Guide to the Human Genome
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Name: LOC645529 Sequence: fasta or formatted (299aa) NCBI GI: 169163744
Description:

PREDICTED: similar to ACR

Referenced in:

Serine Proteases
Testes and Sperm

Other entries for this name:
alt prot [355aa] PREDICTED: similar to Putative acrosin-like protease
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         26           3
 C cysteine            3.3         10           1
 D aspartate           3.3         10           1
 E glutamate           3.0          9           2
 F phenylalanine       1.3          4           1
 G glycine             8.0         24           2
 H histidine           1.3          4           1
 I isoleucine          3.7         11           1
 K lysine              2.0          6           1
 L leucine             7.0         21           2
 M methionine          2.0          6           1
 N asparagine          1.7          5           1
 P proline            12.7         38           4
 Q glutamine           4.7         14           2
 R arginine            7.7         23           2
 S serine              8.7         26           2
 T threonine           5.4         16           2
 V valine              7.0         21           3
 W tryptophan          3.3         10           2
 X unknown             2.3          7           7
 Y tyrosine            2.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to ACR 
LOC645529             0.956   PREDICTED: similar to Putative acrosin-like proteas...
ACR                   0.535   acrosin precursor 
HPN                   0.133   hepsin 
HPN                   0.133   hepsin 
TMPRSS11A             0.125   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.125   transmembrane protease, serine 11A isoform 1 
TMPRSS9               0.123   transmembrane protease, serine 9 
PLG                   0.120   plasminogen 
TMPRSS11F             0.120   transmembrane protease, serine 11F 
TMPRSS11E             0.120   transmembrane protease, serine 11E 
TMPRSS11E2            0.120   transmembrane protease, serine 11E2 
TMPRSS4               0.116   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.116   transmembrane protease, serine 4 isoform 1 
TMPRSS3               0.116   transmembrane protease, serine 3 isoform 1 
HABP2                 0.114   hyaluronan binding protein 2 preproprotein 
TMPRSS11B             0.113   transmembrane protease, serine 11B 
TMPRSS13              0.113   transmembrane protease, serine 13 
TMPRSS2               0.111   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.111   transmembrane protease, serine 2 isoform 2 
TMPRSS5               0.111   transmembrane protease, serine 5 
TMPRSS11D             0.108   transmembrane protease, serine 11D 
HGFAC                 0.106   HGF activator preproprotein 
OVCH1                 0.106   ovochymase 1 
F12                   0.103   coagulation factor XII precursor 
PRSS33                0.103   protease, serine, 33 
LOC100289195          0.099   PREDICTED: hypothetical protein XP_002342719 
KLKB1                 0.099   plasma kallikrein B1 precursor 
PRSS8                 0.099   prostasin preproprotein 
F11                   0.098   coagulation factor XI precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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