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Search of human proteins with 169161714
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169161714 PREDICTED: tetratricopeptide repeat domain 34
[Homo sapiens]
(747 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169161714 PREDICTED: tetratricopeptide repeat domain 34 [Homo... 1466 0.0
gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo... 1466 0.0
gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo ... 449 e-126
gi|225735595 RNA polymerase II associated protein 3 isoform 3 [H... 37 0.051
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H... 37 0.051
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 37 0.051
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] 37 0.067
gi|239755963 PREDICTED: similar to hCG2019585 [Homo sapiens] 36 0.15
gi|239750485 PREDICTED: hypothetical protein XP_002347420 [Homo ... 36 0.15
gi|239744784 PREDICTED: hypothetical protein XP_002343271 [Homo ... 36 0.15
gi|19923274 discs large homolog-associated protein 1 isoform alp... 33 0.74
gi|51339031 discs large homolog-associated protein 1 isoform bet... 33 0.74
gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precurs... 33 1.3
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs... 33 1.3
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 32 2.2
gi|62177129 Nedd4 binding protein 3 [Homo sapiens] 32 2.2
gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens] 32 2.8
gi|7019519 proprotein convertase subtilisin/kexin type 1 inhibit... 32 2.8
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 31 3.7
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 31 3.7
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 31 4.8
gi|27262638 sperm associated antigen 1 [Homo sapiens] 31 4.8
gi|27262636 sperm associated antigen 1 [Homo sapiens] 31 4.8
gi|61966761 leucine rich repeat containing 26 [Homo sapiens] 30 6.3
gi|29893555 angiopoietin-like 6 [Homo sapiens] 30 6.3
gi|222136634 tetratricopeptide repeat domain 26 isoform 1 [Homo ... 30 6.3
gi|222136605 tetratricopeptide repeat domain 26 isoform 2 [Homo ... 30 6.3
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 8.2
gi|55770876 notch4 preproprotein [Homo sapiens] 30 8.2
gi|12056463 coagulation factor VIII-associated protein [Homo sap... 30 8.2
>gi|169161714 PREDICTED: tetratricopeptide repeat domain 34 [Homo
sapiens]
Length = 747
Score = 1466 bits (3796), Expect = 0.0
Identities = 747/747 (100%), Positives = 747/747 (100%)
Query: 1 MMSAQELVACLCREGEQHLALGELPLATAFYLAAFSCHAPSALQSVRTALAQARGAAVVA 60
MMSAQELVACLCREGEQHLALGELPLATAFYLAAFSCHAPSALQSVRTALAQARGAAVVA
Sbjct: 1 MMSAQELVACLCREGEQHLALGELPLATAFYLAAFSCHAPSALQSVRTALAQARGAAVVA 60
Query: 61 TLESWCRGDSQIPAIHWDGMAVVSLTGSLASAFLGALCPDHPAAILHLLAGLLARGRHEE 120
TLESWCRGDSQIPAIHWDGMAVVSLTGSLASAFLGALCPDHPAAILHLLAGLLARGRHEE
Sbjct: 61 TLESWCRGDSQIPAIHWDGMAVVSLTGSLASAFLGALCPDHPAAILHLLAGLLARGRHEE 120
Query: 121 VVQRCSALLDSHAQQVLELRLTRALAWVLSGVQAADGVAAYLQAFASSADRTVAFIRTHQ 180
VVQRCSALLDSHAQQVLELRLTRALAWVLSGVQAADGVAAYLQAFASSADRTVAFIRTHQ
Sbjct: 121 VVQRCSALLDSHAQQVLELRLTRALAWVLSGVQAADGVAAYLQAFASSADRTVAFIRTHQ 180
Query: 181 RPHLPALLSALQDYLSGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRF 240
RPHLPALLSALQDYLSGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRF
Sbjct: 181 RPHLPALLSALQDYLSGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRF 240
Query: 241 EDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFRESPSG 300
EDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFRESPSG
Sbjct: 241 EDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFRESPSG 300
Query: 301 ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV 360
ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV
Sbjct: 301 ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV 360
Query: 361 LLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLAL 420
LLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLAL
Sbjct: 361 LLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLAL 420
Query: 421 RGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTLDYVTAC 480
RGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTLDYVTAC
Sbjct: 421 RGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTLDYVTAC 480
Query: 481 RLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTT 540
RLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTT
Sbjct: 481 RLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTT 540
Query: 541 QEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVL 600
QEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVL
Sbjct: 541 QEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVL 600
Query: 601 ARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILR 660
ARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILR
Sbjct: 601 ARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILR 660
Query: 661 ARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRA 720
ARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRA
Sbjct: 661 ARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRA 720
Query: 721 EPGNVQALCGRALVHLALDQLQVPPHS 747
EPGNVQALCGRALVHLALDQLQVPPHS
Sbjct: 721 EPGNVQALCGRALVHLALDQLQVPPHS 747
>gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo
sapiens]
Length = 901
Score = 1466 bits (3796), Expect = 0.0
Identities = 747/747 (100%), Positives = 747/747 (100%)
Query: 1 MMSAQELVACLCREGEQHLALGELPLATAFYLAAFSCHAPSALQSVRTALAQARGAAVVA 60
MMSAQELVACLCREGEQHLALGELPLATAFYLAAFSCHAPSALQSVRTALAQARGAAVVA
Sbjct: 155 MMSAQELVACLCREGEQHLALGELPLATAFYLAAFSCHAPSALQSVRTALAQARGAAVVA 214
Query: 61 TLESWCRGDSQIPAIHWDGMAVVSLTGSLASAFLGALCPDHPAAILHLLAGLLARGRHEE 120
TLESWCRGDSQIPAIHWDGMAVVSLTGSLASAFLGALCPDHPAAILHLLAGLLARGRHEE
Sbjct: 215 TLESWCRGDSQIPAIHWDGMAVVSLTGSLASAFLGALCPDHPAAILHLLAGLLARGRHEE 274
Query: 121 VVQRCSALLDSHAQQVLELRLTRALAWVLSGVQAADGVAAYLQAFASSADRTVAFIRTHQ 180
VVQRCSALLDSHAQQVLELRLTRALAWVLSGVQAADGVAAYLQAFASSADRTVAFIRTHQ
Sbjct: 275 VVQRCSALLDSHAQQVLELRLTRALAWVLSGVQAADGVAAYLQAFASSADRTVAFIRTHQ 334
Query: 181 RPHLPALLSALQDYLSGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRF 240
RPHLPALLSALQDYLSGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRF
Sbjct: 335 RPHLPALLSALQDYLSGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRF 394
Query: 241 EDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFRESPSG 300
EDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFRESPSG
Sbjct: 395 EDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFRESPSG 454
Query: 301 ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV 360
ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV
Sbjct: 455 ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV 514
Query: 361 LLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLAL 420
LLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLAL
Sbjct: 515 LLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLAL 574
Query: 421 RGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTLDYVTAC 480
RGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTLDYVTAC
Sbjct: 575 RGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTLDYVTAC 634
Query: 481 RLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTT 540
RLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTT
Sbjct: 635 RLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTT 694
Query: 541 QEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVL 600
QEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVL
Sbjct: 695 QEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVL 754
Query: 601 ARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILR 660
ARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILR
Sbjct: 755 ARLALLQLRRGFFYDANQLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILR 814
Query: 661 ARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRA 720
ARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRA
Sbjct: 815 ARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMFDFNTVLRA 874
Query: 721 EPGNVQALCGRALVHLALDQLQVPPHS 747
EPGNVQALCGRALVHLALDQLQVPPHS
Sbjct: 875 EPGNVQALCGRALVHLALDQLQVPPHS 901
>gi|239741018 PREDICTED: hypothetical protein XP_002342056 [Homo
sapiens]
Length = 566
Score = 449 bits (1155), Expect = e-126
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 514 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 573
MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL
Sbjct: 1 MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADAL 60
Query: 574 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 633
YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ
Sbjct: 61 YRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDANQLVKKLVQSGDTACLQ 120
Query: 634 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 693
PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES
Sbjct: 121 PTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASES 180
Query: 694 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 742
LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ
Sbjct: 181 LLARARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 229
Score = 84.7 bits (208), Expect = 3e-16
Identities = 145/552 (26%), Positives = 208/552 (37%), Gaps = 118/552 (21%)
Query: 195 LSGHPEAGHSAGQ-----QETGGQR--------------LLAALDPRGTRSDTLSPEALL 235
L P AG S Q ETGG LL LD S L+ +AL
Sbjct: 2 LQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALY 61
Query: 236 HSGRFEDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFFLDGRAQDVFWNLQEAFR 295
GR E+ A AL P + P R A L + R FF D +++ +
