Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TTC26 Sequence: fasta or formatted (487aa) NCBI GI: 222136605
Description:

tetratricopeptide repeat domain 26 isoform 2

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [523aa] tetratricopeptide repeat domain 26 isoform 3
alt prot [554aa] tetratricopeptide repeat domain 26 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         41           2
 C cysteine            2.1         10           1
 D aspartate           5.3         26           2
 E glutamate           7.8         38           4
 F phenylalanine       5.1         25           2
 G glycine             4.5         22           2
 H histidine           2.5         12           1
 I isoleucine          4.5         22           1
 K lysine              7.2         35           3
 L leucine            12.1         59           2
 M methionine          2.5         12           2
 N asparagine          5.3         26           1
 P proline             2.5         12           2
 Q glutamine           4.7         23           2
 R arginine            5.1         25           1
 S serine              6.0         29           3
 T threonine           3.1         15           2
 V valine              4.5         22           2
 W tryptophan          0.8          4           1
 Y tyrosine            6.0         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 26 isoform 2 
TTC26                 0.969   tetratricopeptide repeat domain 26 isoform 1 
TTC26                 0.881   tetratricopeptide repeat domain 26 isoform 3 
BBS4                  0.018   Bardet-Biedl syndrome 4 
STIP1                 0.009   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
PDCD11                0.009   programmed cell death 11 
ID1                   0.008   inhibitor of DNA binding 1 isoform a 
ID1                   0.008   inhibitor of DNA binding 1 isoform b 
TELO2                 0.007   TEL2, telomere maintenance 2, homolog 
TTC7B                 0.007   tetratricopeptide repeat domain 7B 
TTC18                 0.007   tetratricopeptide repeat domain 18 
TTC8                  0.007   tetratricopeptide repeat domain 8 isoform A 
TTC8                  0.007   tetratricopeptide repeat domain 8 isoform C 
TTC8                  0.007   tetratricopeptide repeat domain 8 isoform B 
TTC21B                0.007   tetratricopeptide repeat domain 21B 
TTC37                 0.006   tetratricopeptide repeat domain 37 
TTC6                  0.005   PREDICTED: tetratricopeptide repeat domain 6 
TTC34                 0.005   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
TTC6                  0.005   PREDICTED: tetratricopeptide repeat domain 6 
TTC34                 0.005   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
C14orf25              0.005   PREDICTED: chromosome 14 open reading frame 25 [Hom...
SPAG1                 0.005   sperm associated antigen 1 
SPAG1                 0.005   sperm associated antigen 1 
IFT88                 0.005   intraflagellar transport 88 homolog isoform 1 
IFT88                 0.005   intraflagellar transport 88 homolog isoform 2 
TOMM34                0.005   translocase of outer mitochondrial membrane 34 [Homo...
TTC22                 0.005   tetratricopeptide repeat domain 22 isoform 1 
TTC22                 0.005   tetratricopeptide repeat domain 22 isoform 2 
TMTC2                 0.005   transmembrane and tetratricopeptide repeat containin...
KDM6A                 0.004   ubiquitously transcribed tetratricopeptide repeat, ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press