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Search of human proteins with 167466169
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|167466169 growth arrest-specific 1 [Homo sapiens]
(345 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|167466169 growth arrest-specific 1 [Homo sapiens] 730 0.0
gi|229577180 MPN domain containing isoform 2 [Homo sapiens] 43 5e-04
gi|31542699 MPN domain containing isoform 1 [Homo sapiens] 43 5e-04
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 37 0.020
gi|4503119 cancer/testis antigen 1B [Homo sapiens] 37 0.020
gi|22749459 glypican 2 [Homo sapiens] 37 0.020
gi|21281685 cancer/testis antigen 1A [Homo sapiens] 37 0.020
gi|12707580 paired-like homeobox 2b [Homo sapiens] 37 0.026
gi|156151396 heterogeneous nuclear ribonucleoprotein R isoform 3... 37 0.026
gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1... 37 0.026
gi|156151392 heterogeneous nuclear ribonucleoprotein R isoform 4... 37 0.026
gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2 [... 37 0.026
gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding pro... 36 0.044
gi|47132620 keratin 2 [Homo sapiens] 36 0.058
gi|124430752 kinesin family member 26B [Homo sapiens] 36 0.058
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 35 0.075
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 35 0.098
gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] 35 0.098
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 35 0.098
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 35 0.13
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 34 0.17
gi|164419758 bromodomain containing 2 [Homo sapiens] 34 0.17
gi|4826806 bromodomain containing 2 [Homo sapiens] 34 0.17
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 34 0.17
gi|4758392 forkhead box D1 [Homo sapiens] 34 0.17
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 34 0.17
gi|23510333 pygopus homolog 2 [Homo sapiens] 34 0.17
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 34 0.17
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 34 0.17
gi|119395750 keratin 1 [Homo sapiens] 34 0.22
>gi|167466169 growth arrest-specific 1 [Homo sapiens]
Length = 345
Score = 730 bits (1885), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MVAALLGGGGEARGGTVPGAWLCLMALLQLLGSAPRGSGLAHGRRLICWQALLQCQGEPE 60
MVAALLGGGGEARGGTVPGAWLCLMALLQLLGSAPRGSGLAHGRRLICWQALLQCQGEPE
Sbjct: 1 MVAALLGGGGEARGGTVPGAWLCLMALLQLLGSAPRGSGLAHGRRLICWQALLQCQGEPE 60
Query: 61 CSYAYNQYAEACAPVLAQHGGGDAPGAAAAAFPASAASFSSRWRCPSHCISALIQLNHTR 120
CSYAYNQYAEACAPVLAQHGGGDAPGAAAAAFPASAASFSSRWRCPSHCISALIQLNHTR
Sbjct: 61 CSYAYNQYAEACAPVLAQHGGGDAPGAAAAAFPASAASFSSRWRCPSHCISALIQLNHTR 120
Query: 121 RGPALEDCDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCN 180
RGPALEDCDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCN
Sbjct: 121 RGPALEDCDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEARRRCDRDSRCN 180
Query: 181 LALSRYLTYCGKVFNGLRCTDECRTVIEDMLAMPKAALLNDCVCDGLERPICESVKENMA 240
LALSRYLTYCGKVFNGLRCTDECRTVIEDMLAMPKAALLNDCVCDGLERPICESVKENMA
Sbjct: 181 LALSRYLTYCGKVFNGLRCTDECRTVIEDMLAMPKAALLNDCVCDGLERPICESVKENMA 240
Query: 241 RLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGA 300
RLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGA
Sbjct: 241 RLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGA 300
Query: 301 AASGGRGDLPYGPGRRSSGGGGRLAPRGAWTPLASILLLLLGPLF 345
AASGGRGDLPYGPGRRSSGGGGRLAPRGAWTPLASILLLLLGPLF
