAAGEKATAAGAKSRGRKQPR-RQKPAVAGAKSRVGGS------------KSRQ 547
Query: 365 HTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAE 424
GA S G +SRG G W + A G P Q+ G+ +
Sbjct: 548 RQKAVAAGATSHGGGGN-KQSRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTK 606
Query: 425 HR-GREGEEGVRAGGGGTGE------------------------VRGGGSPGRQPVGR-- 457
R G G++ R GTG GS G+QP +
Sbjct: 607 SRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKP 666
Query: 458 -AAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRG 516
AA + + A A G+ A++ + P R + G VG+ R ++ R + RG
Sbjct: 667 AAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKK-PRLGKSRG 725
Query: 517 GGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 568
GGG A R G + R G ++ G++ A S G R + G
Sbjct: 726 GGG-------AKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG 770
Score = 41.2 bits (95), Expect = 0.006
Identities = 55/252 (21%), Positives = 89/252 (35%), Gaps = 30/252 (11%)
Query: 334 QKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRG-RGVTP 392
+K ++ V+G+ H+ K + N+G ++ A +S G RG P
Sbjct: 69 KKARLRGQKGAVAGKEARQHW-----QKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKP 123
Query: 393 RASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGR 452
R + A G Q+ +++RG ++ A G V+ G
Sbjct: 124 RRRGQKAAATGSKKPRWR----AQKSAAAGSKNRGAGAQKAAAAAG-----VKSQGGEKP 174
Query: 453 QPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFG-PRVGLRQHAERVERAQRA 511
Q A +G RGA+S + R E +FG R G R+ R + A
Sbjct: 175 QKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGG 234
Query: 512 AEGRGGGG--------------GGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQ 557
A+ R GGG GG R G ++R +G A G + +
Sbjct: 235 AKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAATA 294
Query: 558 GRNSQSRHQPGR 569
G ++ + GR
Sbjct: 295 GEKPAAKGRGGR 306
Score = 40.0 bits (92), Expect = 0.012
Identities = 52/205 (25%), Positives = 74/205 (36%), Gaps = 22/205 (10%)
Query: 372 GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGE 431
G + ++ R + G R SR L +G L G A GE
Sbjct: 241 GGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAAT----AGE 296
Query: 432 EGVRAGGGGTG-EVRGGGSP-----GRQPVGR---AAVTGEAGAGAAGRGAQSVRGPGVE 482
+ G GG G + GG +P G++P R A AG G G Q GV+
Sbjct: 297 KPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVK 356
Query: 483 RRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGV 542
R + + PR R + + A+ RGGG G +A RR G+ + RW+
Sbjct: 357 SRKKQRRRGKKPR--------RQKASAAGAKSRGGGDKKGL-REAKRRGDGRKKPRWQNP 407
Query: 543 GQAARGRRMAHHCSQGRNSQSRHQP 567
+ A+ A G R P
Sbjct: 408 RRRAQKAPAAKPRGGGSKKPRRRGP 432
Score = 40.0 bits (92), Expect = 0.012
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 388 RGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGG 447
RG PR SR G G R GG G++ GGGG RGG
Sbjct: 714 RGKKPRLGKSRGGGGAKSRGSGGAK---SRGSGGAKSRSGKKAAASKSHGGGGAKRRRGG 770
Query: 448 GSPGRQPVGRAAVT--GEAGAGAAGRGAQSVRGPG 480
G+ R G AVT G+ A A G+ V+ G
Sbjct: 771 GAKSRS--GEKAVTAGGQKAAAAGGKKPPRVKSRG 803
Score = 36.2 bits (82), Expect = 0.18
Identities = 47/173 (27%), Positives = 65/173 (37%), Gaps = 32/173 (18%)
Query: 373 ARSEERGARLAESRGRGVTPRASWSRQPAGGPLSS---------EGHLLPLVQR-----D 418
A +E+ A A SRG G + W + A G SS E P +R D
Sbjct: 641 AAAEKAWATGATSRGSG-GKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGD 699
Query: 419 GGGLA-------EHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGE-------- 463
GG A + RG++ G GGGG GG+ R G + +G+
Sbjct: 700 GGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSH 759
Query: 464 AGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLR--QHAERVERAQRAAEG 514
G GA R + E+ V G Q+ G + + R R Q+AA G
Sbjct: 760 GGGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAG 812
Score = 32.7 bits (73), Expect = 2.0
Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 27/123 (21%)
Query: 361 KPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGG 420
KP S GA+S RG+ A+SRG +GG S G + GG
Sbjct: 717 KPRLGKSRGGGGAKS--RGSGGAKSRG-------------SGGAKSRSGKKAAASKSHGG 761
Query: 421 GLAEHR------GREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQ 474
G A+ R R GE+ V AGG + + G++P R G G AA G +
Sbjct: 762 GGAKRRRGGGAKSRSGEKAVTAGG-----QKAAAAGGKKP-PRVKSRGGRGQKAAAGGKK 815
Query: 475 SVR 477
+R
Sbjct: 816 PLR 818
>gi|11386161 alpha 2 type IX collagen [Homo sapiens]
Length = 689
Score = 49.3 bits (116), Expect = 2e-05
Identities = 97/404 (24%), Positives = 141/404 (34%), Gaps = 73/404 (18%)
