Guide to the Human Genome
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Name: TMPRSS4 Sequence: fasta or formatted (432aa) NCBI GI: 145701030
Description:

transmembrane protease, serine 4 isoform 3

Referenced in:

Serine Proteases

Other entries for this name:
alt prot [437aa] transmembrane protease, serine 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         25           2
 C cysteine            3.7         16           1
 D aspartate           6.7         29           2
 E glutamate           4.9         21           2
 F phenylalanine       3.7         16           2
 G glycine             8.1         35           2
 H histidine           1.9          8           1
 I isoleucine          6.5         28           4
 K lysine              5.1         22           1
 L leucine             9.3         40           2
 M methionine          2.3         10           2
 N asparagine          2.8         12           1
 P proline             6.5         28           1
 Q glutamine           4.4         19           1
 R arginine            3.5         15           1
 S serine              7.6         33           2
 T threonine           4.4         19           1
 V valine              7.9         34           3
 W tryptophan          2.5         11           1
 Y tyrosine            2.5         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.993   transmembrane protease, serine 4 isoform 1 
TMPRSS13              0.270   transmembrane protease, serine 13 
TMPRSS2               0.260   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.260   transmembrane protease, serine 2 isoform 2 
TMPRSS3               0.245   transmembrane protease, serine 3 isoform 1 
HPN                   0.224   hepsin 
HPN                   0.224   hepsin 
TMPRSS5               0.223   transmembrane protease, serine 5 
PRSS7                 0.213   enterokinase precursor 
TMPRSS11D             0.211   transmembrane protease, serine 11D 
TMPRSS6               0.193   transmembrane protease, serine 6 
KLKB1                 0.186   plasma kallikrein B1 precursor 
TMPRSS11B             0.185   transmembrane protease, serine 11B 
TMPRSS11F             0.184   transmembrane protease, serine 11F 
ACR                   0.183   acrosin precursor 
TMPRSS11E             0.182   transmembrane protease, serine 11E 
TMPRSS11E2            0.182   transmembrane protease, serine 11E2 
PRSS33                0.181   protease, serine, 33 
TESSP1                0.180   testis-specific serine protease 1 
TPSG1                 0.180   transmembrane tryptase preproprotein 
PRSS21                0.180   testisin isoform 1 
PRSS21                0.177   testisin isoform 2 
PRSS27                0.176   marapsin 
TMPRSS9               0.175   transmembrane protease, serine 9 
PRSS22                0.175   protease, serine, 22 
CORIN                 0.170   corin 
TMPRSS11A             0.170   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.170   transmembrane protease, serine 11A isoform 1 
PRSS8                 0.167   prostasin preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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