Guide to the Human Genome
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Name: LOC100291999 Sequence: fasta or formatted (117aa) NCBI GI: 239755963
Description:

PREDICTED: similar to hCG2019585

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         13           3
 C cysteine            7.7          9           2
 D aspartate           2.6          3           1
 E glutamate           3.4          4           2
 F phenylalanine       1.7          2           1
 G glycine            13.7         16           3
 H histidine           5.1          6           1
 I isoleucine          2.6          3           1
 K lysine              3.4          4           1
 L leucine             7.7          9           2
 M methionine          2.6          3           1
 N asparagine          0.9          1           1
 P proline             6.0          7           2
 Q glutamine           6.8          8           2
 R arginine            6.8          8           1
 S serine              5.1          6           1
 T threonine           5.1          6           1
 V valine              4.3          5           2
 W tryptophan          3.4          4           2
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG2019585 
LOC100290916          1.000   PREDICTED: hypothetical protein XP_002347420 
LOC100287114          1.000   PREDICTED: hypothetical protein XP_002343271 
TTC34                 0.047   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
TTC34                 0.047   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
BATF2                 0.034   basic leucine zipper transcription factor, ATF-like ...
C17orf55              0.030   hypothetical protein LOC284185 
HR                    0.013   hairless protein isoform a 
HR                    0.013   hairless protein isoform b 
TNKS1BP1              0.013   tankyrase 1-binding protein 1 
TUT1                  0.013   terminal uridylyl transferase 1, U6 snRNA-specific ...
LOC100287807          0.013   PREDICTED: hypothetical protein 
LOC100287807          0.013   PREDICTED: hypothetical protein XP_002342309 
GFI1                  0.009   growth factor independent 1 
GFI1                  0.009   growth factor independent 1 
GFI1                  0.009   growth factor independent 1 
GPR25                 0.009   G protein-coupled receptor 25 
GPRIN2                0.009   G protein-regulated inducer of neurite outgrowth 2 ...
MAST4                 0.009   microtubule associated serine/threonine kinase famil...
SDF2                  0.009   stromal cell-derived factor 2 precursor 
ACLY                  0.009   ATP citrate lyase isoform 2 
ACLY                  0.009   ATP citrate lyase isoform 1 
LOC645446             0.009   PREDICTED: hypothetical protein 
LOC645446             0.009   PREDICTED: hypothetical protein 
LOC645446             0.009   PREDICTED: hypothetical protein 
LOC727804             0.009   PREDICTED: hypothetical protein 
TNFRSF14              0.009   tumor necrosis factor receptor superfamily, member 1...
KIAA1409              0.009   hypothetical protein LOC57578 
LCE4A                 0.004   late cornified envelope 4A 
PRMT2                 0.004   HMT1 hnRNP methyltransferase-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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