| Name: CD5 | Sequence: fasta or formatted (495aa) | NCBI GI: 166197668 | |
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Description: CD5 molecule
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.9 29 2 C cysteine 4.8 24 1 D aspartate 3.4 17 1 E glutamate 4.4 22 2 F phenylalanine 2.4 12 1 G glycine 7.3 36 2 H histidine 3.2 16 1 I isoleucine 2.0 10 2 K lysine 4.2 21 2 L leucine 10.7 53 2 M methionine 1.6 8 1 N asparagine 3.6 18 2 P proline 7.1 35 3 Q glutamine 7.7 38 2 R arginine 5.5 27 1 S serine 10.9 54 3 T threonine 5.1 25 3 V valine 5.7 28 2 W tryptophan 1.8 9 1 Y tyrosine 2.6 13 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 CD5 molecule DMBT1 0.060 deleted in malignant brain tumors 1 isoform c precu... SRCRB4D 0.060 scavenger receptor cysteine rich domain containing, ... DMBT1 0.059 deleted in malignant brain tumors 1 isoform b precu... LOC100291777 0.059 PREDICTED: similar to DMBT1 isoform 2 LOC100291777 0.055 PREDICTED: similar to DMBT1 isoform 1 CD163L1 0.055 scavenger receptor cysteine-rich type 1 precursor [H... DMBT1 0.054 deleted in malignant brain tumors 1 isoform a precu... CD163 0.045 CD163 antigen isoform b CD163 0.045 CD163 antigen isoform a LOC284297 0.037 hypothetical protein LOC284297 CD6 0.037 CD6 molecule LOC651581 0.035 PREDICTED: hypothetical protein CD5L 0.030 CD5 molecule-like PRSS12 0.024 neurotrypsin precursor LOXL3 0.019 lysyl oxidase-like 3 precursor ADAM8 0.013 ADAM metallopeptidase domain 8 precursor MSR1 0.012 macrophage scavenger receptor 1 isoform type 1 [Homo... LOXL4 0.010 lysyl oxidase-like 4 precursor MMP9 0.009 matrix metalloproteinase 9 preproprotein LOXL2 0.009 lysyl oxidase-like 2 precursor FLJ10404 0.009 hypothetical protein LOC54540 ESPN 0.008 espin PIGQ 0.008 phosphatidylinositol glycan anchor biosynthesis, cla... PIGQ 0.008 phosphatidylinositol glycan anchor biosynthesis, cla... SCARA5 0.008 scavenger receptor class A, member 5 LGALS3BP 0.008 galectin 3 binding protein ZFHX4 0.008 zinc finger homeodomain 4 NFX1 0.008 nuclear transcription factor, X-box binding 1 isofor... NFX1 0.008 nuclear transcription factor, X-box binding 1 isofor...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
