Search of human proteins with 164663768

Search of human proteins with 164663768

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|164663768 hypothetical protein LOC339263 [Homo sapiens]
         (221 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|164663768 hypothetical protein LOC339263 [Homo sapiens]            466   e-132
gi|239756762 PREDICTED: hypothetical protein XP_002345047 [Homo ...    48   8e-06
gi|239745747 PREDICTED: hypothetical protein XP_002343544 [Homo ...    48   8e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         41   0.001
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    33   0.25 
gi|45439357 elongin A2 [Homo sapiens]                                  33   0.25 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    32   0.43 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    32   0.43 
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ...    32   0.56 
gi|239754950 PREDICTED: hypothetical protein XP_002346164 [Homo ...    32   0.56 
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ...    32   0.56 
gi|239749490 PREDICTED: hypothetical protein XP_002347051 [Homo ...    32   0.56 
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ...    32   0.56 
gi|188536004 zinc finger protein 469 [Homo sapiens]                    32   0.56 
gi|37693995 Kruppel-like factor 13 [Homo sapiens]                      32   0.56 
gi|46409372 G protein-coupled receptor 153 [Homo sapiens]              32   0.56 
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ...    31   0.73 
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    31   0.73 
gi|48255924 NADH-ubiquinone oxidoreductase flavoprotein 3 isofor...    31   0.73 
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]            31   0.96 
gi|148612882 cat eye syndrome chromosome region, candidate 2 [Ho...    31   0.96 
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    31   0.96 
gi|66730423 hypothetical protein LOC389384 [Homo sapiens]              31   0.96 
gi|239757699 PREDICTED: hypothetical protein [Homo sapiens]            30   1.2  
gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo ...    30   1.2  
gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo ...    30   1.2  
gi|157785645 SPEG complex locus [Homo sapiens]                         30   1.2  
gi|71143127 IQ motif and Sec7 domain 3 [Homo sapiens]                  30   1.2  
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s...    30   1.2  
gi|45120119 microtubule associated serine/threonine kinase 1 [Ho...    30   1.6  

>gi|164663768 hypothetical protein LOC339263 [Homo sapiens]
          Length = 221

 Score =  466 bits (1199), Expect = e-132
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MGEKSRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPE 60
           MGEKSRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPE
Sbjct: 1   MGEKSRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPE 60

Query: 61  PRRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISV 120
           PRRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISV
Sbjct: 61  PRRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISV 120

Query: 121 PQLSGAPILLPDLEGTKLSNFQESSPLPHKHERKDKRSTPEEEGRSAPEKIIQSLKLCPG 180
           PQLSGAPILLPDLEGTKLSNFQESSPLPHKHERKDKRSTPEEEGRSAPEKIIQSLKLCPG
Sbjct: 121 PQLSGAPILLPDLEGTKLSNFQESSPLPHKHERKDKRSTPEEEGRSAPEKIIQSLKLCPG 180

Query: 181 GHRPASLSSGCPAGCRLSFNLPPSMLLSVQKCCMPSSLKTC 221
           GHRPASLSSGCPAGCRLSFNLPPSMLLSVQKCCMPSSLKTC
Sbjct: 181 GHRPASLSSGCPAGCRLSFNLPPSMLLSVQKCCMPSSLKTC 221


>gi|239756762 PREDICTED: hypothetical protein XP_002345047 [Homo
          sapiens]
          Length = 99

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 17 GKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHS-PEPRRARAPPTRRAQAA 75
          G    TC+ PYAPW FTP +    +  R    +W     +++ P P      P    +  
Sbjct: 4  GSSACTCEDPYAPWGFTPFA-GSNSLGRGLLVLWGPLGHKNTGPSPGELAGLPPAVLRLH 62

Query: 76 LYAPALRLRDHLDRFSILMTS 96
             PAL LRDHL  FSIL+ S
Sbjct: 63 FCTPALHLRDHLGHFSILIKS 83


>gi|239745747 PREDICTED: hypothetical protein XP_002343544 [Homo
          sapiens]
          Length = 99