Sbjct: 301 AASGGRGDLPYGPGRRSSGGGGRLAPRGAWTPLASILLLLLGPLF 345
>gi|229577180 MPN domain containing isoform 2 [Homo sapiens]
Length = 451
Score = 42.7 bits (99), Expect = 5e-04
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 276 GGAGGEQPLDDDDGV----PHPPRPGSGAAASGGRGD-LPYGPGRRSSGGGGRLAPRGAW 330
GGAG E P +D+D P P G+G SGG G + G G +G GG P GA
Sbjct: 11 GGAGEEAPEEDEDEAEAEDPERPNAGAGGGRSGGGGSSVSGGGGGGGAGAGGCGGPGGAL 70
Query: 331 TPLASILLLLL 341
T A L +LL
Sbjct: 71 TRRAVTLRVLL 81
>gi|31542699 MPN domain containing isoform 1 [Homo sapiens]
Length = 471
Score = 42.7 bits (99), Expect = 5e-04
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 276 GGAGGEQPLDDDDGV----PHPPRPGSGAAASGGRGD-LPYGPGRRSSGGGGRLAPRGAW 330
GGAG E P +D+D P P G+G SGG G + G G +G GG P GA
Sbjct: 11 GGAGEEAPEEDEDEAEAEDPERPNAGAGGGRSGGGGSSVSGGGGGGGAGAGGCGGPGGAL 70
Query: 331 TPLASILLLLL 341
T A L +LL
Sbjct: 71 TRRAVTLRVLL 81
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 37.4 bits (85), Expect = 0.020
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 9/93 (9%)
Query: 245 GAELGNGPGS---SGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDD-----DDGVPHPPRP 296
G +GN G G GG+ + GG GG +P + G H P
Sbjct: 758 GGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHE 817
Query: 297 GSGAAASGGRGDLPY-GPGRRSSGGGGRLAPRG 328
G G G G P+ GPG G GG G
Sbjct: 818 GPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEG 850
Score = 32.7 bits (73), Expect = 0.49
Identities = 27/87 (31%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASG 304
G + GP G G Y+ + GG GG +P P PP P GA
Sbjct: 684 GDPMRGGPMRGGPGPGPGPYH-------RGRGGRGGNEP-------PPPPPPFRGARGGR 729
Query: 305 GRGDLPYG---PGRRSSGGGGRLAPRG 328
G P G PG GGGG G
Sbjct: 730 SGGGPPNGRGGPGGGMVGGGGHRPHEG 756
>gi|4503119 cancer/testis antigen 1B [Homo sapiens]
Length = 180
Score = 37.4 bits (85), Expect = 0.020
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 275 TGGAGGEQPLDDDDGVPHPPRPGSG----AAASGGRGDLPYGPGRRSSGGGGRLAPRG 328
TGG+ G+ G+P P +G A A+GGRG G R S GGG APRG
Sbjct: 8 TGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGG--APRG 63
Score = 28.5 bits (62), Expect = 9.2
Identities = 31/93 (33%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 251 GPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLP 310
G G+ GS G D D G AGG G PR A ASG G P
Sbjct: 5 GRGTGGSTGDADGPGGPGIPDGPG-GNAGGPGEAGATGG--RGPRGAGAARASGPGGGAP 61
Query: 311 YGP-GRRSSGGGG--RLAPRGAWTPLASILLLL 340
GP G +SG G R RG + L L +
Sbjct: 62 RGPHGGAASGLNGCCRCGARGPESRLLEFYLAM 94
>gi|22749459 glypican 2 [Homo sapiens]
Length = 579
Score = 37.4 bits (85), Expect = 0.020
Identities = 32/88 (36%), Positives = 36/88 (40%), Gaps = 20/88 (22%)
Query: 271 DEQRTGGAGGEQPLDD-----------DDGVPHPPRPGSGAAASGGRGDLPYGPGRRSSG 319
DE +G GG+Q DD P+PPR G+ GG G Y GR SG
Sbjct: 496 DEDASGSGGGQQYADDWMAGAVAPPARPPRPPYPPRR-DGSGGKGGGGSARYNQGRSRSG 554
Query: 320 GGGRLAPRGAWTPLASIL----LLLLGP 343
G A G T IL L LLGP
Sbjct: 555 G----ASIGFHTQTILILSLSALALLGP 578
>gi|21281685 cancer/testis antigen 1A [Homo sapiens]
Length = 180
Score = 37.4 bits (85), Expect = 0.020
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 275 TGGAGGEQPLDDDDGVPHPPRPGSG----AAASGGRGDLPYGPGRRSSGGGGRLAPRG 328
TGG+ G+ G+P P +G A A+GGRG G R S GGG APRG
Sbjct: 8 TGGSTGDADGPGGPGIPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPGGG--APRG 63
Score = 28.5 bits (62), Expect = 9.2
Identities = 31/93 (33%), Positives = 35/93 (37%), Gaps = 6/93 (6%)