Query: 130 GASHGKG-SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNL 188
GAS +G GP G + R +P G + +G +G AIG G P + P
Sbjct: 217 GASGEQGIPGPPGPQGIRG-YPGMAGPKGETGPHGYKGMVGAIGATGPPGEEGPRGPPGR 275
Query: 189 CRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLP-SP 247
+ + ++ PQ G A G G+DG PGT G + G P SP
Sbjct: 276 AGEKGDEGSPGIRGPQGITGPKGATGPPGINGKDGTPGT-----PGMKGSAGQAGQPGSP 330
Query: 248 GHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYED 307
GH G+ + G + + E PQ P G S PG GE P+ +
Sbjct: 331 GHQGLAGVPGQPGTKGGPGD-QGEPGPQGLP-------GFSGPPGKEGEPGPRGE----- 377
Query: 308 NSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTS 367
+ PQ G+ GQ GD + +P
Sbjct: 378 ----------------IGPQ----------------GIMGQ-KGDQGERGPVGQPGPQ-- 402
Query: 368 LANQGARSEERGARLAESRG-RGVT-PRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEH 425
QG + E+ + +G GV + S + G + G ++ G +
Sbjct: 403 -GRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRGKVGDPGVAGLPGEKGEKGESGE 461
Query: 426 RGREGEEGVRAGGGGTGEVRGGGSPGRQ----PVGRAAVTGEAGA-GAAGRGAQSVRGPG 480
G +G++GVR G G G+PG Q P G + G G G GR G
Sbjct: 462 PGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLAGNRGVPGQPGR-------QG 514
Query: 481 VERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 524
VE R + Q V L+ E++ +A+ G G G
Sbjct: 515 VEGR--DATDQHIVDVALKMLQEQLAEVAVSAKREALGAVGMMG 556
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 48.9 bits (115), Expect = 3e-05
Identities = 58/277 (20%), Positives = 91/277 (32%), Gaps = 21/277 (7%)
Query: 329 QTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQG------ARSEERGARL 382
+++F+Q + A+ G L + T PS + + +G R R +
Sbjct: 374 RSRFEQFCHLRAIGDGEDEMLFTRRFVT-----PSEPVAHSRRGRLHLPRGRRSRRAVSV 428
Query: 383 AESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTG 442
S R + P + R PA P + + G E +G+E GG
Sbjct: 429 PASFFRRLAPSPARPRHPAEAPNNGARLSSEVSGSGSGNFGEEGNPQGKEDQEGSGGDYM 488
Query: 443 EVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHA 502
+ GS + G + G+ + G G G R +G+ G
Sbjct: 489 PMNNWGSGNGRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSN------GQGSGG 542
Query: 503 ERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQ 562
+ R + G G GGG H GQG G G + G+ S
Sbjct: 543 NQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPGDGHGSG-GGKNSGGGKGSGSGKGSD 601
Query: 563 SRHQPGRD---RPHHHHLELESLRERVPCEPPPPLPP 596
+ G+ R + L ++ P PPPP PP
Sbjct: 602 GDGERGKSLKKRSYFGKLTQSKQQQMPPPPPPPPPPP 638
Score = 36.6 bits (83), Expect = 0.14
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 212 ARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPARGRREPEAGESEARPE 271
A G++ + R P N ++ G G +PG P R + +AG + A
Sbjct: 1152 AAGFDSASARWFQPVANAADAEAVRGAQDVAGGSNPGAHNPSANLARGDNQAGGAAAAAA 1211
Query: 272 SPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQG 317
+P P RR+ R + ++H + DF DN D P +G
Sbjct: 1212 APEPPPRSRRVPRPPEREDSDNDDDTHVRMDFARRDN-QFDSPKRG 1256
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 48.9 bits (115), Expect = 3e-05
Identities = 40/120 (33%), Positives = 43/120 (35%), Gaps = 21/120 (17%)
Query: 416 QRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQS 475
Q GGG G G G GGGG G GG G G G G G GRG
Sbjct: 329 QEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQ 388
Query: 476 VRGP-----GVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRR 530
RG G R G + +G G G GGGGGGG G +RR
Sbjct: 389 GRGDYGGRGGYGGRGGYGGRGYGDPYG----------------GGGGGGGGGGGGGGYRR 432
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 48.1 bits (113), Expect = 5e-05
Identities = 92/363 (25%), Positives = 114/363 (31%), Gaps = 86/363 (23%)
Query: 137 SGPEGREATRARFPSPN--GKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNE 194
SGP+G SP G G L G A GL G P + P + + E
Sbjct: 920 SGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGE 979
Query: 195 AFR-----LQLQR-PQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPG 248
+ + L +R P P G G GRDG+PG+ D L G SPG
Sbjct: 980 SGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGS--DGLPGRDG--------SPG 1029
Query: 249 HTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDN 308
G+ + S P +P P P + GP+ G GES P
Sbjct: 1030 --------GKGDRGENGSPGAPGAPGHPGPPGPV---GPAGKSGDRGESGPAGP------ 1072
Query: 309 SDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSL 368
GA PA G G P
Sbjct: 1073 -------AGAPGPA---------------------GSRGA-------------PGPQGPR 1091
Query: 369 ANQGARSEERGARLAESRGRGVTPRASWSRQPAG--------GPLSSEGHLLPLVQRDGG 420
