Guide to the Human Genome
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Name: FKBPL Sequence: fasta or formatted (349aa) NCBI GI: 17149853
Description:

WAF-1/CIP1 stabilizing protein 39

Referenced in:

Peptidylprolyl Isomerases
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         31           2
 C cysteine            2.3          8           2
 D aspartate           3.7         13           1
 E glutamate          10.6         37           2
 F phenylalanine       1.7          6           1
 G glycine             9.5         33           1
 H histidine           2.0          7           1
 I isoleucine          2.6          9           1
 K lysine              5.2         18           2
 L leucine            12.6         44           3
 M methionine          1.4          5           1
 N asparagine          2.3          8           1
 P proline             7.7         27           3
 Q glutamine           6.3         22           2
 R arginine            6.3         22           2
 S serine              5.2         18           1
 T threonine           4.9         17           1
 V valine              4.3         15           2
 W tryptophan          1.7          6           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAF-1/CIP1 stabilizing protein 39 
FKBP4                 0.099   FK506 binding protein 52 
FKBP5                 0.095   FK506 binding protein 5 isoform 1 
FKBP5                 0.095   FK506 binding protein 5 isoform 1 
FKBP5                 0.095   FK506 binding protein 5 isoform 1 
UNC45A                0.082   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.082   smooth muscle cell associated protein-1 isoform 2 [H...
SPAG1                 0.080   sperm associated antigen 1 
SPAG1                 0.080   sperm associated antigen 1 
FKBP8                 0.066   FK506-binding protein 8 
TOMM34                0.063   translocase of outer mitochondrial membrane 34 [Homo...
RPAP3                 0.054   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.054   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.054   RNA polymerase II associated protein 3 isoform 1 [H...
AIP                   0.054   aryl hydrocarbon receptor interacting protein [Homo...
PPID                  0.049   peptidylprolyl isomerase D 
TTC1                  0.048   tetratricopeptide repeat domain 1 
SGTA                  0.047   small glutamine-rich tetratricopeptide 
SGTB                  0.044   small glutamine-rich tetratricopeptide repeat (TPR)-...
AIPL1                 0.044   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.044   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.044   aryl hydrocarbon receptor interacting protein-like 1...
STIP1                 0.039   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
TOMM70A               0.036   translocase of outer mitochondrial membrane 70 homol...
UNC45B                0.036   cardiomyopathy associated 4 isoform 2 
UNC45B                0.036   cardiomyopathy associated 4 isoform 1 
STUB1                 0.035   STIP1 homology and U-box containing protein 1 
PPP5C                 0.031   protein phosphatase 5, catalytic subunit 
DYX1C1                0.031   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
TANC1                 0.028   tetratricopeptide repeat, ankyrin repeat and coiled...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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