Guide to the Human Genome
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Name: ARIH1 Sequence: fasta or formatted (557aa) NCBI GI: 187761373
Description:

ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1

Referenced in:

Ring Finger Proteins
Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         25           2
 C cysteine            5.7         32           1
 D aspartate           7.2         40           3
 E glutamate          10.1         56           4
 F phenylalanine       2.9         16           1
 G glycine             7.9         44          14
 H histidine           3.2         18           2
 I isoleucine          3.8         21           2
 K lysine              6.5         36           2
 L leucine             7.2         40           2
 M methionine          2.9         16           1
 N asparagine          5.4         30           2
 P proline             3.1         17           1
 Q glutamine           5.2         29           2
 R arginine            4.7         26           3
 S serine              4.5         25           2
 T threonine           3.6         20           2
 V valine              5.2         29           2
 W tryptophan          2.2         12           1
 Y tyrosine            4.5         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ariadne ubiquitin-conjugating enzyme E2 binding pro... 
ARIH2                 0.258   ariadne homolog 2 
ANKIB1                0.145   ankyrin repeat and IBR domain containing 1 
CUL9                  0.105   p53-associated parkin-like cytoplasmic protein [Homo...
RNF19A                0.065   ring finger protein 19 
RNF19A                0.065   ring finger protein 19 
RNF19B                0.063   ring finger protein 19B isoform b 
RNF19B                0.062   ring finger protein 19B isoform a 
RNF144A               0.062   ring finger protein 144 
RNF14                 0.060   ring finger protein 14 isoform 1 
RNF14                 0.060   ring finger protein 14 isoform 1 
RNF14                 0.060   ring finger protein 14 isoform 1 
RNF14                 0.060   ring finger protein 14 isoform 2 
RNF14                 0.060   ring finger protein 14 isoform 1 
RNF144B               0.059   IBR domain containing 2 
PARK2                 0.050   parkin isoform 3 
PARK2                 0.050   parkin isoform 2 
PARK2                 0.050   parkin isoform 1 
RNF217                0.042   ring finger protein 217 
RNF216                0.031   ring finger protein 216 isoform b 
RNF216                0.031   ring finger protein 216 isoform a 
RNF31                 0.031   ring finger protein 31 
POU4F1                0.026   POU domain, class 4, transcription factor 1 
ONECUT2               0.025   one cut domain, family member 2 
MPND                  0.025   MPN domain containing isoform 2 
MPND                  0.025   MPN domain containing isoform 1 
BHLHE22               0.024   basic helix-loop-helix domain containing, class B, 5...
RBCK1                 0.023   RanBP-type and C3HC4-type zinc finger containing 1 is...
RBCK1                 0.023   RanBP-type and C3HC4-type zinc finger containing 1 ...
AR                    0.023   androgen receptor isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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