Guide to the Human Genome
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Name: MPND Sequence: fasta or formatted (471aa) NCBI GI: 31542699
Description:

MPN domain containing isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {451aa} MPN domain containing isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         41           3
 C cysteine            1.9          9           1
 D aspartate           4.5         21           1
 E glutamate           8.1         38           5
 F phenylalanine       2.5         12           1
 G glycine            11.0         52           7
 H histidine           2.5         12           1
 I isoleucine          1.9          9           1
 K lysine              4.9         23           2
 L leucine            11.0         52           2
 M methionine          1.7          8           1
 N asparagine          2.1         10           1
 P proline             7.6         36           3
 Q glutamine           3.8         18           1
 R arginine            4.9         23           2
 S serine              8.9         42           2
 T threonine           3.6         17           2
 V valine              5.7         27           2
 W tryptophan          1.7          8           1
 Y tyrosine            2.8         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MPN domain containing isoform 1 
MPND                  0.845   MPN domain containing isoform 2 
MYSM1                 0.080   Myb-like, SWIRM and MPN domains 1 
ARID1B                0.033   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.033   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.033   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
ARIH1                 0.032   ariadne ubiquitin-conjugating enzyme E2 binding pro...
POU4F1                0.028   POU domain, class 4, transcription factor 1 
SHOX2                 0.027   short stature homeobox 2 isoform a 
BHLHE22               0.027   basic helix-loop-helix domain containing, class B, 5...
MAF                   0.027   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.027   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
FAM98B                0.027   family with sequence similarity 98, member B isofor...
RFX1                  0.026   regulatory factor X1 
DACH1                 0.026   dachshund homolog 1 isoform b 
DACH1                 0.026   dachshund homolog 1 isoform a 
DACH1                 0.026   dachshund homolog 1 isoform c 
WIPF1                 0.026   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.026   WAS/WASL interacting protein family, member 1 
HOXB3                 0.024   homeobox B3 
SIX3                  0.024   sine oculis homeobox homolog 3 
PURA                  0.023   purine-rich element binding protein A 
RALY                  0.023   RNA binding protein (autoantigenic, hnRNP-associated ...
RALY                  0.023   RNA binding protein (autoantigenic, hnRNP-associated...
C2orf21               0.023   chromosome 2 open reading frame 21 isoform 1 
SLC4A5                0.023   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.023   sodium bicarbonate transporter 4 isoform c 
BRCC3                 0.022   BRCA1/BRCA2-containing complex, subunit 3 isoform 2 ...
BRCC3                 0.022   BRCA1/BRCA2-containing complex, subunit 3 isoform 1 ...
EVX2                  0.022   even-skipped homeobox 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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