Guide to the Human Genome
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Name: OVCH1 Sequence: fasta or formatted (1134aa) NCBI GI: 110815798
Description:

ovochymase 1

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         61           2
 C cysteine            3.3         37           2
 D aspartate           4.1         46           2
 E glutamate           5.1         58           2
 F phenylalanine       3.7         42           2
 G glycine             8.3         94           3
 H histidine           2.9         33           2
 I isoleucine          6.3         71           2
 K lysine              6.1         69           2
 L leucine             9.5        108           5
 M methionine          2.3         26           1
 N asparagine          3.8         43           2
 P proline             5.9         67           3
 Q glutamine           3.6         41           2
 R arginine            4.7         53           2
 S serine              9.9        112           3
 T threonine           4.3         49           2
 V valine              6.7         76           2
 W tryptophan          1.8         20           1
 Y tyrosine            2.5         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ovochymase 1 
OVCH2                 0.127   ovochymase 2 
ST14                  0.072   matriptase 
TMPRSS11E2            0.071   transmembrane protease, serine 11E2 
TMPRSS9               0.071   transmembrane protease, serine 9 
TMPRSS2               0.071   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.071   transmembrane protease, serine 2 isoform 2 
TMPRSS11E             0.070   transmembrane protease, serine 11E 
TMPRSS3               0.068   transmembrane protease, serine 3 isoform 1 
TMPRSS11D             0.068   transmembrane protease, serine 11D 
TMPRSS7               0.067   transmembrane protease, serine 7 
PLG                   0.067   plasminogen 
TMPRSS11B             0.067   transmembrane protease, serine 11B 
TMPRSS6               0.067   transmembrane protease, serine 6 
LPA                   0.067   lipoprotein Lp(a) precursor 
PRSS7                 0.066   enterokinase precursor 
PRSS8                 0.066   prostasin preproprotein 
KLKB1                 0.065   plasma kallikrein B1 precursor 
TPSAB1                0.065   tryptase alpha/beta 1 precursor 
TMPRSS11F             0.064   transmembrane protease, serine 11F 
HPN                   0.064   hepsin 
HPN                   0.064   hepsin 
TMPRSS4               0.063   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.063   transmembrane protease, serine 4 isoform 1 
TPSB2                 0.063   tryptase beta 2 precursor 
CTRL                  0.063   chymotrypsin-like 
ACR                   0.063   acrosin precursor 
CTRC                  0.062   chymotrypsin C preproprotein 
PRSS36                0.061   protease, serine, 36 
CELA2A                0.061   elastase 2A preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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