++G E A + RG P A S PAG GP G + P
Sbjct: 1092 GDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKD 1151
Query: 421 GLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPG 480
G + H G G G R G G G PG QP G G G G GA ++ G G
Sbjct: 1152 GTSGHPGPIGPPGPRGNRGERGSEGSPGHPG-QP-GPPGPPGAPGPCCGGVGAAAIAGIG 1209
Query: 481 VER 483
E+
Sbjct: 1210 GEK 1212
Score = 42.4 bits (98), Expect = 0.003
Identities = 47/170 (27%), Positives = 63/170 (37%), Gaps = 14/170 (8%)
Query: 138 GPEGREATRARFPSPNGKRRGSGKLWKRG--SFPAI-GLEGRPSLQSPEATSNLCRARNE 194
GP G P P G R +G+ + G P + G+ G P + ++ E
Sbjct: 504 GPAGERGA----PGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGE 559
Query: 195 AFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSP-GHTRPL 253
+ R P P GQ G+ G DG PG N + + GG G P G T P
Sbjct: 560 SGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGE--RGGPGGPGPQGPPGKNGETGPQ 617
Query: 254 PARGRREPEAGESEARPESPPQPQPRRRL-ARRGPSASPGSWGESHPQDD 302
G P + + PP PQ + L GP G GE P+ D
Sbjct: 618 GPPGPTGPGGDKGDT---GPPGPQGLQGLPGTGGPPGENGKPGEPGPKGD 664
Score = 41.2 bits (95), Expect = 0.006
Identities = 100/404 (24%), Positives = 129/404 (31%), Gaps = 83/404 (20%)
Query: 149 FPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVG 208
FP G R G+ ++G A GL+G L R + RP P G
Sbjct: 259 FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG--ERGRPGLP-G 315
Query: 209 QTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLP-SPGHTRPLPARGRREPEAGESE 267
ARG + G DG PG G + F G P + G P + G S
Sbjct: 316 AAGARGNDGARGSDGQPGP-----PGPPGTAGFPGSPGAKGEVGPAGSPG--------SN 362
Query: 268 ARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQ 327
P +P P+ +GP PG G +G PA +
Sbjct: 363 GAPGQRGEPGPQGHAGAQGPPGPPGING----------------SPGGKGEMGPAGIPGA 406
Query: 328 VQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEE--------RG 379
+ A ++G G G +P + + G R E G
Sbjct: 407 PGLMGARGPPGPAGANGAPGLRGG-------AGEPGKNGAKGEPGPRGERGEAGIPGVPG 459
Query: 380 ARLAESR-------GRGVTPRASWSRQPAG-----GPLSSEGHLLPLVQRDGGGLAEHRG 427
A+ + + G P A+ R G GP G P +R G A RG
Sbjct: 460 AKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRG 519
Query: 428 REGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGA-GAAGR-GAQSVRGPGVERRV 485
GE G GG G GSPG G G G+ G +GR G GP R
Sbjct: 520 AAGEPGRDGVPGGPGMRGMPGSPGGP--GSDGKPGPPGSQGESGRPGPPGPSGP----RG 573
Query: 486 AEGAQQF-GPRVGLRQHAERVERAQRAAEGRGG--GGGGGCGAQ 526
G F GP + A G+ G GG GG G Q
Sbjct: 574 QPGVMGFPGP------------KGNDGAPGKNGERGGPGGPGPQ 605
Score = 40.4 bits (93), Expect = 0.010
Identities = 96/394 (24%), Positives = 117/394 (29%), Gaps = 67/394 (17%)
Query: 136 GSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEA 195
GSGP G P P G + G+ G A G G L P ++ +
Sbjct: 847 GSGPAGP-------PGPQGVK---GERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPS 896
Query: 196 FRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHTRPLPA 255
P P G T A G +G GD G Q GS P PG PL
Sbjct: 897 GSPGKDGPPGPAGNTGAPGSPGVSGPKGDAG------QPGEKGSPGAQGP-PGAPGPLGI 949
Query: 256 RGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQDDPN 315
AG + AR + P P GP SPG G S + P
Sbjct: 950 -------AGITGARGLAGPPGMP-------GPRGSPGPQGVKGESGKPGANGLSGERGPP 995
Query: 316 QGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARS 375
LP + +A G G D P S +G R
Sbjct: 996 GPQGLPGLAG-------------TAGEPGRDGNPGSDGL-------PGRDGSPGGKGDRG 1035
Query: 376 EERGARLAESRGRG-----VTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREG 430
E + G V P + GP G P R G RG +G
Sbjct: 1036 ENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKG 1095
Query: 431 EEGVRAGGGGTGEVRGGGSPGRQ----PVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVA 486
E G R G G G+PG P G+ G G A RG GP + +
Sbjct: 1096 ETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGP-AGPRGPVGPSGPPGKDGTS 1154
Query: 487 EGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGG 520
GP R R +R +EG G G
Sbjct: 1155 GHPGPIGP------PGPRGNRGERGSEGSPGHPG 1182
Score = 39.7 bits (91), Expect = 0.016
Identities = 88/369 (23%), Positives = 109/369 (29%), Gaps = 80/369 (21%)
Query: 137 SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQS---PEATSNLCRARN 193
SGP G+ FP P G GK +RG G +G P P+
Sbjct: 569 SGPRGQPGVMG-FPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGG 627
Query: 194 EAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDV-LQSASGGSLFLGLPS----PG 248
+ PQ G G G+ G+PG D A GG G P PG