Sbjct: 62 RLGRLEETHKALLVALSRRPQAA-PVLARLALLQLRRG---FFYDANQL-----VKKLVQ 112
Query: 296 ESPSGARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVT 355
+ + VF +D++ ++
Sbjct: 113 SGDTACLQPTLDVFCHEDRQLLQGHCH--------------------------------A 140
Query: 356 RALRVLLRLAPAGARPALGARLAECLL-LAGDAAGARAMCERLLRPARPEDPAGDRAGDR 414
RAL +L R P GA + + A L LA AAG++A E LL AR
Sbjct: 141 RALAIL-RARPGGADGRVHTKEAIAYLSLAIFAAGSQAS-ESLLARAR------------ 186
Query: 415 APLLALRGFCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLGTL 474
C G + AM DF TV+ PG V+ALCGR L+ +
Sbjct: 187 ---------CYGFLGQKKTAMFDFNTVLRA---EPGN-VQALCGRALVHLALDQLQEAVD 233
Query: 475 DYVTACRLRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAE 534
D V+A +L P + ++ P Q L+ L R +L + P +
Sbjct: 234 DIVSALKLGPGTVVPELRSLKPEAQ-ALITQGLYSHCRALLSQLP--------------D 278
Query: 535 TGGPTTQEGVACGVHQLATLLMELDSEDEASRLLAADALYRLGRLEETHKALLVALSRRP 594
TG P + G+ + L+++DS LL AD L G EE L AL R P
Sbjct: 279 TGAPLEDKDTQ-GLLAVGEALIKIDSGQPHWHLLLADILMAQGSYEEAGTHLEKALHRAP 337
Query: 595 QAAPVLARLALLQLRRGFFYDANQLVKKL--VQSGDTACLQPTLDVFCHEDRQLLQGHCH 652
+ ARL LLQL++G A + ++ L V + D +CL L+ +RQ L
Sbjct: 338 TSEAARARLGLLQLKKGDVPGAARDLQSLAEVDAPDLSCLLHLLEA---SERQSLAQAAA 394
Query: 653 ARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLARARCYGFLGQKKTAMF 712
A +L A ++A+ Y SL++ A+GS A L RA C L + A+
Sbjct: 395 QEAGTLLDAG--------QPRQALGYCSLSVLASGSSACH-LRLRATCLAELQEFGRALR 445
Query: 713 DFNTVLRAEPGN 724
D + VL+ G+
Sbjct: 446 DLDHVLQEALGD 457
>gi|225735595 RNA polymerase II associated protein 3 isoform 3 [Homo
sapiens]
Length = 506
Score = 37.4 bits (85), Expect = 0.051
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 651 CHARALAILRARPGGADGRVHTKEAIAYLSL------------AIFAAGSQASESLLARA 698
C+ R +A GA+ + A+AYL + AI GS S++ R
Sbjct: 145 CYTRGIAA-----DGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSY-SKAFARRG 198
Query: 699 RCYGFLGQKKTAMFDFNTVLRAEPGNVQAL 728
FLG+ A DF TVL EPGN QA+
Sbjct: 199 TARTFLGKLNEAKQDFETVLLLEPGNKQAV 228
>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
sapiens]
Length = 631
Score = 37.4 bits (85), Expect = 0.051
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 651 CHARALAILRARPGGADGRVHTKEAIAYLSL------------AIFAAGSQASESLLARA 698
C+ R +A GA+ + A+AYL + AI GS S++ R
Sbjct: 304 CYTRGIAA-----DGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSY-SKAFARRG 357
Query: 699 RCYGFLGQKKTAMFDFNTVLRAEPGNVQAL 728
FLG+ A DF TVL EPGN QA+
Sbjct: 358 TARTFLGKLNEAKQDFETVLLLEPGNKQAV 387
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 37.4 bits (85), Expect = 0.051
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 651 CHARALAILRARPGGADGRVHTKEAIAYLSL------------AIFAAGSQASESLLARA 698
C+ R +A GA+ + A+AYL + AI GS S++ R
Sbjct: 304 CYTRGIAA-----DGANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSY-SKAFARRG 357
Query: 699 RCYGFLGQKKTAMFDFNTVLRAEPGNVQAL 728
FLG+ A DF TVL EPGN QA+
Sbjct: 358 TARTFLGKLNEAKQDFETVLLLEPGNKQAV 387
>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
Length = 349
Score = 37.0 bits (84), Expect = 0.067
Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 12/89 (13%)
Query: 356 RALRVLLRLAPAGA--RPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGD 413
