Guide to the Human Genome
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Name: F11 Sequence: fasta or formatted (625aa) NCBI GI: 4503627
Description:

coagulation factor XI precursor

Referenced in:

Coagulation
Platelets and Megakaryocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         30           2
 C cysteine            5.8         36           1
 D aspartate           4.5         28           2
 E glutamate           5.0         31           2
 F phenylalanine       4.6         29           2
 G glycine             6.9         43           2
 H histidine           3.5         22           2
 I isoleucine          6.1         38           3
 K lysine              6.6         41           2
 L leucine             7.4         46           2
 M methionine          1.0          6           1
 N asparagine          3.4         21           1
 P proline             3.8         24           1
 Q glutamine           4.3         27           1
 R arginine            4.6         29           1
 S serine              8.2         51           2
 T threonine           8.5         53           2
 V valine              6.1         38           2
 W tryptophan          1.6         10           1
 Y tyrosine            3.5         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor XI precursor 
KLKB1                 0.595   plasma kallikrein B1 precursor 
TMPRSS2               0.138   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.138   transmembrane protease, serine 2 isoform 2 
TMPRSS13              0.136   transmembrane protease, serine 13 
TMPRSS5               0.133   transmembrane protease, serine 5 
PRSS7                 0.132   enterokinase precursor 
PRSS8                 0.131   prostasin preproprotein 
TMPRSS6               0.129   transmembrane protease, serine 6 
TMPRSS3               0.128   transmembrane protease, serine 3 isoform 1 
HPN                   0.125   hepsin 
HPN                   0.125   hepsin 
PRSS27                0.125   marapsin 
TMPRSS11D             0.123   transmembrane protease, serine 11D 
TMPRSS11F             0.123   transmembrane protease, serine 11F 
UNQ9391               0.122   hypothetical protein LOC203074 
PRSS21                0.122   testisin isoform 1 
PRSS21                0.122   testisin isoform 2 
TPSAB1                0.122   tryptase alpha/beta 1 precursor 
PRSS22                0.122   protease, serine, 22 
MPN2                  0.121   marapsin 2 
TMPRSS7               0.120   transmembrane protease, serine 7 
CORIN                 0.119   corin 
TPSB2                 0.119   tryptase beta 2 precursor 
PRSS12                0.119   neurotrypsin precursor 
ST14                  0.117   matriptase 
PRSS33                0.117   protease, serine, 33 
TPSG1                 0.115   transmembrane tryptase preproprotein 
TMPRSS11A             0.115   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.115   transmembrane protease, serine 11A isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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