Guide to the Human Genome
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Name: TMPRSS9 Sequence: fasta or formatted (1059aa) NCBI GI: 33667063
Description:

transmembrane protease, serine 9

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9        105           2
 C cysteine            3.6         38           2
 D aspartate           3.6         38           2
 E glutamate           5.1         54           3
 F phenylalanine       3.0         32           2
 G glycine             9.5        101           2
 H histidine           2.4         25           1
 I isoleucine          3.3         35           2
 K lysine              3.1         33           2
 L leucine            10.1        107           2
 M methionine          1.4         15           1
 N asparagine          1.4         15           1
 P proline             7.6         80           2
 Q glutamine           3.7         39           1
 R arginine            6.6         70           3
 S serine              7.1         75           2
 T threonine           6.6         70           2
 V valine              7.6         81           2
 W tryptophan          2.3         24           1
 Y tyrosine            2.1         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protease, serine 9 
TMPRSS6               0.117   transmembrane protease, serine 6 
ST14                  0.117   matriptase 
PRSS36                0.100   protease, serine, 36 
TMPRSS7               0.097   transmembrane protease, serine 7 
TMPRSS11E             0.089   transmembrane protease, serine 11E 
TMPRSS11E2            0.089   transmembrane protease, serine 11E2 
TMPRSS5               0.087   transmembrane protease, serine 5 
POL3S                 0.086   polyserase 3 
PRSS27                0.083   marapsin 
CORIN                 0.080   corin 
TMPRSS13              0.079   transmembrane protease, serine 13 
PRSS7                 0.078   enterokinase precursor 
TMPRSS11D             0.078   transmembrane protease, serine 11D 
PRSS8                 0.078   prostasin preproprotein 
KLKB1                 0.077   plasma kallikrein B1 precursor 
HPN                   0.077   hepsin 
HPN                   0.077   hepsin 
PRSS33                0.077   protease, serine, 33 
TMPRSS3               0.077   transmembrane protease, serine 3 isoform 1 
ACR                   0.077   acrosin precursor 
TMPRSS2               0.076   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.076   transmembrane protease, serine 2 isoform 2 
PRSS22                0.076   protease, serine, 22 
OVCH1                 0.076   ovochymase 1 
TMPRSS11F             0.075   transmembrane protease, serine 11F 
PRSS21                0.074   testisin isoform 2 
PRSS21                0.074   testisin isoform 1 
TMPRSS11B             0.073   transmembrane protease, serine 11B 
PRSS1                 0.071   protease, serine, 1 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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