Guide to the Human Genome
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Name: N4BP3 Sequence: fasta or formatted (544aa) NCBI GI: 62177129
Description:

Nedd4 binding protein 3

Referenced in:

Additional Cell Cycle Functions
Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         51           2
 C cysteine            1.5          8           1
 D aspartate           3.1         17           2
 E glutamate          11.0         60           3
 F phenylalanine       2.4         13           1
 G glycine             8.1         44           2
 H histidine           1.7          9           1
 I isoleucine          1.1          6           1
 K lysine              4.4         24           2
 L leucine            12.3         67           2
 M methionine          1.3          7           1
 N asparagine          1.5          8           1
 P proline             7.7         42           4
 Q glutamine           7.2         39           2
 R arginine           10.3         56           2
 S serine              9.4         51           3
 T threonine           3.1         17           1
 V valine              2.0         11           1
 W tryptophan          0.9          5           1
 Y tyrosine            1.7          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nedd4 binding protein 3 
LZTS2                 0.161   leucine zipper, putative tumor suppressor 2 
ProSAPiP1             0.157   ProSAPiP1 protein 
LZTS1                 0.120   leucine zipper, putative tumor suppressor 1 
ZNF853                0.035   zinc finger protein 853 
CROCC                 0.035   ciliary rootlet coiled-coil 
INCENP                0.032   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.032   inner centromere protein antigens 135/155kDa isofor...
CEP250                0.031   centrosomal protein 2 
TCHH                  0.030   trichohyalin 
CDC42BPG              0.029   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
LOC283685             0.029   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC727832             0.028   golgi autoantigen, golgin subfamily a-like 
LOC100133220          0.028   PREDICTED: hypothetical protein 
ANKRD35               0.028   ankyrin repeat domain 35 
MYH14                 0.028   myosin, heavy chain 14 isoform 1 
MYH14                 0.028   myosin, heavy chain 14 isoform 2 
MYH14                 0.028   myosin, heavy chain 14 isoform 3 
LOC283767             0.028   golgi autoantigen, golgin subfamily a-like 
MLLT4                 0.027   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.026   myeloid/lymphoid or mixed-lineage leukemia (trithora...
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC400352             0.025   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.025   PREDICTED: similar to Putative golgin subfamily A m...
LOC645202             0.025   PREDICTED: hypothetical protein LOC645202 
FBF1                  0.025   Fas (TNFRSF6) binding factor 1 
LOC100133758          0.025   PREDICTED: hypothetical protein, partial 
LOC440243             0.025   PREDICTED: Putative golgin subfamily A member 6-lik...
PLEC1                 0.025   plectin 1 isoform 11 
PLEC1                 0.025   plectin 1 isoform 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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