RPAP3 15218

Name: RPAP3	Sequence: fasta or formatted (665aa)		NCBI GI: 225735591
Description: RNA polymerase II associated protein 3 isoform 1		Referenced in: RNA Polymerase and General Transcription Factors Tetratricopeptide Domains
Other entries for this name: alt prot [631aa] RNA polymerase II associated protein 3 isoform 2 alt prot [506aa] RNA polymerase II associated protein 3 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 55 3 C cysteine 0.8 5 1 D aspartate 6.6 44 2 E glutamate 9.6 64 2 F phenylalanine 3.6 24 2 G glycine 3.8 25 2 H histidine 0.9 6 1 I isoleucine 5.6 37 2 K lysine 11.3 75 4 L leucine 8.9 59 3 M methionine 1.5 10 1 N asparagine 5.4 36 2 P proline 4.7 31 2 Q glutamine 5.6 37 2 R arginine 4.7 31 2 S serine 6.8 45 2 T threonine 4.5 30 2 V valine 3.9 26 2 W tryptophan 0.5 3 1 Y tyrosine 3.3 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA polymerase II associated protein 3 isoform 1 [H... RPAP3 0.930 RNA polymerase II associated protein 3 isoform 2 [H... RPAP3 0.753 RNA polymerase II associated protein 3 isoform 3 [H... TOMM34 0.069 translocase of outer mitochondrial membrane 34 [Homo... SPAG1 0.065 sperm associated antigen 1 SPAG1 0.065 sperm associated antigen 1 STIP1 0.061 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... SGTB 0.055 small glutamine-rich tetratricopeptide repeat (TPR)-... TOMM70A 0.053 translocase of outer mitochondrial membrane 70 homol... DNAJC7 0.046 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... PPP5C 0.044 protein phosphatase 5, catalytic subunit SGTA 0.044 small glutamine-rich tetratricopeptide TTC12 0.042 tetratricopeptide repeat domain 12 FKBP4 0.040 FK506 binding protein 52 TTC1 0.040 tetratricopeptide repeat domain 1 FKBP5 0.040 FK506 binding protein 5 isoform 1 FKBP5 0.040 FK506 binding protein 5 isoform 1 FKBP5 0.040 FK506 binding protein 5 isoform 1 DNAJC7 0.039 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... UNC45A 0.036 smooth muscle cell associated protein-1 isoform 3 [H... UNC45A 0.036 smooth muscle cell associated protein-1 isoform 2 [H... DNAJC3 0.033 DnaJ (Hsp40) homolog, subfamily C, member 3 TTC28 0.033 tetratricopeptide repeat domain 28 UNC45B 0.031 cardiomyopathy associated 4 isoform 2 UNC45B 0.031 cardiomyopathy associated 4 isoform 1 DYX1C1 0.029 dyslexia susceptibility 1 candidate 1 isoform a [Hom... FKBPL 0.029 WAF-1/CIP1 stabilizing protein 39 TTC6 0.028 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.028 PREDICTED: tetratricopeptide repeat domain 6 C14orf25 0.028 PREDICTED: chromosome 14 open reading frame 25 [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.