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 17 GKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHS-PEPRRARAPPTRRAQAA 75
          G    TC+ PYAPW FTP +    +  R    +W     +++ P P      P    +  
Sbjct: 4  GSSACTCEDPYAPWGFTPFA-GSNSLGRGLLVLWGPLGHKNTGPSPGELAGLPPAVLRLH 62

Query: 76 LYAPALRLRDHLDRFSILMTS 96
             PAL LRDHL  FSIL+ S
Sbjct: 63 FCTPALHLRDHLGHFSILIKS 83


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 55/206 (26%), Positives = 74/206 (35%), Gaps = 22/206 (10%)

Query: 6   RRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRAR 65
           RR+ P+PR     + R       P   T S   P      P P    R   HSP P++  
Sbjct: 587 RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP-PKRRVSHSPPPKQRS 645

Query: 66  APPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISVPQLSG 125
           +P T+R   +L +          R     +  T   ++PQ     R   S R   PQ S 
Sbjct: 646 SPVTKRRSPSLSSK--------HRKGSSPSRSTREARSPQPNK--RHSPSPRPRAPQTSS 695

Query: 126 APILLPDLEGTKLSNFQESSPLPHKHERKDKRSTPEEEGRSAPEKIIQSLKLCPGGHRPA 185
           +P   P   G   S  +  SP P     +    TPE      P+KI ++    P   R  
Sbjct: 696 SP--PPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE------PKKIKKAASPSPQSVRRV 747

Query: 186 SLS---SGCPAGCRLSFNLPPSMLLS 208
           S S   SG P         PPS + S
Sbjct: 748 SSSRSVSGSPEPAAKKPPAPPSPVQS 773


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 13/66 (19%)

Query: 8   KGPAPRHADGKLGRTCDHPYAPWSFTPSSR-----APTAWVRPPCPVWASRLQEHSPEPR 62
           KGPAP        + C  P   WS  P+S+     APT    PP P   S      PE R
Sbjct: 482 KGPAPAP------QQCSEPETKWSSIPASKPRRGTAPTRTAAPPWPGGVS--VRTGPEKR 533

Query: 63  RARAPP 68
            +  PP
Sbjct: 534 SSTRPP 539


>gi|45439357 elongin A2 [Homo sapiens]
          Length = 753

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 41/171 (23%), Positives = 59/171 (34%), Gaps = 31/171 (18%)

Query: 3   EKSRRKGPAPRHADG---KLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSP 59
           +++ R GP          + G         W F  ++ AP             R   HSP
Sbjct: 80  DRNTRPGPQDPEESASRQRFGEALQDQEKAWGFPENATAP-------------RSPSHSP 126

Query: 60  EPRRA--RAPP----------TRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAP 107
           E RR   R PP          +R  +A    P +   D   R+    T  T+ L+ P+ P
Sbjct: 127 EHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADS-GRYRASPTR-TAPLRMPEGP 184

Query: 108 G-LCRDEQSSRISVPQLSGAPILLPDLEGTKLSNFQESSPLPHKHERKDKR 157
                 +Q  R       G P+L P  +G        S    HK  R++KR
Sbjct: 185 EPAAPGKQPGRGHTHAAQGGPLLCPGCQGQPQGKAVVSHSKGHKSSRQEKR 235


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 9/166 (5%)

Query: 26  PYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRARAPPTRRAQAALYAPALRL-R 84
           P +P S TP S+AP +   PP  V  S     +  P    A P  +A   L AP L+L +
Sbjct: 459 PVSP-SATPPSQAPPSLAAPPLQVPPS---PPASPPMSPSATPPPQAPPPLAAPPLQLAK 514

Query: 85  DHLDRFSILMTSCTSWLQAPQA--PGLCRDEQSSRISVPQLSGAPILLPDLEGTKLSNFQ 142
                   L T     L +P A  PG      S+ + +  L+  P   P +    L    
Sbjct: 515 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 574

