Guide to the Human Genome
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Name: ADAM8 Sequence: fasta or formatted (856aa) NCBI GI: 69354859
Description:

ADAM metallopeptidase domain 8 precursor

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         81           2
 C cysteine            5.3         45           2
 D aspartate           3.5         30           2
 E glutamate           5.6         48           2
 F phenylalanine       2.9         25           2
 G glycine             9.5         81           2
 H histidine           4.2         36           1
 I isoleucine          1.6         14           2
 K lysine              3.0         26           2
 L leucine             8.1         69           2
 M methionine          1.6         14           2
 N asparagine          2.9         25           1
 P proline             9.1         78           3
 Q glutamine           4.9         42           2
 R arginine            6.3         54           2
 S serine              6.0         51           2
 T threonine           4.3         37           2
 V valine              8.4         72           4
 W tryptophan          1.1          9           1
 Y tyrosine            2.2         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADAM metallopeptidase domain 8 precursor 
ADAM12                0.278   ADAM metallopeptidase domain 12 isoform 1 preproprot...
ADAM19                0.273   ADAM metallopeptidase domain 19 preproprotein 
ADAM12                0.269   ADAM metallopeptidase domain 12 isoform 2 preproprot...
ADAM28                0.263   ADAM metallopeptidase domain 28 isoform 1 preproprot...
ADAM33                0.245   ADAM metallopeptidase domain 33 isoform alpha prepro...
ADAM33                0.228   ADAM metallopeptidase domain 33 isoform beta preprop...
ADAM28                0.212   ADAM metallopeptidase domain 28 isoform 3 preproprot...
ADAM15                0.210   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.210   a disintegrin and metalloproteinase domain 15 isofor...
ADAM9                 0.210   ADAM metallopeptidase domain 9 isoform 1 precursor [H...
ADAM15                0.210   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.209   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.209   a disintegrin and metalloproteinase domain 15 isofor...
ADAM15                0.205   a disintegrin and metalloproteinase domain 15 isofor...
ADAM7                 0.190   a disintegrin and metalloproteinase domain 7 
ADAM20                0.153   ADAM metallopeptidase domain 20 preproprotein 
ADAM11                0.150   ADAM metallopeptidase domain 11 preproprotein 
ADAM29                0.149   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.149   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.149   ADAM metallopeptidase domain 29 preproprotein [Homo...
ADAM29                0.149   ADAM metallopeptidase domain 29 preproprotein 
ADAM22                0.148   ADAM metallopeptidase domain 22 isoform 2 preproprot...
ADAM22                0.148   ADAM metallopeptidase domain 22 isoform 5 preproprot...
ADAM22                0.148   ADAM metallopeptidase domain 22 isoform 3 preproprot...
ADAM22                0.146   ADAM metallopeptidase domain 22 isoform 1 preproprot...
ADAM22                0.146   ADAM metallopeptidase domain 22 isoform 4 preproprote...
ADAM30                0.142   ADAM metallopeptidase domain 30 preproprotein 
ADAM23                0.137   ADAM metallopeptidase domain 23 preproprotein 
ADAM32                0.134   a disintegrin and metalloprotease domain 32 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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