Query: 251 GPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLP 310
G G+ GS G D D G AGG G PR A ASG G P
Sbjct: 5 GRGTGGSTGDADGPGGPGIPDGPG-GNAGGPGEAGATGG--RGPRGAGAARASGPGGGAP 61
Query: 311 YGP-GRRSSGGGG--RLAPRGAWTPLASILLLL 340
GP G +SG G R RG + L L +
Sbjct: 62 RGPHGGAASGLNGCCRCGARGPESRLLEFYLAM 94
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 37.0 bits (84), Expect = 0.026
Identities = 31/90 (34%), Positives = 33/90 (36%), Gaps = 14/90 (15%)
Query: 236 KENMARLCFGAELGNGPGSSGSDGGLDDYYDEDYD-DEQRTGGAGGEQPLDDDDGVPHP- 293
K+ A A NG SD DD E D TGG G P+P
Sbjct: 155 KQERAAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPG-----------PNPN 203
Query: 294 PRPGSGAAASGGRGDLPYG-PGRRSSGGGG 322
P P GA GG G P G PG GG G
Sbjct: 204 PTPSCGANGGGGGGPSPAGAPGAAGPGGPG 233
>gi|156151396 heterogeneous nuclear ribonucleoprotein R isoform 3
[Homo sapiens]
Length = 535
Score = 37.0 bits (84), Expect = 0.026
Identities = 29/72 (40%), Positives = 31/72 (43%), Gaps = 16/72 (22%)
Query: 259 GGLDDYY---DEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRG-----DLP 310
GG +D Y D+ Y R GG GG G P PPR G GA GR P
Sbjct: 386 GGYEDPYYGYDDGYAVRGRGGGRGGR-------GAPPPPR-GRGAPPPRGRAGYSQRGAP 437
Query: 311 YGPGRRSSGGGG 322
GP R S GG G
Sbjct: 438 LGPPRGSRGGRG 449
>gi|156151394 heterogeneous nuclear ribonucleoprotein R isoform 1
[Homo sapiens]
Length = 636
Score = 37.0 bits (84), Expect = 0.026
Identities = 29/72 (40%), Positives = 31/72 (43%), Gaps = 16/72 (22%)
Query: 259 GGLDDYY---DEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRG-----DLP 310
GG +D Y D+ Y R GG GG G P PPR G GA GR P
Sbjct: 487 GGYEDPYYGYDDGYAVRGRGGGRGGR-------GAPPPPR-GRGAPPPRGRAGYSQRGAP 538
Query: 311 YGPGRRSSGGGG 322
GP R S GG G
Sbjct: 539 LGPPRGSRGGRG 550
>gi|156151392 heterogeneous nuclear ribonucleoprotein R isoform 4
[Homo sapiens]
Length = 532
Score = 37.0 bits (84), Expect = 0.026
Identities = 29/72 (40%), Positives = 31/72 (43%), Gaps = 16/72 (22%)
Query: 259 GGLDDYY---DEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRG-----DLP 310
GG +D Y D+ Y R GG GG G P PPR G GA GR P
Sbjct: 383 GGYEDPYYGYDDGYAVRGRGGGRGGR-------GAPPPPR-GRGAPPPRGRAGYSQRGAP 434
Query: 311 YGPGRRSSGGGG 322
GP R S GG G
Sbjct: 435 LGPPRGSRGGRG 446
>gi|5031755 heterogeneous nuclear ribonucleoprotein R isoform 2
[Homo sapiens]
Length = 633
Score = 37.0 bits (84), Expect = 0.026
Identities = 29/72 (40%), Positives = 31/72 (43%), Gaps = 16/72 (22%)
Query: 259 GGLDDYY---DEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRG-----DLP 310
GG +D Y D+ Y R GG GG G P PPR G GA GR P
Sbjct: 484 GGYEDPYYGYDDGYAVRGRGGGRGGR-------GAPPPPR-GRGAPPPRGRAGYSQRGAP 535
Query: 311 YGPGRRSSGGGG 322
GP R S GG G
Sbjct: 536 LGPPRGSRGGRG 547
>gi|187761373 ariadne ubiquitin-conjugating enzyme E2 binding
protein homolog 1 [Homo sapiens]
Length = 557
Score = 36.2 bits (82), Expect = 0.044
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 17/83 (20%)
Query: 257 SDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDD--------GVPHPPRPGSGAAA------ 302
SD G + +DED + + GA E+ DDD+ G PG G
Sbjct: 3 SDEGYNYEFDEDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDGLL 62
Query: 303 ---SGGRGDLPYGPGRRSSGGGG 322
+GG G GPG GGGG
Sbjct: 63 CGETGGGGGSALGPGGGGGGGGG 85
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 35.8 bits (81), Expect = 0.058
Identities = 29/97 (29%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 234 SVKENMA-RLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDD---DG 289
++ N+A + FG G G S G Y GG+GG + G