RALR+LL L P G R L A LA C LL G A C+R+L +R
Sbjct: 235 RALRLLLTLPPPGPPERTVLHANLAACQLLLGQPQLAAQSCDRVL----------EREPG 284
Query: 414 RAPLLALRGFCALHAGDSRRAMEDFQTVV 442
L RG G+ +A D + V+
Sbjct: 285 HLKALYRRGVAQAALGNLEKATADLKKVL 313
Score = 32.3 bits (72), Expect = 1.6
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 643 DRQLLQGHCHARALAILRARPGGADGRVHTKEAIAYLSLAIFAAGSQASESLLAR-ARCY 701
+++ L AR + RA G +G L L + G L A A C
Sbjct: 205 EKEALAREERARGTELFRA--GNPEGAARCYGRALRLLLTLPPPGPPERTVLHANLAACQ 262
Query: 702 GFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 742
LGQ + A + VL EPG+++AL R + AL L+
Sbjct: 263 LLLGQPQLAAQSCDRVLEREPGHLKALYRRGVAQAALGNLE 303
>gi|239755963 PREDICTED: similar to hCG2019585 [Homo sapiens]
Length = 117
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 182 PHLPALLSALQDYLSGHPEAGHSAGQQETGG 212
P P ++S LQD++ GHP+A AGQQE G
Sbjct: 2 PLPPCVVSTLQDFILGHPKAEDIAGQQEIHG 32
>gi|239750485 PREDICTED: hypothetical protein XP_002347420 [Homo
sapiens]
Length = 117
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 182 PHLPALLSALQDYLSGHPEAGHSAGQQETGG 212
P P ++S LQD++ GHP+A AGQQE G
Sbjct: 2 PLPPCVVSTLQDFILGHPKAEDIAGQQEIHG 32
>gi|239744784 PREDICTED: hypothetical protein XP_002343271 [Homo
sapiens]
Length = 117
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 182 PHLPALLSALQDYLSGHPEAGHSAGQQETGG 212
P P ++S LQD++ GHP+A AGQQE G
Sbjct: 2 PLPPCVVSTLQDFILGHPKAEDIAGQQEIHG 32
>gi|19923274 discs large homolog-associated protein 1 isoform alpha
[Homo sapiens]
Length = 977
Score = 33.5 bits (75), Expect = 0.74
Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 15/187 (8%)
Query: 116 GRHEEVVQRCSALLDSHAQQVLELRLT-----RALAWVLSGVQAADGVAAYLQAFASSAD 170
G+ E V + + L+S A + L+L + R+ ++V + + + +SS
Sbjct: 458 GQFESVCESVFSELESQAVEALDLPMPGCFRMRSHSYVRAIEKGCSQDDECVSLRSSSPP 517
Query: 171 RTVAFIRTHQRPHLPALLSALQDYLSGHPEAGH-----SAGQQETGGQRLLAALDPRGTR 225
RT +RT Q + + ++ + P S Q + A +D +G R
Sbjct: 518 RTTTTVRTIQSSTVSSCITTYKKTPPPVPPRTTTKPFISITAQSSTESAQDAYMDGQGQR 577
Query: 226 SDTLSPEALLHSGRFEDCLAACSRALEA-----HPTGSEPQGERRAALLVTRAASAFFLD 280
D +S L +S D + A + A+EA H S+ G A + T + +
Sbjct: 578 GDIISQSGLSNSTESLDSMKALTAAIEAANAQIHGPASQHMGNNTATVTTTTTIATVTTE 637
Query: 281 GRAQDVF 287
R +D F
Sbjct: 638 DRKKDHF 644
>gi|51339031 discs large homolog-associated protein 1 isoform beta
[Homo sapiens]
Length = 675
Score = 33.5 bits (75), Expect = 0.74
Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 15/187 (8%)
Query: 116 GRHEEVVQRCSALLDSHAQQVLELRLT-----RALAWVLSGVQAADGVAAYLQAFASSAD 170
G+ E V + + L+S A + L+L + R+ ++V + + + +SS
Sbjct: 156 GQFESVCESVFSELESQAVEALDLPMPGCFRMRSHSYVRAIEKGCSQDDECVSLRSSSPP 215
Query: 171 RTVAFIRTHQRPHLPALLSALQDYLSGHPEAGH-----SAGQQETGGQRLLAALDPRGTR 225
RT +RT Q + + ++ + P S Q + A +D +G R
Sbjct: 216 RTTTTVRTIQSSTVSSCITTYKKTPPPVPPRTTTKPFISITAQSSTESAQDAYMDGQGQR 275
Query: 226 SDTLSPEALLHSGRFEDCLAACSRALEA-----HPTGSEPQGERRAALLVTRAASAFFLD 280
D +S L +S D + A + A+EA H S+ G A + T + +
Sbjct: 276 GDIISQSGLSNSTESLDSMKALTAAIEAANAQIHGPASQHMGNNTATVTTTTTIATVTTE 335
Query: 281 GRAQDVF 287
R +D F
Sbjct: 336 DRKKDHF 342
>gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precursor