Query: 143 ESSPLPHKHERKDKRSTPEEEGRSAPEKIIQSLKLCPGGHRPASLS 188
            S P     +   +  TP  +   +  ++  +L L PG   P S S
Sbjct: 575 PSPPASPTLQAPRRPPTPGPDTSVSGPRL--TLALAPGPPPPPSRS 618


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 32.0 bits (71), Expect = 0.43
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 9/166 (5%)

Query: 26  PYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRARAPPTRRAQAALYAPALRL-R 84
           P +P S TP S+AP +   PP  V  S     +  P    A P  +A   L AP L+L +
Sbjct: 420 PVSP-SATPPSQAPPSLAAPPLQVPPS---PPASPPMSPSATPPPQAPPPLAAPPLQLAK 475

Query: 85  DHLDRFSILMTSCTSWLQAPQA--PGLCRDEQSSRISVPQLSGAPILLPDLEGTKLSNFQ 142
                   L T     L +P A  PG      S+ + +  L+  P   P +    L    
Sbjct: 476 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 535

Query: 143 ESSPLPHKHERKDKRSTPEEEGRSAPEKIIQSLKLCPGGHRPASLS 188
            S P     +   +  TP  +   +  ++  +L L PG   P S S
Sbjct: 536 PSPPASPTLQAPRRPPTPGPDTSVSGPRL--TLALAPGPPPPPSRS 579


>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 5   SRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRA 64
           +RR G  PR   G  G    HP AP      + AP A  +PP P   S+L +      + 
Sbjct: 102 ARRPGKPPRRPKGAAG----HPSAP-----PAAAPAAPAQPPAPRPESQLSDRPQSWEQK 152

Query: 65  RAPPTRRAQAA 75
              P R A++A
Sbjct: 153 PRGPGRSARSA 163


>gi|239754950 PREDICTED: hypothetical protein XP_002346164 [Homo
          sapiens]
          Length = 104

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 26 PYAPWSFTPSSRAPTAWVRP-PCPVWASRLQEHSPEPRRARA--PPTRRAQAALYAPALR 82
          P  P  F   S     + +P PCPV  +  + +S  P R R   PP R A+  L   +LR
Sbjct: 25 PLKPSPFLCCSSVAVLFDKPHPCPVSINHRRRNSCPPHRERTARPPPRHARTRLQGASLR 84

Query: 83 L 83
          L
Sbjct: 85 L 85


>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 5   SRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRA 64
           +RR G  PR   G  G    HP AP      + AP A  +PP P   S+L +      + 
Sbjct: 102 ARRPGKPPRRPKGAAG----HPSAP-----PAAAPAAPAQPPAPRPESQLSDRPQSWEQK 152

Query: 65  RAPPTRRAQAA 75
              P R A++A
Sbjct: 153 PRGPGRSARSA 163


>gi|239749490 PREDICTED: hypothetical protein XP_002347051 [Homo
          sapiens]
          Length = 104

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 26 PYAPWSFTPSSRAPTAWVRP-PCPVWASRLQEHSPEPRRARA--PPTRRAQAALYAPALR 82
          P  P  F   S     + +P PCPV  +  + +S  P R R   PP R A+  L   +LR
Sbjct: 25 PLKPSPFLCCSSVAVLFDKPHPCPVSINHRRRNSCPPHRERTARPPPRHARTRLQGASLR 84

Query: 83 L 83
          L
Sbjct: 85 L 85


>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 5   SRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRA 64
           +RR G  PR   G  G    HP AP      + AP A  +PP P   S+L +      + 
Sbjct: 102 ARRPGKPPRRPKGAAG----HPSAP-----PAAAPAAPAQPPAPRPESQLSDRPQSWEQR 152

Query: 65  RAPPTRRAQAA 75
              P R A++A
Sbjct: 153 PRGPGRSARSA 163


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 2    GEKSRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEP 61
            G   R  G  PR  DG   R    P  P +  P SRA  A    P    A+ L E +   
Sbjct: 970  GGGGRASGLRPRRNDGLGERPPPRPRRPRTQAPGSRADPA----PRVPRAAALPEETRSS 1025