Sbjct: 507 TISSNVASKAAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSG 566
Query: 290 VPHPPRPGSGAAASGGR---GDLPYGPGRRSSGGGGR 323
R GSG + GG G G G+ SSGGG R
Sbjct: 567 GGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSR 603
Score = 28.5 bits (62), Expect = 9.2
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASG 304
G+ G+G G S S GG Y R G GG + G + G ++ G
Sbjct: 547 GSRGGSGGGGSISGGG----YGSGGGSGGRYGSGGGSKG-GSISGGGYGSGGGKHSSGGG 601
Query: 305 GRGDLPYGPGRRSSGGG 321
RG G G S GGG
Sbjct: 602 SRGGSSSGGGYGSGGGG 618
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 35.8 bits (81), Expect = 0.058
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 277 GAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLP-YGPGRRSSGGGGRLAP---RGAW 330
G+G P G P P PG G ++ G G P +G G SG GG +P RG W
Sbjct: 72 GSGTSSP-SSFTGSPGPASPGIGTSSPGSLGGSPGFGTGSPGSGSGGGSSPGSDRGVW 128
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 35.4 bits (80), Expect = 0.075
Identities = 28/85 (32%), Positives = 30/85 (35%), Gaps = 9/85 (10%)
Query: 250 NGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDD------GVPHPPRPGSGAAAS 303
N G GG Y +D GG+GG D G R G G S
Sbjct: 162 NSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGS 221
Query: 304 GGRGDLPYGPGRRSSGGGGRLAPRG 328
GG G G RSSGG PRG
Sbjct: 222 GGGGGGGGGGYNRSSGG---YEPRG 243
Score = 31.2 bits (69), Expect = 1.4
Identities = 25/81 (30%), Positives = 27/81 (33%), Gaps = 5/81 (6%)
Query: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASG 304
G G S S GG Y + +Q GG G D G G G G
Sbjct: 174 GGNYGQDQSSMSSGGGSGGGYG---NQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGG 230
Query: 305 G--RGDLPYGPGRRSSGGGGR 323
G R Y P R G GGR
Sbjct: 231 GYNRSSGGYEPRGRGGGRGGR 251
Score = 30.0 bits (66), Expect = 3.2
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 24/92 (26%)
Query: 79 HGGGDAPGAAAAAFPASAASFSSR-----WRCPSHCISALIQLNHTRRGPALEDCDCAQD 133
+GGG + G FP+ + W+CP+ +N + R +C Q
Sbjct: 397 YGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCE---NMNFSWRN------ECNQ- 446
Query: 134 ENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMG 165
CK+ K P GGG GG GG G
Sbjct: 447 --CKAPK-------PDGPGGGPGGSHMGGNYG 469
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 35.0 bits (79), Expect = 0.098
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 252 PGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLPY 311
PG++G G + + G GE+ + G P P P GAA GR +P
Sbjct: 473 PGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGP-RGAAGEPGRDGVPG 531
Query: 312 GPGRR----SSGGGG 322
GPG R S GG G
Sbjct: 532 GPGMRGMPGSPGGPG 546
Score = 33.9 bits (76), Expect = 0.22
Identities = 26/76 (34%), Positives = 27/76 (35%), Gaps = 13/76 (17%)
Query: 252 PGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDL-P 310
PG GS GG D G G G P PP P A SG RG+ P
Sbjct: 1022 PGRDGSPGGKGDR------------GENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGP 1069
Query: 311 YGPGRRSSGGGGRLAP 326
GP G R AP
Sbjct: 1070 AGPAGAPGPAGSRGAP 1085
Score = 32.0 bits (71), Expect = 0.83
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 252 PGSSGSDGGLDDYYDEDYDDEQRTGGAG--GEQPLDDDDGVPHPPRPGSGAAASGGRGDL 309
PG G G +D ++ TG G GE L ++G P P P GA GR L
Sbjct: 260 PGMKGHRG-----FDGRNGEKGETGAPGLKGENGLPGENGAPGPMGP-RGAPGERGRPGL 313
Query: 310 PYGPGRRSSGG 320
P G R + G
Sbjct: 314 PGAAGARGNDG 324
Score = 30.0 bits (66), Expect = 3.2
Identities = 25/87 (28%), Positives = 28/87 (32%), Gaps = 11/87 (12%)
