Guide to the Human Genome
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Name: TMPRSS11A Sequence: fasta or formatted (418aa) NCBI GI: 167466252
Description:

transmembrane protease, serine 11A isoform 2

Referenced in:

Serine Proteases

Other entries for this name:
alt prot [421aa] transmembrane protease, serine 11A isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         26           2
 C cysteine            1.9          8           1
 D aspartate           5.0         21           2
 E glutamate           3.6         15           2
 F phenylalanine       3.6         15           1
 G glycine             6.5         27           2
 H histidine           1.7          7           1
 I isoleucine          7.7         32           2
 K lysine              6.2         26           2
 L leucine             6.7         28           2
 M methionine          1.9          8           2
 N asparagine          5.7         24           3
 P proline             4.1         17           2
 Q glutamine           5.7         24           1
 R arginine            5.5         23           2
 S serine              6.7         28           3
 T threonine           5.7         24           2
 V valine              9.1         38           2
 W tryptophan          2.2          9           1
 Y tyrosine            4.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.994   transmembrane protease, serine 11A isoform 1 
TMPRSS11E2            0.416   transmembrane protease, serine 11E2 
TMPRSS11E             0.415   transmembrane protease, serine 11E 
TMPRSS11F             0.399   transmembrane protease, serine 11F 
TMPRSS11D             0.398   transmembrane protease, serine 11D 
TMPRSS11B             0.359   transmembrane protease, serine 11B 
HPN                   0.209   hepsin 
HPN                   0.209   hepsin 
TMPRSS6               0.201   transmembrane protease, serine 6 
TMPRSS3               0.196   transmembrane protease, serine 3 isoform 1 
ST14                  0.192   matriptase 
TMPRSS2               0.191   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.191   transmembrane protease, serine 2 isoform 2 
ACR                   0.187   acrosin precursor 
PRSS8                 0.186   prostasin preproprotein 
TMPRSS13              0.186   transmembrane protease, serine 13 
PRSS7                 0.184   enterokinase precursor 
F11                   0.180   coagulation factor XI precursor 
TMPRSS4               0.180   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.180   transmembrane protease, serine 4 isoform 1 
TPSG1                 0.179   transmembrane tryptase preproprotein 
TMPRSS9               0.178   transmembrane protease, serine 9 
TESSP1                0.174   testis-specific serine protease 1 
TMPRSS5               0.169   transmembrane protease, serine 5 
CORIN                 0.168   corin 
PRSS21                0.167   testisin isoform 1 
F12                   0.166   coagulation factor XII precursor 
KLKB1                 0.166   plasma kallikrein B1 precursor 
PRSS21                0.164   testisin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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