Sbjct: 628 DKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPG 687
Query: 249 HTRPLPARGRREP---EAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQY 305
RG P E G+ A P PP L +G G G P+
Sbjct: 688 LAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGL--QGMPGERGGLGSPGPKG---- 741
Query: 306 EDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSH 365
D + P + GV G+ P
Sbjct: 742 -DKGEPGGPG--------------------------ADGVPGK-----------DGPRGP 763
Query: 366 TSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEH 425
T + + G +G G P P G P G P G
Sbjct: 764 TGPIGPPGPAGQPG-----DKGEGGAPGLPGIAGPRGSP-GERGETGP---PGPAGFPGA 814
Query: 426 RGREGEEGVRAGGGGTGEVRGGGSPG----------RQPVGRAAVTGEAGA----GAAG- 470
G+ GE G + G GE GG PG P G V GE G+ GAAG
Sbjct: 815 PGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGF 874
Query: 471 RGAQSVRGP 479
GA+ + GP
Sbjct: 875 PGARGLPGP 883
Score = 37.4 bits (85), Expect = 0.081
Identities = 105/417 (25%), Positives = 132/417 (31%), Gaps = 64/417 (15%)
Query: 125 SRSREGASHGKGS-GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPE 183
+R +GA G GP G T A FP G + G GS A G G P Q
Sbjct: 319 ARGNDGARGSDGQPGPPGPPGT-AGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHA 377
Query: 184 ATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLG 243
Q P P G + G + G G PG A G G
Sbjct: 378 GA---------------QGPPGPPGINGSPGGKGEMGPAGIPG--------APGLMGARG 414
Query: 244 LPSPGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDF 303
P P P E G++ A+ E P PR G PG+ G
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGE----PGPRGERGEAGIPGVPGAKG-------- 462
Query: 304 QYEDNSDQDDPNQGA-FLPAVLHPQVQTQFDQKTQVSALSSGVSGQL--HGDHYYTFNIH 360
ED D GA LP + F + A +G+ G+ G+
Sbjct: 463 --EDGKDGSPGEPGANGLPGAAGERGAPGF----RGPAGPNGIPGEKGPAGER----GAP 512
Query: 361 KPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSS-----EGHLLPLV 415
P+ A + R G RG +P S G P S G P
Sbjct: 513 GPAGPRGAAGEPGRDGVPGG--PGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSG 570
Query: 416 QRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQ-PVGRAAVTGEAG-AGAAGRGA 473
R G+ G +G +G G GE G G PG Q P G+ TG G G G G
Sbjct: 571 PRGQPGVMGFPGPKGNDG---APGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGG 627
Query: 474 -QSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHR 529
+ GP + + GP + E + A G GG G GA R
Sbjct: 628 DKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPG-APGGKGDAGAPGER 683
Score = 32.0 bits (71), Expect = 3.4
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 137 SGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAF 196
SGP G++ T P P G G +RGS + G G+P P C A
Sbjct: 1145 SGPPGKDGTSGH-PGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAA 1203
Query: 197 RLQLQRPQRPVGQTQARGYEPRTGRDG-DPGTNWDVLQSA--SGGSLFLGLPSPGHTRPL 253
+ +G +A G+ P G + D N D + ++ S L SP +R
Sbjct: 1204 AI------AGIGGEKAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSRKN 1257
Query: 254 PARGRRE 260
PAR R+
Sbjct: 1258 PARNCRD 1264
Score = 30.4 bits (67), Expect = 9.9
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 420 GGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQ-PVGRAAVTGEAG----------AGA 468
GGLA + G G G G +G GSPG Q P G G +G +G
Sbjct: 167 GGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGP 226
Query: 469 AGRGAQSVRGPG 480
AG+ +S R PG
Sbjct: 227 AGKDGESGR-PG 237
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 47.8 bits (112), Expect = 6e-05
Identities = 95/390 (24%), Positives = 137/390 (35%), Gaps = 66/390 (16%)
Query: 140 EGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQ 199
+GR A+ R P+ N +RRG RG+ + + P +S R R + + L+
Sbjct: 2087 QGRAASMPRLPAENQRRRGR----PRGNNLSTISDTSPMKRSASVLGPKAR-RLDDYSLE 2141
Query: 200 LQRPQRPVGQTQA------RGYEPRTGR--DGDPGTNWDVLQSASGGSL-------FLGL 244
P+ Q R E GR D D G D+ + G L G
Sbjct: 2142 RVPPEENQRHHQRRRDRSHRASERSLGRYTDVDTGLGTDLSMTTQSGDLPSKERDQERGR 2201
Query: 245 PSP------------GHTRPLPARGR---REPEAGESEARPE--SPPQPQPRRRLARRGP 287
P H P P + R P+ G + AR + S + R +A R
Sbjct: 2202 PKDRKHRQHHHHHHHHHHPPPPDKDRYAQERPDHGRARARDQRWSRSPSEGREHMAHRQG 2261
Query: 288 SAS------PGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLH------PQVQTQFDQK 335
S+S P + G S P+ + + ++ P + PQ Q Q Q+
Sbjct: 2262 SSSVSGSPAPSTSGTSTPRRGRRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQQQQQQQQQ 2321
Query: 336 TQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQGARS--EERGARLAESRGRGVTPR 393
Q A++ G Y +P + G S R R R +PR
