Guide to the Human Genome
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Name: PCSK1N Sequence: fasta or formatted (260aa) NCBI GI: 7019519
Description:

proprotein convertase subtilisin/kexin type 1 inhibitor precursor

Referenced in:

Peptide-processing Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.8         49           3
 C cysteine            0.4          1           1
 D aspartate           6.2         16           3
 E glutamate           6.9         18           2
 F phenylalanine       0.8          2           1
 G glycine             8.1         21           2
 H histidine           0.8          2           1
 I isoleucine          0.4          1           1
 K lysine              0.8          2           1
 L leucine            15.8         41           4
 M methionine          0.4          1           1
 N asparagine          0.4          1           1
 P proline            13.1         34           3
 Q glutamine           3.5          9           2
 R arginine           11.9         31           2
 S serine              3.1          8           1
 T threonine           1.2          3           1
 V valine              6.2         16           1
 W tryptophan          0.8          2           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proprotein convertase subtilisin/kexin type 1 inhibit... 
GNAS                  0.037   GNAS complex locus XLas 
MAPK7                 0.037   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.037   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.037   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.037   mitogen-activated protein kinase 7 isoform 2 
LOC729370             0.029   PREDICTED: hypothetical protein 
APC2                  0.027   adenomatosis polyposis coli 2 
SLC38A10              0.025   solute carrier family 38, member 10 isoform a 
SAMD1                 0.025   sterile alpha motif domain containing 1 
KATNB1                0.025   katanin p80 subunit B 1 
BAT2D1                0.025   HBxAg transactivated protein 2 
RBM42                 0.023   RNA binding motif protein 42 
NRG1                  0.021   neuregulin 1 isoform GGF2 
LOC100293254          0.021   PREDICTED: hypothetical protein 
LOC100289377          0.021   PREDICTED: hypothetical protein 
LOC100289377          0.021   PREDICTED: hypothetical protein XP_002343119 
FSCB                  0.021   fibrous sheath CABYR binding protein 
CNTROB                0.021   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.021   centrobin, centrosomal BRCA2 interacting protein iso...
ANKRD56               0.021   ankyrin repeat domain 56 
RTN4                  0.021   reticulon 4 isoform B 
RTN4                  0.021   reticulon 4 isoform D 
RTN4                  0.021   reticulon 4 isoform A 
SH3BP1                0.021   SH3-domain binding protein 1 
FBRS                  0.018   fibrosin 
LOC390595             0.018   PREDICTED: similar to ubiquitin-associated protein ...
LOC100130883          0.018   PREDICTED: similar to proline rich 20 
LOC390595             0.018   PREDICTED: similar to ubiquitin-associated protein ...
LOC100130883          0.018   PREDICTED: similar to proline rich 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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