Guide to the Human Genome
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Name: SPAG1 Sequence: fasta or formatted (926aa) NCBI GI: 27262638
Description:

sperm associated antigen 1

Referenced in:

Testes and Sperm
Tetratricopeptide Domains

Other entries for this name:
alt mRNA [926aa] sperm associated antigen 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         88           5
 C cysteine            2.2         20           1
 D aspartate           5.6         52           2
 E glutamate          10.3         95           2
 F phenylalanine       2.6         24           1
 G glycine             6.2         57           3
 H histidine           1.8         17           1
 I isoleucine          4.5         42           2
 K lysine             10.7         99           3
 L leucine             9.8         91           3
 M methionine          1.6         15           2
 N asparagine          4.5         42           2
 P proline             4.6         43           2
 Q glutamine           3.9         36           2
 R arginine            4.6         43           2
 S serine              6.0         56           3
 T threonine           4.4         41           2
 V valine              3.1         29           2
 W tryptophan          0.8          7           1
 Y tyrosine            3.1         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm associated antigen 1 
SPAG1                 1.000   sperm associated antigen 1 
TOMM34                0.134   translocase of outer mitochondrial membrane 34 [Homo...
STIP1                 0.050   stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi...
RPAP3                 0.049   RNA polymerase II associated protein 3 isoform 2 [H...
RPAP3                 0.046   RNA polymerase II associated protein 3 isoform 1 [H...
RPAP3                 0.040   RNA polymerase II associated protein 3 isoform 3 [H...
TTC1                  0.035   tetratricopeptide repeat domain 1 
TOMM70A               0.035   translocase of outer mitochondrial membrane 70 homol...
FKBPL                 0.030   WAF-1/CIP1 stabilizing protein 39 
ST13                  0.027   heat shock 70kD protein binding protein 
FKBP4                 0.027   FK506 binding protein 52 
TTC12                 0.026   tetratricopeptide repeat domain 12 
UNC45A                0.025   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.025   smooth muscle cell associated protein-1 isoform 2 [H...
SGTB                  0.025   small glutamine-rich tetratricopeptide repeat (TPR)-...
DYX1C1                0.025   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
SGTA                  0.025   small glutamine-rich tetratricopeptide 
PPP5C                 0.024   protein phosphatase 5, catalytic subunit 
FKBP5                 0.023   FK506 binding protein 5 isoform 1 
FKBP5                 0.023   FK506 binding protein 5 isoform 1 
FKBP5                 0.023   FK506 binding protein 5 isoform 1 
DNAJC7                0.023   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
DNAJC7                0.022   DnaJ (Hsp40) homolog, subfamily C, member 7 isoform...
FKBP8                 0.022   FK506-binding protein 8 
STUB1                 0.021   STIP1 homology and U-box containing protein 1 
UNC45B                0.021   cardiomyopathy associated 4 isoform 2 
UNC45B                0.021   cardiomyopathy associated 4 isoform 1 
TTC4                  0.021   tetratricopeptide repeat domain 4 
TTC28                 0.020   tetratricopeptide repeat domain 28 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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