Query: 252 PGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLPY 311
PG +G G D Q G GG + G P P A GG+GD
Sbjct: 620 PGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAG- 678
Query: 312 GPGRRS----------SGGGGRLAPRG 328
PG R GG G P G
Sbjct: 679 APGERGPPGLAGAPGLRGGAGPPGPEG 705
>gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens]
Length = 234
Score = 35.0 bits (79), Expect = 0.098
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 241 RLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGA 300
RLC G ++G GPG L + + E + GAG P P PP PG A
Sbjct: 70 RLC-GEQVGRGPGFHAGTSALWRHLRSAHRRELESSGAGSSPP-----AAPCPPPPGPAA 123
Query: 301 AASG 304
A G
Sbjct: 124 APEG 127
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 35.0 bits (79), Expect = 0.098
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 240 ARLCFGAELGNGPG--SSGSDGGLDDYYDEDYDDEQRTG----GAGGEQPLDDDDGVPHP 293
++L GA LG PG S GS D+ +++ ++E G GG PL P P
Sbjct: 648 SQLARGARLGQPPGVRSGGSTDSEDEEEEDEEEEEDEEGIGCAARGGATPLSYPSPGPQP 707
Query: 294 PRPGSGAAASGGRGDLPYGP 313
P P A D P P
Sbjct: 708 PGPSWTATFDPVPTDAPTSP 727
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/85 (30%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPR-PGSGAAAS 303
G + GP G Y DYD+ G GGE+ + P P R SGA
Sbjct: 2394 GPHVSEGPPGPRHHGY---YRGSDYDEADGPGSGGGEEAMAGAYDAPPPVRHASSGATGR 2450
Query: 304 GGRGDLPYGPGRRSSGGGGRLAPRG 328
R GP S GR P G
Sbjct: 2451 SPRTPRASGPACASPSRHGRRLPNG 2475
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 34.3 bits (77), Expect = 0.17
Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 13/120 (10%)
Query: 44 RRLICWQALLQCQGEPECSYAYNQYAEACAPVLAQHGGGDAPGAAAAAFPASAASFSSRW 103
R L ++AL PE ++ AP A A AAAAA A+AAS ++
Sbjct: 317 RPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAASSAAAA 376
Query: 104 RCPSHCISALIQLNHTRRGPALEDC-DCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGG 162
P G A C C ++ + A L GGG GG G GG
Sbjct: 377 GAPPS------------GGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGGGGGGGGGGGG 424
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 34.3 bits (77), Expect = 0.17
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 272 EQRTGGAGGEQPLDDDDG--VPHPPRPGSGAAASG-GRGDLPYGP-GRRSSGGGGRLAPR 327
E+ G AG ++ DD G P PP+P ASG G G GP G SGG G P+
Sbjct: 561 EKHRGRAGADE---DDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPK 617
Query: 328 GA 329
A
Sbjct: 618 KA 619
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 34.3 bits (77), Expect = 0.17
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 272 EQRTGGAGGEQPLDDDDG--VPHPPRPGSGAAASG-GRGDLPYGP-GRRSSGGGGRLAPR 327
E+ G AG ++ DD G P PP+P ASG G G GP G SGG G P+
Sbjct: 561 EKHRGRAGADE---DDKGPRAPRPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPK 617
Query: 328 GA 329
A
Sbjct: 618 KA 619
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 34.3 bits (77), Expect = 0.17
Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 269 YDDEQRTGGAGGEQPLDDDDGVPHPPRPG---SGAAASGGRGDLPYGPGRRSSGGGGRLA 325
Y E G AGG P P PP PG S A A+ G L G G + GGGG L
Sbjct: 330 YAGEAGAGPAGGAAP-------PPPPPPGALGSFALAAAANGYLGAGAGGGAGGGGGPLV 382
Query: 326 PRGA 329
A
Sbjct: 383 AAAA 386
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 34.3 bits (77), Expect = 0.17
Identities = 32/104 (30%), Positives = 36/104 (34%), Gaps = 38/104 (36%)
Query: 262 DDYYDEDYDDEQRTGGAG-----------------GEQPL-------DDDD--------G 289
+D DE+ +D+ GG G GE L DDDD G
Sbjct: 26 EDEEDEEEEDDDEGGGGGPRLAVPAQRRRRRRSYAGEDELEDLEEEEDDDDILLAPPAGG 85
