RPAP3 15219

Name: RPAP3	Sequence: fasta or formatted (631aa)		NCBI GI: 225735593
Description: RNA polymerase II associated protein 3 isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [665aa] RNA polymerase II associated protein 3 isoform 1 alt prot [506aa] RNA polymerase II associated protein 3 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 55 3 C cysteine 0.8 5 1 D aspartate 6.3 40 2 E glutamate 9.8 62 2 F phenylalanine 3.6 23 2 G glycine 3.6 23 2 H histidine 0.6 4 1 I isoleucine 5.5 35 2 K lysine 11.6 73 4 L leucine 9.0 57 3 M methionine 1.6 10 1 N asparagine 5.4 34 2 P proline 4.3 27 2 Q glutamine 5.5 35 2 R arginine 4.8 30 2 S serine 6.8 43 2 T threonine 4.4 28 2 V valine 3.6 23 1 W tryptophan 0.3 2 1 Y tyrosine 3.5 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA polymerase II associated protein 3 isoform 2 [H... RPAP3 0.986 RNA polymerase II associated protein 3 isoform 1 [H... RPAP3 0.724 RNA polymerase II associated protein 3 isoform 3 [H... SPAG1 0.073 sperm associated antigen 1 SPAG1 0.073 sperm associated antigen 1 TOMM34 0.073 translocase of outer mitochondrial membrane 34 [Homo... STIP1 0.064 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... SGTB 0.059 small glutamine-rich tetratricopeptide repeat (TPR)-... TOMM70A 0.056 translocase of outer mitochondrial membrane 70 homol... DNAJC7 0.051 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... PPP5C 0.047 protein phosphatase 5, catalytic subunit SGTA 0.046 small glutamine-rich tetratricopeptide TTC12 0.045 tetratricopeptide repeat domain 12 TTC1 0.043 tetratricopeptide repeat domain 1 FKBP5 0.042 FK506 binding protein 5 isoform 1 FKBP5 0.042 FK506 binding protein 5 isoform 1 FKBP5 0.042 FK506 binding protein 5 isoform 1 DNAJC7 0.041 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... FKBP4 0.040 FK506 binding protein 52 TTC28 0.037 tetratricopeptide repeat domain 28 UNC45A 0.036 smooth muscle cell associated protein-1 isoform 3 [H... UNC45A 0.036 smooth muscle cell associated protein-1 isoform 2 [H... DNAJC3 0.035 DnaJ (Hsp40) homolog, subfamily C, member 3 UNC45B 0.033 cardiomyopathy associated 4 isoform 2 UNC45B 0.033 cardiomyopathy associated 4 isoform 1 DYX1C1 0.031 dyslexia susceptibility 1 candidate 1 isoform a [Hom... FKBPL 0.031 WAF-1/CIP1 stabilizing protein 39 STUB1 0.028 STIP1 homology and U-box containing protein 1 TTC6 0.028 PREDICTED: tetratricopeptide repeat domain 6 TTC6 0.028 PREDICTED: tetratricopeptide repeat domain 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.