Query: 62   RRARAPPTR 70
            RR R PP +
Sbjct: 1026 RRRRLPPRK 1034


>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
          Length = 288

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 23/84 (27%), Positives = 29/84 (34%), Gaps = 12/84 (14%)

Query: 7   RKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPT------AWVRPPCPVWASRLQEHSPE 60
           ++ PAP  A+ + G        P    P +  PT      A   PP P W+       PE
Sbjct: 73  QQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAAPPSPAWS------EPE 126

Query: 61  PRRARAPPTRRAQAALYAPALRLR 84
           P     P      A    P LR R
Sbjct: 127 PEAGLEPEREPGPAGSGEPGLRQR 150


>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
          Length = 609

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 2   GEKSRRKGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEP 61
           G   RR GP PR A   L      P A ++ T     P A  RPP P  A+       +P
Sbjct: 481 GSPRRRPGPGPRSASASL-----LPDA-FALTAFECEPQALRRPPGPFPAAPAAPDGADP 534

Query: 62  RRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSW 100
             A  PP+    +A  +P  R   H    S+      SW
Sbjct: 535 GEAPTPPS----SAQRSPGPRPSAHSHAGSLRPGLSASW 569


>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
           sapiens]
          Length = 722

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 25/159 (15%)

Query: 25  HPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRARAPPTRRAQAALYAPALRLR 84
           HP+   +     + P   V PP P     LQ   P P + + PP    Q     P +   
Sbjct: 223 HPFPAVTPDLIVQTPVMTVVPPQP-----LQTPPPVPPQPQPPPAPAPQPVQSHPPI--- 274

Query: 85  DHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISVPQLSGAPILLPDLEGTKLSNFQES 144
                      + T      +     + + ++  ++  +   P L P+ + TKL   +ES
Sbjct: 275 ----------IAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRES 324

Query: 145 SPLPHKHERKDKRSTPEEEGRSAPEK---IIQSLKLCPG 180
           S  P K  +KD    P+ +   APEK   + + LK C G
Sbjct: 325 SR-PVKPPKKD---VPDSQQHPAPEKSSKVSEQLKCCSG 359


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 25/159 (15%)

Query: 25  HPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRARAPPTRRAQAALYAPALRLR 84
           HP+   +     + P   V PP P     LQ   P P + + PP    Q     P +   
Sbjct: 223 HPFPAVTPDLIVQTPVMTVVPPQP-----LQTPPPVPPQPQPPPAPAPQPVQSHPPI--- 274

Query: 85  DHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISVPQLSGAPILLPDLEGTKLSNFQES 144
                      + T      +     + + ++  ++  +   P L P+ + TKL   +ES
Sbjct: 275 ----------IAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRES 324

Query: 145 SPLPHKHERKDKRSTPEEEGRSAPEK---IIQSLKLCPG 180
           S  P K  +KD    P+ +   APEK   + + LK C G
Sbjct: 325 SR-PVKPPKKD---VPDSQQHPAPEKSSKVSEQLKCCSG 359


>gi|48255924 NADH-ubiquinone oxidoreductase flavoprotein 3 isoform a
           precursor [Homo sapiens]
          Length = 473

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 20/68 (29%), Positives = 26/68 (38%)

Query: 8   KGPAPRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEHSPEPRRARAP 67
           KGP P H    L        AP      +RA       P       L++  PEP+R  AP
Sbjct: 288 KGPLPVHTKSGLSAPPKGSPAPAVLAEEARAEGQLQASPPGAAEGHLEKPVPEPQRKAAP 347

Query: 68  PTRRAQAA 75
           P  R + +
Sbjct: 348 PLPRKETS 355


>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 707

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 29 PWSFTPSSRAPTAWVRPPC------PVWASRLQEHSPEPRRARAPPTRRAQ 73
          P SF+P + AP A   PPC       +  SR     P+P R R+P  RR +
Sbjct: 49 PLSFSPEAIAPPAPRPPPCRGPLDRDLAPSRSGGSWPQPCRLRSPAARRGE 99


>gi|148612882 cat eye syndrome chromosome region, candidate 2 [Homo
           sapiens]
          Length = 1484