Sbjct: 2322 QQQQAVARPGRAATSGPRRYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPR 2381
Query: 394 A---SWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSP 450
A +R PA GP SEG P R G +RG + +E G GG E G
Sbjct: 2382 ACRHGGARWPASGPHVSEG---PPGPRHHG---YYRGSDYDEADGPGSGGGEEAMAGAYD 2435
Query: 451 GRQPVGRAAVTGEAGAGAAGRGAQSVRGPG 480
PV A+ +GA GR ++ R G
Sbjct: 2436 APPPVRHAS------SGATGRSPRTPRASG 2459
Score = 37.0 bits (84), Expect = 0.11
Identities = 51/198 (25%), Positives = 72/198 (36%), Gaps = 17/198 (8%)
Query: 361 KPSSHTSLANQGARSEERGARLAESRGRGVTPRASW-SRQPAGGPLSSEGHLLPLVQRDG 419
+P+ L Q A R R R + A +R+P G +E + R+G
Sbjct: 842 EPTVDQRLGQQRAEDFLRKQARYHDRARDPSGSAGLDARRPWAGSQEAE------LSREG 895
Query: 420 --GGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVR 477
G ++H REG G E G P R+ V R + E+ +G+ GA
Sbjct: 896 PYGRESDHHAREGSLEQPGFWEGEAERGKAGDPHRRHVHRQGGSRESRSGSPRTGAD--- 952
Query: 478 GPGVERRVAEGAQQFGPRVGLRQHAERVE--RAQRAAEGRGGGGGGGCGAQAHRR---VV 532
G R + GP + A E R R EG G G GG + HR
Sbjct: 953 GEHRRHRAHRRPGEEGPEDKAERRARHREGSRPARGGEGEGEGPDGGERRRRHRHGAPAT 1012
Query: 533 GQGQVRWEGVGQAARGRR 550
+G R E + R R+
Sbjct: 1013 YEGDARREDKERRHRRRK 1030
Score = 35.4 bits (80), Expect = 0.31
Identities = 61/260 (23%), Positives = 83/260 (31%), Gaps = 38/260 (14%)
Query: 211 QARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLPSPGHT-RPLPARGRREPEAGESEAR 269
+AR + R R P + + G S G P+P + P RGRR+ S R
Sbjct: 2237 RARARDQRWSRS--PSEGREHMAHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPSTPR 2294
Query: 270 PE-------------SPPQPQPRR-------------RLARRGPSASPGSWGESHPQDDF 303
P PPQ Q ++ R A GP PG E D
Sbjct: 2295 PHVSYSPVIRKAGGSGPPQQQQQQQQQQQQQAVARPGRAATSGPRRYPGPTAEPLAGDRP 2354
Query: 304 QYEDNSDQDDPNQGAFLPAVLH---PQVQTQFDQKTQVSA--LSSGVSGQLHGDHYYTFN 358
+S P +P P+ + S +S G G H +Y +
Sbjct: 2355 PTGGHSSGRSPRMERRVPGPARSESPRACRHGGARWPASGPHVSEGPPGPRHHGYYRGSD 2414
Query: 359 IHKPSSHTSLANQ----GARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPL 414
+ S + GA R A S G +PR + PA S G LP
Sbjct: 2415 YDEADGPGSGGGEEAMAGAYDAPPPVRHASSGATGRSPRTPRASGPACASPSRHGRRLPN 2474
Query: 415 VQRDGGGLAEHRGREGEEGV 434
GLA RG +G+
Sbjct: 2475 GYYPAHGLARPRGPGSRKGL 2494
Score = 31.2 bits (69), Expect = 5.8
Identities = 59/248 (23%), Positives = 84/248 (33%), Gaps = 43/248 (17%)
Query: 368 LANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLL--PLVQRDGGG---- 421
+A++ S G+ + G TPR RQ P + H+ P++++ GG
Sbjct: 2256 MAHRQGSSSVSGSPAPSTSGTS-TPRRG-RRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQ 2313
Query: 422 --LAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGP 479
+ + ++ + R G T R P +P+ AG G S R P
Sbjct: 2314 QQQQQQQQQQQQAVARPGRAATSGPRRYPGPTAEPL--------AGDRPPTGGHSSGRSP 2365
Query: 480 GVERRVAEGAQQFGPRV--------------------GLRQHAERVERAQRAAEGRGGGG 519
+ERRV A+ PR G R H A+G G GG
Sbjct: 2366 RMERRVPGPARSESPRACRHGGARWPASGPHVSEGPPGPRHHGYYRGSDYDEADGPGSGG 2425
Query: 520 GGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLEL 579
G A A+ VR G R R S SRH GR P+ ++
Sbjct: 2426 GEEAMAGAYD---APPPVRHASSGATGRSPRTPRASGPACASPSRH--GRRLPNGYYPAH 2480
Query: 580 ESLRERVP 587
R R P
Sbjct: 2481 GLARPRGP 2488
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 47.4 bits (111), Expect = 8e-05
Identities = 98/423 (23%), Positives = 128/423 (30%), Gaps = 85/423 (20%)
Query: 128 REGASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSN 187
R G G G + R P P G +G ++G GL G P + +
Sbjct: 779 RGGIGEKGAEGTAGNDGARG-LPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRG 837
Query: 188 LCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNW-------------DVLQS 234
+ PQ P GQ +G G+ GD G+ + +
Sbjct: 838 ---ENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPG 894
Query: 235 ASGGSLFLGLP-------SPGHTRPLPARGRREPEAGESEARPESPP----QPQPRRRLA 283
GG G P S G P G P E E PP P R+
Sbjct: 895 LKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVG 954
Query: 284 RRGPSASPGSWGESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSS 343
RGP+ PG G+ ED D G +
Sbjct: 955 DRGPAGPPGGPGDKGDPG----EDGQPGPDGPPG------------------------PA 986
Query: 344 GVSGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRGR--GVTPRASWSRQPA 401
G +GQ + G R E L G V P + +
Sbjct: 987 GTTGQ----------------RGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGP 1030
Query: 402 GGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVT 461
GP+ G P+ + G A + G G +G G G+ G PG Q G
Sbjct: 1031 PGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQ--GAPGTP 1088