[Homo sapiens]
Length = 814
Score = 32.7 bits (73), Expect = 1.3
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 196 SGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRFEDCLAACSRALEAHP 255
+G + G +E QRLL + G + LS +LH F D L L P
Sbjct: 623 TGEVRTARTLGDREAARQRLLVTVRDGGQQP--LSATVMLHL-IFADSLQEIQPDLSDRP 679
Query: 256 TGSEPQGERRAALLVTRA-ASAFFL 279
T S+PQ E + L+V A S FL
Sbjct: 680 TPSDPQAELQFHLVVALALISVLFL 704
>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 32.7 bits (73), Expect = 1.3
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 196 SGHPEAGHSAGQQETGGQRLLAALDPRGTRSDTLSPEALLHSGRFEDCLAACSRALEAHP 255
+G + G +E QRLL + G + LS +LH F D L L P
Sbjct: 623 TGEVRTARTLGDREAARQRLLVTVRDGGQQP--LSATVMLHL-IFADSLQEIQPDLSDRP 679
Query: 256 TGSEPQGERRAALLVTRA-ASAFFL 279
T S+PQ E + L+V A S FL
Sbjct: 680 TPSDPQAELQFHLVVALALISVLFL 704
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) [Homo sapiens]
Length = 543
Score = 32.0 bits (71), Expect = 2.2
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 219 LDPRGTRSDTLSPEALLHSGRFEDCLAACSRALEAHPTGSEPQGERRAALLVTRAASAFF 278
LDP T G + C C +A+E E R+ A R +++F
Sbjct: 254 LDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY--RQIAKAYARIGNSYF 311
Query: 279 LDGRAQDV--FWNLQEAFRESPSGARRQFQAVFSVQDQERV 317
+ + +D F+N A +P ++ QA +++QER+
Sbjct: 312 KEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERL 352
>gi|62177129 Nedd4 binding protein 3 [Homo sapiens]
Length = 544
Score = 32.0 bits (71), Expect = 2.2
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 290 LQEAFRESPSGARRQFQAVFSVQDQER-VRAQAQEAADVGFARFQEAVRNHPELREDAGR 348
L++ RE+ + ++ +FS++ Q R RAQAQ A D R +EAVR+ L+E A R
Sbjct: 380 LKQQLREAQAELAQKLAEIFSLKTQLRGSRAQAQ-AQDAELVRLREAVRS---LQEQAPR 435
Query: 349 E 349
E
Sbjct: 436 E 436
>gi|4506141 HtrA serine peptidase 1 precursor [Homo sapiens]
Length = 480
Score = 31.6 bits (70), Expect = 2.8
Identities = 40/133 (30%), Positives = 48/133 (36%), Gaps = 17/133 (12%)
Query: 358 LRVLLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPL 417
L +LL APA A+ + R A AAG CE P +PE G RA D
Sbjct: 11 LLLLLLAAPASAQLSRAGRSAPL------AAGCPDRCEPARCPPQPEHCEGGRARDACGC 64
Query: 418 LALRG-----FCALHAGDSRRAMEDFQTVVEQGAPHPGGCVRALCGRGLLRVLAGSAFLG 472
+ G C L G E Q VV G P VR GL + G
Sbjct: 65 CEVCGAPEGAACGLQEGP---CGEGLQCVVPFGVP-ASATVRRRAQAGLCVCASSEPVCG 120
Query: 473 T--LDYVTACRLR 483
+ Y C+LR
Sbjct: 121 SDANTYANLCQLR 133
>gi|7019519 proprotein convertase subtilisin/kexin type 1 inhibitor
precursor [Homo sapiens]
Length = 260
Score = 31.6 bits (70), Expect = 2.8
Identities = 61/213 (28%), Positives = 78/213 (36%), Gaps = 52/213 (24%)
Query: 223 GTRSDTLSPEALLHSGRFEDCLAACSRALE-------AHPTGSEPQGERRAALLVTRAAS 275
G R+ + LL G F A C+R ++ A P +E RR V R +
Sbjct: 9 GPRAGGVGLLVLLLLGLFRPPPALCARPVKEPRGLSAASPPLAETGAPRRFRRSVPRGEA 68
Query: 276 AFFLDGRAQDVFWNLQEAFRESPSGARRQFQAVFSVQDQERVRAQAQEAAD------VGF 329
A G Q++ R + + QER RA+AQEA D
Sbjct: 69 A----GAVQEL---------------ARALAHLLEAERQERARAEAQEAEDQQARVLAQL 109
Query: 330 ARFQEAVRN-HPELREDAGRELLAPVTRALRVLL--RLAPAGARPALGARLAECLLLAGD 386
R A RN P L D + AP + R LL RL PA AL A+L
Sbjct: 110 LRVWGAPRNSDPALGLDDDPD--APAAQLARALLRARLDPA----ALAAQLV-------- 155
