Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PIGQ Sequence: fasta or formatted (760aa) NCBI GI: 22538453
Description:

phosphatidylinositol glycan anchor biosynthesis, class Q isoform 1

Referenced in:

GPI Anchoring

Other entries for this name:
alt prot [581aa] phosphatidylinositol glycan anchor biosynthesis, class Q isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         64           2
 C cysteine            3.2         24           2
 D aspartate           2.5         19           1
 E glutamate           4.5         34           2
 F phenylalanine       3.3         25           2
 G glycine             7.4         56           2
 H histidine           4.9         37           2
 I isoleucine          2.6         20           2
 K lysine              1.6         12           2
 L leucine            17.0        129           3
 M methionine          1.4         11           1
 N asparagine          0.8          6           1
 P proline             8.7         66           3
 Q glutamine           5.0         38           2
 R arginine            6.2         47           2
 S serine              7.0         53           2
 T threonine           3.8         29           2
 V valine              7.0         53           2
 W tryptophan          3.0         23           1
 Y tyrosine            1.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol glycan anchor biosynthesis, cla... 
PIGQ                  0.641   phosphatidylinositol glycan anchor biosynthesis, cla...
SSBP4                 0.012   single stranded DNA binding protein 4 isoform a [Hom...
PCNXL3                0.012   pecanex-like 3 
MAPK1IP1L             0.011   MAPK-interacting and spindle-stabilizing protein [Ho...
SSBP4                 0.009   single stranded DNA binding protein 4 isoform b [Hom...
GAS2L1                0.009   growth arrest-specific 2 like 1 isoform a 
GAS2L1                0.009   growth arrest-specific 2 like 1 isoform a 
SAMD1                 0.008   sterile alpha motif domain containing 1 
DIAPH1                0.008   diaphanous 1 isoform 2 
DIAPH1                0.008   diaphanous 1 isoform 1 
MLL5                  0.008   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.008   myeloid/lymphoid or mixed-lineage leukemia 5 
LOC729370             0.007   PREDICTED: hypothetical protein 
STAB1                 0.007   stabilin 1 precursor 
GGN                   0.007   gametogenetin 
SYN1                  0.006   synapsin I isoform Ia 
SYN1                  0.006   synapsin I isoform Ib 
MDFI                  0.006   MyoD family inhibitor 
NACA                  0.006   nascent polypeptide-associated complex alpha subuni...
ZDHHC11B              0.006   PREDICTED: zinc finger, DHHC-type containing 11B [H...
TAF4                  0.006   TBP-associated factor 4 
SF3A2                 0.006   splicing factor 3a, subunit 2 
PNPLA1                0.006   patatin-like phospholipase domain containing 1 isof...
PNPLA1                0.006   patatin-like phospholipase domain containing 1 isof...
PNPLA1                0.006   patatin-like phospholipase domain containing 1 isof...
BICC1                 0.006   bicaudal C homolog 1 
IRAK1                 0.006   interleukin-1 receptor-associated kinase 1 isoform 3...
IRAK1                 0.006   interleukin-1 receptor-associated kinase 1 isoform 2...
IRAK1                 0.006   interleukin-1 receptor-associated kinase 1 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press