Query: 290 VPHPPRPGSGAAASGGRGDLPYGPGRRSSGGGGRLAPRGAWTPL 333
P PP P A A G G G GGG A GA PL
Sbjct: 86 SPAPPGPAPAAGAGAG------GGGGGGGAGGGGSAGSGAKNPL 123
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 34.3 bits (77), Expect = 0.17
Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPR-PGSGAAAS 303
G GN G G GG D Y + GG G + G P G +
Sbjct: 293 GPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFG 352
Query: 304 GGRGDLPYGPGRRSSGGGGRLAPR 327
G PYG G S GG G R
Sbjct: 353 GRSSGSPYGGGYGSGGGSGGYGSR 376
Score = 28.9 bits (63), Expect = 7.0
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 17/74 (22%)
Query: 249 GNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGD 308
G G GS GS GG D Y+ G GG DG + PG + G G
Sbjct: 251 GGGGGSRGSYGGGDGGYN----------GFGG-------DGGNYGGGPGYSSRGGYGGGG 293
Query: 309 LPYGPGRRSSGGGG 322
YG GGGG
Sbjct: 294 PGYGNQGGGYGGGG 307
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 34.3 bits (77), Expect = 0.17
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 276 GGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDLPYGPGRRSSGGGG-----RLAPRG 328
GG G +PL+ P P SG+ A+ G+ P P S GGG LAP G
Sbjct: 255 GGEDGGKPLNPPASTAFPQEPHSGSPAAAVNGNQPSFPPNSSGRGGGTPDANSLAPPG 312
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo
sapiens]
Length = 2603
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 73 APVLAQHGGGDAPGAAAAAFPASAASF------SSRWRCPS--HCISALIQLNHTRRGPA 124
A A G G P AA A P +AA SSR R S + + L ++ P
Sbjct: 9 AAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSRARSASSPRGMVRVCDLLLKKKPPQ 68
Query: 125 LEDCDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEA 169
+ ++ C+ + SGGG GG G GG G T +
Sbjct: 69 QQHHKAKRNRTCRPPSSSESSSDSDNSGGGGGGGGGGGGGGGTSS 113
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo
sapiens]
Length = 2352
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 8/105 (7%)
Query: 73 APVLAQHGGGDAPGAAAAAFPASAASF------SSRWRCPS--HCISALIQLNHTRRGPA 124
A A G G P AA A P +AA SSR R S + + L ++ P
Sbjct: 9 AAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSRARSASSPRGMVRVCDLLLKKKPPQ 68
Query: 125 LEDCDCAQDENCKSTKRAIEPCLPRTSGGGAGGPGAGGVMGCTEA 169
+ ++ C+ + SGGG GG G GG G T +
Sbjct: 69 QQHHKAKRNRTCRPPSSSESSSDSDNSGGGGGGGGGGGGGGGTSS 113
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 33.9 bits (76), Expect = 0.22
Identities = 29/95 (30%), Positives = 34/95 (35%), Gaps = 9/95 (9%)
Query: 234 SVKENMARLCFGAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHP 293
SV + + G G G G GS G Y GG GG + G +
Sbjct: 504 SVSTSHTTISGGGSRGGGGGGYGSGGSS---YGSGGGSYGSGGGGGGGRGSYGSGGSSYG 560
Query: 294 PRPGSGAAASGGRGDLPYGPG------RRSSGGGG 322
GS + GG G YG G R SGGGG
Sbjct: 561 SGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGG 595
Score = 29.6 bits (65), Expect = 4.1
Identities = 28/87 (32%), Positives = 32/87 (36%), Gaps = 26/87 (29%)
Query: 245 GAELGNGPGSSGSDGGLDDYYDEDYDDEQRTGGAGGEQPLDDDDGVPHPPRPGSGAAASG 304
G+ G+G GS GS GG GG G G R GSG G
Sbjct: 556 GSSYGSGGGSYGSGGG---------------GGGHGSYGSGSSSG---GYRGGSGGGGGG 597
Query: 305 GRGDLPYGPGRRSSGG--GGRLAPRGA 329
G GR S GG GG + RG+
Sbjct: 598 SSG------GRGSGGGSSGGSIGGRGS 618
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,879,360
Number of Sequences: 37866
Number of extensions: 1088406
Number of successful extensions: 8692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 7467
Number of HSP's gapped (non-prelim): 1307
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.