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 23/88 (26%)

Query: 9   GPAPRHADGKLGRTCDH-------PYAPWS----FTPSSRAPTAWVRPPCPVWASRLQEH 57
           GP P H    LG   D        P   W+    F P     + ++RPPC     RLQ  
Sbjct: 815 GPGPSHQPRTLGHVMDSRVMRPPVPPNQWTEQSGFLPHGVPSSGYMRPPCKSAGHRLQ-- 872

Query: 58  SPEPRRARAPPTRRAQAALY-APALRLR 84
                    PP   A ++L+ APA  LR
Sbjct: 873 ---------PPPVPAPSSLFGAPAQALR 891


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 19/80 (23%)

Query: 2   GEKSRRKGPAPRHADGKLGRTCDHPYAPWSFTPS-SRAPTAWVRPPCPVWASRLQEHSPE 60
           G++ RR G   RH      R+       WS +PS SR+ T            R + HSP 
Sbjct: 476 GDRYRRGGRGLRHHSSSRSRSS------WSLSPSRSRSLT------------RSRSHSPS 517

Query: 61  PRRARAPPTRRAQAALYAPA 80
           P ++R+    R+Q+   +PA
Sbjct: 518 PSQSRSRSRSRSQSPSPSPA 537


>gi|66730423 hypothetical protein LOC389384 [Homo sapiens]
          Length = 652

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 112 DEQS--SRISVPQLSGAPILLPDLEGTKLSNFQESSPLPHKHERKD-KRSTPEEEGRSA- 167
           +EQS  S++ V   + AP +    +  K S  + S   P KH  ++ KR   +     A 
Sbjct: 263 EEQSLASQLGVALPNPAPAVRKKSQEKKTSLKRTSKTNPKKHGSEEAKRGAADVSSPEAW 322

Query: 168 PEKIIQSLKLCPGGHRPASLSS 189
           P K    L LC  GHRP+  SS
Sbjct: 323 PPKKSSFLPLCVSGHRPSISSS 344



 Score = 28.1 bits (61), Expect = 6.2
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 150 KHERKDKRSTPEEEGRSAPE----KIIQSLKLCPGGHRPASLSSGCPAGCRLSFNLP 202
           KH  K+ R      G ++PE    K    L LC GGHRP++ SS  P        LP
Sbjct: 447 KHTSKEPRRAGAA-GAASPEARRPKRPSFLPLCVGGHRPSTSSSLDPEDLECREPLP 502


>gi|239757699 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 270

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)

Query: 61  PRRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISV 120
           PRR+R    R +   L +P LRLR  LD                  PGL   +  +R S 
Sbjct: 185 PRRSRDEGRRASPGNLASPGLRLRCRLD-----------------LPGLGLRDLGARSSS 227

Query: 121 PQLSGAPILLPDLEGTKLSNFQESSPL 147
              S    L+P+L    L+N +E S +
Sbjct: 228 VLSSSPSELVPELSVLLLANSEEGSEI 254


>gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo
           sapiens]
          Length = 270

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)

Query: 61  PRRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISV 120
           PRR+R    R +   L +P LRLR  LD                  PGL   +  +R S 
Sbjct: 185 PRRSRDEGRRASPGNLASPGLRLRCRLD-----------------LPGLGLRDLGARSSS 227

Query: 121 PQLSGAPILLPDLEGTKLSNFQESSPL 147
              S    L+P+L    L+N +E S +
Sbjct: 228 VLSSSPSELVPELSVLLLANSEEGSEI 254


>gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo
           sapiens]
          Length = 270

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)

Query: 61  PRRARAPPTRRAQAALYAPALRLRDHLDRFSILMTSCTSWLQAPQAPGLCRDEQSSRISV 120
           PRR+R    R +   L +P LRLR  LD                  PGL   +  +R S 
Sbjct: 185 PRRSRDEGRRASPGNLASPGLRLRCRLD-----------------LPGLGLRDLGARSSS 227