Query: 387 AAGARAMCERLLRPARPEDPAG---DRAGDRAP 416
A A R P + PAG + AGD P
Sbjct: 156 PAPVPAAALRPRPPVYDDGPAGPDAEEAGDETP 188
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 31.2 bits (69), Expect = 3.7
Identities = 49/157 (31%), Positives = 58/157 (36%), Gaps = 18/157 (11%)
Query: 400 PARPEDPAGDRAGDRAPLLALRGFCALHAGDSRRAMEDFQTVVEQGAPH---PGGCVRAL 456
PA P AG G PL ALRG C A RR Q AP P G R
Sbjct: 170 PALPAPAAGRALGTDEPL-ALRGQCGPAA---RRGCAQEQLRNAPWAPRAHSPAG--RLA 223
Query: 457 CG-----RGLLRVLAGSAFLGTLDYVTACRLRPEEALLAAKAYVPWNQRGLLLVVLREEA 511
G RG R AG+A G + A P ++ +Y+ LL + A
Sbjct: 224 LGLIAPRRGAGRAGAGAAACGRRGRIAA----PLSGVVQKASYLRPKNLPRLLSMPSAAA 279
Query: 512 RGMLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGV 548
R PR+G S R A G + E ACGV
Sbjct: 280 RPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGV 316
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 31.2 bits (69), Expect = 3.7
Identities = 49/157 (31%), Positives = 58/157 (36%), Gaps = 18/157 (11%)
Query: 400 PARPEDPAGDRAGDRAPLLALRGFCALHAGDSRRAMEDFQTVVEQGAPH---PGGCVRAL 456
PA P AG G PL ALRG C A RR Q AP P G R
Sbjct: 170 PALPAPAAGRALGTDEPL-ALRGQCGPAA---RRGCAQEQLRNAPWAPRAHSPAG--RLA 223
Query: 457 CG-----RGLLRVLAGSAFLGTLDYVTACRLRPEEALLAAKAYVPWNQRGLLLVVLREEA 511
G RG R AG+A G + A P ++ +Y+ LL + A
Sbjct: 224 LGLIAPRRGAGRAGAGAAACGRRGRIAA----PLSGVVQKASYLRPKNLPRLLSMPSAAA 279
Query: 512 RGMLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGV 548
R PR+G S R A G + E ACGV
Sbjct: 280 RPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGV 316
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 30.8 bits (68), Expect = 4.8
Identities = 37/128 (28%), Positives = 50/128 (39%), Gaps = 20/128 (15%)
Query: 301 ARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRELLAPVTRALRV 360
ARR F +ER R Q A FA ++ + HP R+ + E+L + +
Sbjct: 150 ARRVF-----TNSRERWRQQNVNGA---FAELRKLLPTHPPDRKLSKNEVLRLAMKYIGF 201
Query: 361 LLRLA-------PAGARPALGARLAECLLLAGDAA----GARAMCERLLRPARPEDPAGD 409
L+RL AG P G R + D A G RA +PA P DP G
Sbjct: 202 LVRLLRDQAAALAAGPTPP-GPRKRPVHRVPDDGARRGSGRRAEAAARSQPAPPADPDGS 260
Query: 410 RAGDRAPL 417
G P+
Sbjct: 261 PGGAARPI 268
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 30.8 bits (68), Expect = 4.8
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 216 LAALDPRGTR-SDTLS------PEALLHSGRFEDCLAACSRALEAHPTGSEPQGERRAA 267
+A L+P G+ +D LS L G C+ C+RALE HP +P R A
Sbjct: 472 IALLEPAGSEIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMA 530
Score = 30.8 bits (68), Expect = 4.8
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 697 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 742
RA CY L Q + A D + L+ GNV+A RAL H L Q
Sbjct: 663 RALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQ 708
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 30.8 bits (68), Expect = 4.8
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 216 LAALDPRGTR-SDTLS------PEALLHSGRFEDCLAACSRALEAHPTGSEPQGERRAA 267
+A L+P G+ +D LS L G C+ C+RALE HP +P R A
Sbjct: 472 IALLEPAGSEIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMA 530
Score = 30.8 bits (68), Expect = 4.8
