Guide to the Human Genome
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Name: TMPRSS4 Sequence: fasta or formatted (437aa) NCBI GI: 15451940
Description:

transmembrane protease, serine 4 isoform 1

Referenced in:

Serine Proteases

Other entries for this name:
alt prot [432aa] transmembrane protease, serine 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         25           2
 C cysteine            3.7         16           1
 D aspartate           6.6         29           2
 E glutamate           4.8         21           2
 F phenylalanine       3.9         17           2
 G glycine             8.0         35           2
 H histidine           1.8          8           1
 I isoleucine          6.4         28           4
 K lysine              5.3         23           1
 L leucine             9.2         40           2
 M methionine          2.3         10           2
 N asparagine          2.7         12           1
 P proline             6.6         29           1
 Q glutamine           4.3         19           1
 R arginine            3.4         15           1
 S serine              7.8         34           2
 T threonine           4.6         20           1
 V valine              7.8         34           3
 W tryptophan          2.5         11           1
 Y tyrosine            2.5         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protease, serine 4 isoform 1 
TMPRSS4               0.981   transmembrane protease, serine 4 isoform 3 
TMPRSS13              0.269   transmembrane protease, serine 13 
TMPRSS2               0.256   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.256   transmembrane protease, serine 2 isoform 2 
TMPRSS3               0.246   transmembrane protease, serine 3 isoform 1 
TMPRSS5               0.220   transmembrane protease, serine 5 
HPN                   0.219   hepsin 
HPN                   0.219   hepsin 
PRSS7                 0.215   enterokinase precursor 
TMPRSS11D             0.208   transmembrane protease, serine 11D 
TMPRSS6               0.191   transmembrane protease, serine 6 
KLKB1                 0.184   plasma kallikrein B1 precursor 
TMPRSS11F             0.183   transmembrane protease, serine 11F 
TMPRSS11B             0.183   transmembrane protease, serine 11B 
ACR                   0.181   acrosin precursor 
TMPRSS11E             0.180   transmembrane protease, serine 11E 
TMPRSS11E2            0.180   transmembrane protease, serine 11E2 
PRSS33                0.179   protease, serine, 33 
TESSP1                0.177   testis-specific serine protease 1 
TPSG1                 0.177   transmembrane tryptase preproprotein 
PRSS21                0.177   testisin isoform 1 
PRSS21                0.175   testisin isoform 2 
PRSS27                0.174   marapsin 
TMPRSS9               0.173   transmembrane protease, serine 9 
PRSS22                0.173   protease, serine, 22 
CORIN                 0.169   corin 
TMPRSS11A             0.168   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.168   transmembrane protease, serine 11A isoform 1 
TMPRSS7               0.166   transmembrane protease, serine 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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