Guide to the Human Genome
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Name: MPND Sequence: fasta or formatted (451aa) NCBI GI: 229577180
Description:

MPN domain containing isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {471aa} MPN domain containing isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         37           2
 C cysteine            1.8          8           1
 D aspartate           4.9         22           1
 E glutamate           7.8         35           5
 F phenylalanine       2.4         11           1
 G glycine            10.9         49           7
 H histidine           2.4         11           1
 I isoleucine          2.2         10           1
 K lysine              5.1         23           2
 L leucine            10.9         49           2
 M methionine          2.2         10           2
 N asparagine          2.2         10           1
 P proline             8.2         37           3
 Q glutamine           4.2         19           1
 R arginine            4.2         19           2
 S serine              8.9         40           2
 T threonine           3.3         15           2
 V valine              5.5         25           1
 W tryptophan          1.6          7           1
 Y tyrosine            3.1         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MPN domain containing isoform 2 
MPND                  0.888   MPN domain containing isoform 1 
MYSM1                 0.041   Myb-like, SWIRM and MPN domains 1 
ARID1B                0.034   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.034   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.034   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
ARIH1                 0.033   ariadne ubiquitin-conjugating enzyme E2 binding pro...
POU4F1                0.029   POU domain, class 4, transcription factor 1 
SHOX2                 0.028   short stature homeobox 2 isoform a 
BHLHE22               0.028   basic helix-loop-helix domain containing, class B, 5...
MAF                   0.028   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.028   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
FAM98B                0.028   family with sequence similarity 98, member B isofor...
RFX1                  0.027   regulatory factor X1 
DACH1                 0.027   dachshund homolog 1 isoform b 
DACH1                 0.027   dachshund homolog 1 isoform a 
DACH1                 0.027   dachshund homolog 1 isoform c 
WIPF1                 0.027   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.027   WAS/WASL interacting protein family, member 1 
HOXB3                 0.025   homeobox B3 
SIX3                  0.025   sine oculis homeobox homolog 3 
PURA                  0.024   purine-rich element binding protein A 
RALY                  0.024   RNA binding protein (autoantigenic, hnRNP-associated ...
RALY                  0.024   RNA binding protein (autoantigenic, hnRNP-associated...
C2orf21               0.024   chromosome 2 open reading frame 21 isoform 1 
SLC4A5                0.024   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.024   sodium bicarbonate transporter 4 isoform c 
EVX2                  0.023   even-skipped homeobox 2 
CAPNS1                0.023   calpain, small subunit 1 
CAPNS1                0.023   calpain, small subunit 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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