Query: 462 GEAGA-GAAG-RGAQSVRGP-----GVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEG 514
G GA G AG RG RGP +R G Q GPR H +R +R Q+ G
Sbjct: 1089 GPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQ--GPRGDKGDHGDRGDRGQKGHRG 1146
Query: 515 RGG 517
G
Sbjct: 1147 FTG 1149
Score = 45.1 bits (105), Expect = 4e-04
Identities = 100/420 (23%), Positives = 134/420 (31%), Gaps = 65/420 (15%)
Query: 126 RSREGASHGKGS-GPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEA 184
R R G + GS GP G + R P P G + G+ G A G G PS P+
Sbjct: 128 RGRPGPAGPPGSQGPRGERGPKGR-PGPRGPQGIDGEPGVPGQPGAPGPPGHPSHPGPDG 186
Query: 185 TSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGL 244
S RP Q G + ++G G
Sbjct: 187 LS------------------RPFS-AQMAGLDEKSGLGSQVGL----------------- 210
Query: 245 PSPGHTRPLPARGRREPEAGESEARPESPP----QPQPRRRLARRGPSASPGSWGE-SHP 299
PG P+ RG + + + A P PP P P + RGP PG GE P
Sbjct: 211 -MPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEP 269
Query: 300 QDDFQYEDNSDQDDPNQGAF-----LPAVL-HPQVQTQFDQKTQVSALSS----GVSGQL 349
+ + P F LP + H + K +V A S G +G +
Sbjct: 270 GRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPM 329
Query: 350 HGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEG 409
G P L QGA +RGA + + P G +G
Sbjct: 330 -GAMGPLGPRGMPGERGRLGPQGAPG-QRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKG 387
Query: 410 HLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPG-RQPVGRAAVTGEAG-AG 467
P R G RG G G G G + G+PG + P G +G G AG
Sbjct: 388 EAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAG 447
Query: 468 AAG-------RGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGG 520
G G Q +RG + V + GP+ H + EG+ G G
Sbjct: 448 PPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRG 507
Score = 42.7 bits (99), Expect = 0.002
Identities = 92/379 (24%), Positives = 122/379 (32%), Gaps = 66/379 (17%)
Query: 138 GPEGREATRARFPS--PNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEA 195
GP+G + R S P G + G+ + G A GL G P +Q PE A E
Sbjct: 537 GPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGED 596
Query: 196 FRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSASGGSLFLGLP----SPGHTR 251
R P G RG G G G++ D + G+ G+P +PG
Sbjct: 597 GR------PGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGN--AGVPGQRGAPGKDG 648
Query: 252 PLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSASPGSWGESHPQDDFQYEDNSDQ 311
+ G P E + PP P + L GP PG G+ DQ
Sbjct: 649 EVGPSGPVGPPGLAGERGEQGPPGPTGFQGLP--GPPGPPGEGGKP-----------GDQ 695
Query: 312 DDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGVSGQLHGDHYYTFNIHKPSSHTSLANQ 371
P P + P + + ++ G++G L G+ H P
Sbjct: 696 GVPGD----PGAVGP-LGPRGERGNPGERGEPGITG-LPGEKGMAGG-HGPDGPKGSPGP 748
Query: 372 GARSEERG----ARLAESRGRGVTPRASWSRQPAG-----------------GPLSSEGH 410
+ G + RG TP R G GPL G
Sbjct: 749 SGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGP 808
Query: 411 LLPLVQR---DGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAG-- 465
P ++ GL G G G R G TG V G G P G+ V GE G
Sbjct: 809 AGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQG--PDGQPGVKGEPGEP 866
Query: 466 ---AGAAGRGAQSVRG-PG 480
A G Q + G PG
Sbjct: 867 GQKGDAGSPGPQGLAGSPG 885
Score = 41.2 bits (95), Expect = 0.006
Identities = 95/394 (24%), Positives = 123/394 (31%), Gaps = 88/394 (22%)
Query: 123 HQSRSREGASHGKGS-GPEGR-----EATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGR 176
H G G+G+ GP G A R P P G +G L + G EG
Sbjct: 887 HGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGK------EGP 940
Query: 177 PSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQTQARGYEPRTGRDGDPGTNWDVLQSAS 236
P L+ + R A P G G + + G DG PG +
Sbjct: 941 PGLRGDPGSHGRVGDRGPA------GPPGGPGDKGDPGEDGQPGPDGPPGP-----AGTT 989
Query: 237 GGSLFLGLPS-------PGHTRPLPARGRREPEAGESEARPESPPQPQPRRRLARRGPSA 289
G +G+P PG P G+ P + P P P GP
Sbjct: 990 GQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPP-----GSNGPVG 1044
Query: 290 SPGSWG----ESHPQDDFQYEDNSDQDDPNQGAFLPAVLHPQVQTQFDQKTQVSALSSGV 345
PG G + P D + D+ DP A LP +Q T + G
Sbjct: 1045 EPGPEGPAGNDGTPGRDGAVGERGDRGDPGP-AGLPG-------SQGAPGTPGPVGAPGD 1096
Query: 346 SGQLHGDHYYTFNIHKPSSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPL 405
+GQ GD P S + G R+ +RG GP
Sbjct: 1097 AGQ-RGD---------PGSRGPIGPPG-RAGKRGLP---------------------GPQ 1124
Query: 406 SSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPG----RQPVGRAAVT 461