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 697 RARCYGFLGQKKTAMFDFNTVLRAEPGNVQALCGRALVHLALDQLQ 742
RA CY L Q + A D + L+ GNV+A RAL H L Q
Sbjct: 663 RALCYLKLCQFEEAKQDCDQALQLADGNVKAFYRRALAHKGLKNYQ 708
>gi|61966761 leucine rich repeat containing 26 [Homo sapiens]
Length = 334
Score = 30.4 bits (67), Expect = 6.3
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 356 RALRVLLRLAPAGARPALGARLAECLLLAGDAAGARAMCERL----LRPARPEDPAGD 409
R L V+ L PA + LA CL L RA RL LRP RP DP D
Sbjct: 260 RDLAVVYTLGPA----SFLVSLASCLALGSGLTACRARRRRLRTAALRPPRPPDPNPD 313
>gi|29893555 angiopoietin-like 6 [Homo sapiens]
Length = 470
Score = 30.4 bits (67), Expect = 6.3
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 482 LRPEEALLAAKAYVPWNQRGLLLVVLREEARGMLQRSPRAGPSRAQGRREAAETGGPTTQ 541
LR + L AA V R L R+E+RG+ S R G RAQ + EA GP
Sbjct: 76 LRELQRLAAADGAVAGEVRAL-----RKESRGL---SARLGQLRAQLQHEAGPGAGPGAD 127
Query: 542 EGV--ACGVHQLATLLMELDSEDE--ASRLLAADALYR-LGRLEETHKALLVALSR 592
G A + L ++ +E + A+R D +R L +L +L+ L R
Sbjct: 128 LGAEPAAALALLGERVLNASAEAQRAAARFHQLDVKFRELAQLVTQQSSLIARLER 183
>gi|222136634 tetratricopeptide repeat domain 26 isoform 1 [Homo
sapiens]
Length = 554
Score = 30.4 bits (67), Expect = 6.3
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 422 GFCALHAGDSRRAMEDFQTVVEQ 444
G+CA H GD +RA+E+++ ++
Sbjct: 64 GYCAFHLGDYKRALEEYENATKE 86
>gi|222136605 tetratricopeptide repeat domain 26 isoform 2 [Homo
sapiens]
Length = 487
Score = 30.4 bits (67), Expect = 6.3
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 422 GFCALHAGDSRRAMEDFQTVVEQ 444
G+CA H GD +RA+E+++ ++
Sbjct: 64 GYCAFHLGDYKRALEEYENATKE 86
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 30.0 bits (66), Expect = 8.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 290 LQEAFRESPSGARRQFQAVFSVQDQERVRAQAQEAADVGFARFQEAVRNHPELREDAGRE 349
L++A R RRQ Q Q QE+ + Q Q+AA V A +A + P+ D RE
Sbjct: 1269 LEQARRAHEEARRRQEQQ--QQQRQEQQQQQQQQAAAVAAAATPQAQSSQPQSMLDQQRE 1326
Query: 350 L 350
L
Sbjct: 1327 L 1327
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 30.0 bits (66), Expect = 8.2
Identities = 22/59 (37%), Positives = 26/59 (44%)
Query: 363 RLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPARPEDPAGDRAGDRAPLLALR 421
RL AGA P R L A AA AR +C+ LLR + A G +LA R
Sbjct: 1652 RLLEAGANPNQPDRAGRTPLHAAVAADAREVCQLLLRSRQTAVDARTEDGTTPLMLAAR 1710
>gi|12056463 coagulation factor VIII-associated protein [Homo
sapiens]
Length = 371
Score = 30.0 bits (66), Expect = 8.2
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 356 RALRVLLRLAPAGARPALGARLAECLLLAGDAAGARAMCERLLRPAR 402
RA ++ L P A ALG A C LLA D GA A+ R+ R AR
Sbjct: 167 RAAQLQLPQLPLAALQALG-EAASCQLLARDYTGALAVFTRMQRLAR 212
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,129,823
Number of Sequences: 37866
Number of extensions: 1271646
Number of successful extensions: 3763
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3719
Number of HSP's gapped (non-prelim): 52
length of query: 747
length of database: 18,247,518
effective HSP length: 110
effective length of query: 637
effective length of database: 14,082,258
effective search space: 8970398346
effective search space used: 8970398346
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.