Guide to the Human Genome
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Name: TMPRSS11A Sequence: fasta or formatted (421aa) NCBI GI: 167466250
Description:

transmembrane protease, serine 11A isoform 1

Referenced in:

Serine Proteases

Other entries for this name:
alt prot [418aa] transmembrane protease, serine 11A isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         26           2
 C cysteine            1.9          8           1
 D aspartate           5.0         21           2
 E glutamate           3.6         15           2
 F phenylalanine       3.6         15           1
 G glycine             6.4         27           2
 H histidine           1.7          7           1
 I isoleucine          7.6         32           2
 K lysine              6.2         26           2
 L leucine             6.7         28           2
 M methionine          1.9          8           2
 N asparagine          5.7         24           3
 P proline             4.0         17           2
 Q glutamine           5.9         25           1
 R arginine            5.5         23           2
 S serine              6.9         29           3
 T threonine           5.7         24           2
 V valine              9.3         39           2
 W tryptophan          2.1          9           1
 Y tyrosine            4.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protease, serine 11A isoform 1 
TMPRSS11A             0.988   transmembrane protease, serine 11A isoform 2 
TMPRSS11E2            0.409   transmembrane protease, serine 11E2 
TMPRSS11E             0.409   transmembrane protease, serine 11E 
TMPRSS11F             0.392   transmembrane protease, serine 11F 
TMPRSS11D             0.391   transmembrane protease, serine 11D 
TMPRSS11B             0.352   transmembrane protease, serine 11B 
HPN                   0.208   hepsin 
HPN                   0.208   hepsin 
TMPRSS6               0.200   transmembrane protease, serine 6 
ST14                  0.191   matriptase 
TMPRSS3               0.191   transmembrane protease, serine 3 isoform 1 
TMPRSS2               0.190   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.190   transmembrane protease, serine 2 isoform 2 
ACR                   0.186   acrosin precursor 
PRSS8                 0.185   prostasin preproprotein 
TMPRSS13              0.185   transmembrane protease, serine 13 
PRSS7                 0.183   enterokinase precursor 
F11                   0.179   coagulation factor XI precursor 
TMPRSS4               0.179   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.179   transmembrane protease, serine 4 isoform 1 
TPSG1                 0.178   transmembrane tryptase preproprotein 
TMPRSS9               0.177   transmembrane protease, serine 9 
TESSP1                0.173   testis-specific serine protease 1 
TMPRSS5               0.168   transmembrane protease, serine 5 
CORIN                 0.167   corin 
PRSS21                0.166   testisin isoform 1 
F12                   0.165   coagulation factor XII precursor 
KLKB1                 0.165   plasma kallikrein B1 precursor 
PRSS21                0.163   testisin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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