G R G HRG G +G+ G GE G PG R P G +
Sbjct: 1125 GPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPS 1184
Query: 462 GEAG-AGAAGRGAQSVRGPGVERRVAEGAQQFGP 494
G+ G G G + PGV V E + P
Sbjct: 1185 GKEGNPGPLG----PIGPPGVRGSVGEAGPEGPP 1214
Score = 32.7 bits (73), Expect = 2.0
Identities = 39/160 (24%), Positives = 53/160 (33%), Gaps = 16/160 (10%)
Query: 150 PSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLCRARNEAFRLQLQRPQRPVGQ 209
P P G R G G+ G+ G G P P + + E L P G
Sbjct: 773 PGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGN 832
Query: 210 TQARGYEPRTGR---------DGDPGTNWDVLQSASGGSLFLGLPSP----GHTRPLPAR 256
+RG TG DG PG + + G G P P G P
Sbjct: 833 PGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGD--AGSPGPQGLAGSPGPHGPN 890
Query: 257 GRREPEAGE-SEARPESPPQPQPRRRLARRGPSASPGSWG 295
G + G ++ P + P R+ GP+ +PG G
Sbjct: 891 GVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAG 930
Score = 31.2 bits (69), Expect = 5.8
Identities = 34/126 (26%), Positives = 42/126 (33%), Gaps = 3/126 (2%)
Query: 403 GPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTG 462
GP G P+ G G+ GE+G G GEV GSPG + G G
Sbjct: 237 GPPGEPGDPGPMGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGAR--GFPGAPG 294
Query: 463 EAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGG 522
G RG + + GP E + GP + R GR G G
Sbjct: 295 LPGL-KGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAP 353
Query: 523 CGAQAH 528
AH
Sbjct: 354 GQRGAH 359
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 47.4 bits (111), Expect = 8e-05
Identities = 63/252 (25%), Positives = 87/252 (34%), Gaps = 30/252 (11%)
Query: 363 SSHTSLANQGARSEERGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGL 422
S+H SL A +G G A Q G L S GH L + L
Sbjct: 6 SNHYSLLTSSASIVHAEPPGGMQQGAGGYREAQSLVQGDYGALQSNGHPLSHAHQWITAL 65
Query: 423 AEHRGREGEEGVRAGGGGTGEVRGGGSP-GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGV 481
+ H G G G GGGG G G GSP P+G+ + GRG + GPG
Sbjct: 66 S-HGGGGGGGGGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQGGRG-DELHGPGA 123
Query: 482 ERRVAEGAQQFGPRVGLRQHAERVER-----AQRAAEGRGGGGGGGCGAQAHRRVVGQG- 535
++ + QQ + +Q ++ ++ AA G G A A G
Sbjct: 124 LQQQHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGA 183
Query: 536 --------QVRWEGVGQAARGRRMA---HHCSQGRNSQSRHQPGRDRPHHHHLELESLRE 584
Q + G G + A HH + + + H PH H +
Sbjct: 184 SNGGLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQ------ 237
Query: 585 RVPCEPPPPLPP 596
+PPPP PP
Sbjct: 238 ----QPPPPPPP 245
Score = 37.7 bits (86), Expect = 0.062
Identities = 47/198 (23%), Positives = 67/198 (33%), Gaps = 20/198 (10%)
Query: 130 GASHGKGSGPEGREATRARFPSPNGKRRGSGKLWKRGSFPAIGLEGRPSLQSPEATSNLC 189
G G G G +G + + P+ K + RG L G +LQ
Sbjct: 79 GGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQGGRGD----ELHGPGALQQQHQQQQQQ 134
Query: 190 RARNEAFRLQLQRPQRPVGQTQ-ARGYEPRTG--RDGDPGTNWDVLQSASGGSLFLGLPS 246
+ + + + Q Q+ QRP A + P G R + AS G L PS
Sbjct: 135 QQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNGGLLYSQPS 194
Query: 247 ---------PGHTRPLPARGRR----EPEAGESEARPESPPQPQPRRRLARRGPSASPGS 293
G L G R EP + P S P QP +GP PG+
Sbjct: 195 FTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGA 254
Query: 294 WGESHPQDDFQYEDNSDQ 311
+ H +D D+ +Q
Sbjct: 255 HHDPHSDEDTPTSDDLEQ 272
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 47.0 bits (110), Expect = 1e-04
Identities = 53/156 (33%), Positives = 63/156 (40%), Gaps = 18/156 (11%)
Query: 382 LAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEE--GVRAGGG 439
L E G+G R S + +G GH + RD GG +RG+EG G AG G
Sbjct: 228 LLEVEGQGGRGRPGQSLRRSG-----RGHGRGIQARDTGGGPRNRGQEGTHASGRHAGEG 282
Query: 440 GTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQS-VRGPGV----ERR----VAEGAQ 490
G R PV G A +GA VRG V ERR E A+
Sbjct: 283 APHGKLAGVQEERVPVEELLARQARGEAEARQGALGQVRGGRVRLHRERREGLLARERAR 342
Query: 491 QF--GPRVGLRQHAERVERAQRAAEGRGGGGGGGCG 524
F G R L A + RAQ A+ GR GGG G
Sbjct: 343 LFHLGRRCALANRAPALLRAQAASAGRDGGGAMASG 378
Score = 42.7 bits (99), Expect = 0.002
Identities = 53/182 (29%), Positives = 68/182 (37%), Gaps = 27/182 (14%)
Query: 425 HRGREGEEGVRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGR----GAQSVRGPG 480
HRGR G +G G R GG G + G GA + G Q G
Sbjct: 128 HRGRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVA 187
Query: 481 VER----RVAEGAQQFGPRVGLRQHAERVERAQR--------AAEGRGGGGGGGCGAQAH 528
V R R G + RVG+R+ A Q EG+GG G G +