Query: 121 PQLSGAPILLPDLEGTKLSNFQESSPL 147
              S    L+P+L    L+N +E S +
Sbjct: 228 VLSSSPSELVPELSVLLLANSEEGSEI 254


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 46/161 (28%), Positives = 58/161 (36%), Gaps = 34/161 (21%)

Query: 26   PYAPWSFTPSSRAPTAWVRPPCPVWA-SRLQEHSPEPRRAR--APPTRRAQAALYAPALR 82
            P  P S  PS+  P+   +PP P  A  +  E  PEP RA   APP +    AL   AL 
Sbjct: 2186 PSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQ----ALQTLALP 2241

Query: 83   LRDHLDRFSILMTSCTSWLQAP-QAPGLCRDEQSSRIS----------------VPQLSG 125
            L  +      L  S     Q P Q P     E     +                VP   G
Sbjct: 2242 LTPYAQIIQSLQLS--GHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGAPEKRVPSAGG 2299

Query: 126  APIL--------LPDLEGTKLSNFQESSPLPHKHERKDKRS 158
             P+L        +P   G+ LS+  E+       E K KRS
Sbjct: 2300 PPVLAEKARVPTVPPRPGSSLSSSIENLESEAVFEAKFKRS 2340


>gi|71143127 IQ motif and Sec7 domain 3 [Homo sapiens]
          Length = 759

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 16/125 (12%)

Query: 98  TSWLQAPQAPGLCRDEQSSRISVPQLSGAPILLPDLEGTKLSNFQESSPLPHKHERKDKR 157
           TS  +AP+AP + R++ S+  S  + +              S   + +  P   E +++ 
Sbjct: 229 TSGREAPEAPAVGREDASAEDSCAEAAA-------------SGAADGATAPKTEEEEEEE 275

Query: 158 STPEEEGRSAPEKIIQSLKLCPGGHRPASLSSGCPAGCRLSFNLPPSMLLSVQK--CCMP 215
            T  E GR A  +     +L        S  SG  A    S +   +M+LS+ +  C  P
Sbjct: 276 ET-AEVGRGAEAEAGDLEQLSSSSTSTKSAKSGSEASASASKDALQAMILSLPRYHCENP 334

Query: 216 SSLKT 220
           +S K+
Sbjct: 335 ASCKS 339


>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
           sapiens]
          Length = 691

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 103 APQAPGLCRDEQSSRISVPQLSGAPILLPDLEGTKLSNF-QESSPLPHKHERKDKRSTPE 161
           APQAP   + +Q  + + PQ        P    ++L    Q     PH H +   + +P 
Sbjct: 208 APQAPSQSQ-QQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPSPT 266

Query: 162 EEGRSAPEKIIQSLKLCPGGHRPASLSSGCP 192
           ++  S P+K  QS    PG   P+ L+   P
Sbjct: 267 QQSSSPPQKPSQS----PGHGLPSPLTPPNP 293


>gi|45120119 microtubule associated serine/threonine kinase 1 [Homo
            sapiens]
          Length = 1570

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 26/94 (27%), Positives = 33/94 (35%), Gaps = 7/94 (7%)

Query: 121  PQLSGAPILLPDLEGTKLSNFQESSPL-------PHKHERKDKRSTPEEEGRSAPEKIIQ 173
            P   GA  ++P   G      QE +PL       P   ER       E    S P     
Sbjct: 1440 PARPGAKAVVPQPLGADSKGLQEPAPLAPSVPEAPRGRERWVLEVVEERTTLSGPRSKPA 1499

Query: 174  SLKLCPGGHRPASLSSGCPAGCRLSFNLPPSMLL 207
            S KL P    P+   + C A       +PP+ LL
Sbjct: 1500 SPKLSPEPQTPSLAPAKCSAPSSAVTPVPPASLL 1533


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,409,872
Number of Sequences: 37866
Number of extensions: 635002
Number of successful extensions: 2444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 2390
Number of HSP's gapped (non-prelim): 113
length of query: 221
length of database: 18,247,518
effective HSP length: 98
effective length of query: 123
effective length of database: 14,536,650
effective search space: 1788007950
effective search space used: 1788007950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.