Guide to the Human Genome
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Name: STIP1 Sequence: fasta or formatted (543aa) NCBI GI: 5803181
Description:

stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)

Referenced in:

Heat-Shock Proteins and Chaperonins
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         51           3
 C cysteine            2.0         11           1
 D aspartate           7.0         38           2
 E glutamate          10.1         55           4
 F phenylalanine       2.0         11           1
 G glycine             3.7         20           1
 H histidine           1.7          9           1
 I isoleucine          3.9         21           1
 K lysine             11.6         63           3
 L leucine             9.4         51           2
 M methionine          3.3         18           2
 N asparagine          5.2         28           2
 P proline             5.5         30           7
 Q glutamine           5.2         28           2
 R arginine            5.0         27           2
 S serine              3.3         18           2
 T threonine           3.7         20           2
 V valine              2.6         14           1
 W tryptophan          0.2          1           1
 Y tyrosine            5.3         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 
SPAG1                 0.085   sperm associated antigen 1 
SPAG1                 0.085   sperm associated antigen 1 
RPAP3                 0.072   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.072   RNA polymerase II associated protein 3 isoform 1 [H...
SGTB                  0.059   small glutamine-rich tetratricopeptide repeat (TPR)-...
TOMM70A               0.058   translocase of outer mitochondrial membrane 70 homol...
TTC28                 0.056   tetratricopeptide repeat domain 28 
RPAP3                 0.053   RNA polymerase II associated protein 3 isoform 3 [H...
SGTA                  0.052   small glutamine-rich tetratricopeptide 
DNAJC7                0.050   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.050   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
OGT                   0.050   O-linked GlcNAc transferase isoform 2 
OGT                   0.050   O-linked GlcNAc transferase isoform 1 
TTC12                 0.050   tetratricopeptide repeat domain 12 
PPP5C                 0.045   protein phosphatase 5, catalytic subunit 
TTC1                  0.043   tetratricopeptide repeat domain 1 
TOMM34                0.042   translocase of outer mitochondrial membrane 34 [Homo...
TTC3                  0.039   tetratricopeptide repeat domain 3 
TTC3                  0.039   tetratricopeptide repeat domain 3 
STUB1                 0.036   STIP1 homology and U-box containing protein 1 
LONRF3                0.036   LON peptidase N-terminal domain and ring finger 3 is...
DYX1C1                0.034   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
UNC45A                0.033   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.033   smooth muscle cell associated protein-1 isoform 2 [H...
TTC31                 0.032   tetratricopeptide repeat domain 31 
TTC14                 0.032   tetratricopeptide repeat domain 14 isoform a 
DNAJC3                0.031   DnaJ (Hsp40) homolog, subfamily C, member 3 
TTC25                 0.031   tetratricopeptide repeat domain 25 
WDTC1                 0.030   WD and tetratricopeptide repeats 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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