Sbjct: 188 VHRAGGCRRGGGRRCGHVRVGVREQASERGHGQALGGQDVLLEVEGQGGRGRPGQSLRRS 247
Query: 529 RRVVGQG-QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPGRDRPHHHHLELESLRERVP 587
R G+G Q R G G RG+ +G ++ RH G PH ++ ERVP
Sbjct: 248 GRGHGRGIQARDTGGGPRNRGQ-------EGTHASGRH-AGEGAPHGKLAGVQ--EERVP 297
Query: 588 CE 589
E
Sbjct: 298 VE 299
Score = 35.4 bits (80), Expect = 0.31
Identities = 44/154 (28%), Positives = 56/154 (36%), Gaps = 21/154 (13%)
Query: 434 VRAGGGGTGEVRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQ-- 491
+RA G G GG G RA V G G +V+GP R +G +
Sbjct: 99 LRAEFGRQGHGAGGERGGAAVEFRARVHCHRGRAGGQGGDFAVQGPRGRRHGGQGGGEQT 158
Query: 492 ----------FGPRVGLRQHAERVER--AQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRW 539
G R H ++E A A G GGG CG H RV + Q
Sbjct: 159 AAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRRCG---HVRVGVREQASE 215
Query: 540 EGVGQAARGR----RMAHHCSQGRNSQSRHQPGR 569
G GQA G+ + +GR QS + GR
Sbjct: 216 RGHGQALGGQDVLLEVEGQGGRGRPGQSLRRSGR 249
Score = 31.2 bits (69), Expect = 5.8
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 15/126 (11%)
Query: 464 AGAGAAGRGAQSVR-GPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGG 522
+G G GR A VR G + + Q G R+ LR R G GG GG
Sbjct: 64 SGTGLRGRAAGPVRLGFQAANQPLDALQFAGGRLFLRAEFGR------QGHGAGGERGGA 117
Query: 523 CGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS-----RHQPGRD---RPHH 574
R +G+ +G A +G R H QG Q+ RH+ G +P
Sbjct: 118 AVEFRARVHCHRGRAGGQGGDFAVQGPRGRRHGGQGGGEQTAAVRDRHRDGVGAVAQPRA 177
Query: 575 HHLELE 580
H +++E
Sbjct: 178 HGVQIE 183
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 46.2 bits (108), Expect = 2e-04
Identities = 49/143 (34%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 400 PAGGPLSSEGHLLPLVQRDGGGLAE-HRGREGEEGVRAGGGG--TGEVRGGGSPGRQPVG 456
P GG +S GH + GGG+ HR EG G GGGG E GGG G G
Sbjct: 757 PGGGMGNSSGHRPH--EGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGS--G 812
Query: 457 RAAVTGEAGAGAAGRGAQSVRGPGVE------RRVAEGAQQFGPR-------VGLRQHAE 503
G G AG G + GPG R EG GP G R H
Sbjct: 813 HRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDH 872
Query: 504 R--VERAQRAAEGRGGGGGGGCG 524
R R +G G GGGG G
Sbjct: 873 RGPPPHEHRGHDGPGHGGGGHRG 895
Score = 40.4 bits (93), Expect = 0.010
Identities = 48/163 (29%), Positives = 53/163 (32%), Gaps = 36/163 (22%)
Query: 417 RDGGGLAEHRGREGEEGVRAGGGGTGEVRGGG---SPGRQPVGRAAVTGEAGAGAAGRGA 473
R GGG RG G V GG E GGG S G +P E G G G
Sbjct: 729 RSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRP-------HEGPGGGMGSGH 781
Query: 474 QSVRGPGVERRVAEGAQQFGPRVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVG 533
+ GPG G G R H EG GGG GG G + H
Sbjct: 782 RPHEGPG---------GSMGGGGGHRPH-----------EGPGGGISGGSGHRPH----- 816
Query: 534 QGQVRWEGVGQAARGRRMAHHCSQGRNSQSRHQ-PGRDRPHHH 575
+G G G R G H+ PG PH H
Sbjct: 817 EGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGH 859
Score = 36.2 bits (82), Expect = 0.18
Identities = 71/261 (27%), Positives = 86/261 (32%), Gaps = 71/261 (27%)
Query: 347 GQLHGDHYYTFNIHKPSSHTS--LANQGARSEERGARLAESRGRGVTPRASWSRQPAGGP 404
G ++ T + P+SH S L Q S++ L G P A+ P GGP
Sbjct: 577 GGINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPIANGF--PPGGP 634
Query: 405 LSSEG--HLLPLVQRDGGGL-AEHRGREGEEGVRAGG------GGT------------GE 443
+G H P GG + H G G G R G GG G
Sbjct: 635 GGPKGMQHFPP---GPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGP 691
Query: 444 VRGGGSPGRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGPRVGLRQHAE 503
+RGG PG P R G GRG P R A G + G
Sbjct: 692 MRGGPGPGPGPYHR---------GRGGRGGNEPPPPPPPFRGARGGRSGGG--------- 733
Query: 504 RVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHHCSQGRNSQS 563
GRGG GGG G HR G G G+G ++ R H G S
Sbjct: 734 -------PPNGRGGPGGGMVGGGGHRPHEGPG----GGMGNSSGHR---PHEGPGGGMGS 779
Query: 564 RHQP-----------GRDRPH 573
H+P G RPH
Sbjct: 780 GHRPHEGPGGSMGGGGGHRPH 800
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,861,203
Number of Sequences: 37866
Number of extensions: 3449685
Number of successful extensions: 29524
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 795
Number of HSP's that attempted gapping in prelim test: 21156
Number of HSP's gapped (non-prelim): 7217
length of query: 1128
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1015
effective length of database: 13,968,660
effective search space: 14178189900
effective search space used: 14178189900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.