| Name: LOC100287291 | Sequence: fasta or formatted (270aa) | NCBI GI: 239746707 | |
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Description: PREDICTED: hypothetical protein XP_002343834
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.0 19 2 C cysteine 1.5 4 1 D aspartate 4.4 12 2 E glutamate 5.2 14 2 F phenylalanine 0.4 1 1 G glycine 14.1 38 2 H histidine 0.7 2 1 I isoleucine 2.6 7 2 K lysine 1.5 4 1 L leucine 14.1 38 4 M methionine 0.4 1 1 N asparagine 1.5 4 1 P proline 12.6 34 4 Q glutamine 3.7 10 1 R arginine 10.7 29 3 S serine 11.1 30 3 T threonine 2.2 6 1 V valine 3.0 8 1 W tryptophan 3.3 9 2 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343834 LOC100293059 1.000 PREDICTED: hypothetical protein LOC100290935 1.000 PREDICTED: hypothetical protein XP_002348161 PRB1 0.037 proline-rich protein BstNI subfamily 1 isoform 3 pre... PRB1 0.037 proline-rich protein BstNI subfamily 1 isoform 2 pre... PRB2 0.035 proline-rich protein BstNI subfamily 2 PRB1 0.035 proline-rich protein BstNI subfamily 1 isoform 1 pre... LOC100293055 0.034 PREDICTED: similar to COL22A1 protein COL1A1 0.030 alpha 1 type I collagen preproprotein LOC100130897 0.030 PREDICTED: hypothetical protein LOC100130897 0.030 PREDICTED: hypothetical protein COL22A1 0.028 collagen, type XXII, alpha 1 EWSR1 0.028 Ewing sarcoma breakpoint region 1 isoform 4 EWSR1 0.028 Ewing sarcoma breakpoint region 1 isoform 3 EWSR1 0.028 Ewing sarcoma breakpoint region 1 isoform 1 EWSR1 0.028 Ewing sarcoma breakpoint region 1 isoform 2 COL3A1 0.026 collagen type III alpha 1 preproprotein COL5A1 0.026 alpha 1 type V collagen preproprotein COL7A1 0.026 alpha 1 type VII collagen precursor C9orf86 0.024 Rab-like GTP-binding protein 1 isoform 1 COL11A1 0.024 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.024 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.024 alpha 1 type XI collagen isoform A preproprotein [Ho... PRR12 0.024 proline rich 12 RAB11FIP3 0.022 rab11-family interacting protein 3 isoform 1 RANBP9 0.022 RAN binding protein 9 LOC100127891 0.022 PREDICTED: hypothetical protein BSN 0.022 bassoon protein ZCCHC2 0.022 zinc finger, CCHC domain containing 2 C1QTNF2 0.022 C1q and tumor necrosis factor related protein 2 [Hom...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
