Guide to the Human Genome
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Name: TTC34 Sequence: fasta or formatted (747aa) NCBI GI: 169161714
Description:

PREDICTED: tetratricopeptide repeat domain 34

Referenced in:

Tetratricopeptide Domains

Other entries for this name:
alt prot [901aa] PREDICTED: tetratricopeptide repeat domain 34
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            17.4        130           2
 C cysteine            2.7         20           1
 D aspartate           4.3         32           1
 E glutamate           5.9         44           2
 F phenylalanine       3.2         24           2
 G glycine             7.9         59           2
 H histidine           3.2         24           1
 I isoleucine          0.9          7           1
 K lysine              0.9          7           2
 L leucine            15.0        112           3
 M methionine          1.1          8           2
 N asparagine          0.8          6           1
 P proline             4.7         35           2
 Q glutamine           5.9         44           2
 R arginine            9.9         74           2
 S serine              5.2         39           2
 T threonine           3.5         26           2
 V valine              5.6         42           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: tetratricopeptide repeat domain 34 [Homo... 
TTC34                 1.000   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
LOC100287898          0.294   PREDICTED: hypothetical protein XP_002342056 
RPAP3                 0.008   RNA polymerase II associated protein 3 isoform 3 [H...
RPAP3                 0.008   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.008   RNA polymerase II associated protein 3 isoform 1 [H...
FKBPL                 0.008   WAF-1/CIP1 stabilizing protein 39 
LOC100291999          0.008   PREDICTED: similar to hCG2019585 
LOC100290916          0.008   PREDICTED: hypothetical protein XP_002347420 
LOC100287114          0.008   PREDICTED: hypothetical protein XP_002343271 
DLGAP1                0.006   discs large homolog-associated protein 1 isoform alp...
DLGAP1                0.006   discs large homolog-associated protein 1 isoform bet...
PCDHGB3               0.006   protocadherin gamma subfamily B, 3 isoform 2 precurs...
PCDHGB3               0.006   protocadherin gamma subfamily B, 3 isoform 1 precurs...
STIP1                 0.005   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
N4BP3                 0.005   Nedd4 binding protein 3 
HTRA1                 0.005   HtrA serine peptidase 1 precursor 
PCSK1N                0.005   proprotein convertase subtilisin/kexin type 1 inhibit...
LOC100290372          0.004   PREDICTED: hypothetical protein XP_002346788 
LOC100288606          0.004   PREDICTED: hypothetical protein XP_002342652 
LYL1                  0.004   lymphoblastic leukemia derived sequence 1 
SPAG1                 0.004   sperm associated antigen 1 
SPAG1                 0.004   sperm associated antigen 1 
LRRC26                0.003   leucine rich repeat containing 26 
ANGPTL6               0.003   angiopoietin-like 6 
TTC26                 0.003   tetratricopeptide repeat domain 26 isoform 1 
TTC26                 0.003   tetratricopeptide repeat domain 26 isoform 2 
BRD4                  0.003   bromodomain-containing protein 4 isoform long 
NOTCH4                0.003   notch4 preproprotein 
F8A1                  0.003   coagulation factor VIII-associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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