Guide to the Human Genome
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Name: NDUFV3 Sequence: fasta or formatted (473aa) NCBI GI: 48255924
Description:

NADH-ubiquinone oxidoreductase flavoprotein 3 isoform a precursor

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt prot [108aa] NADH-ubiquinone oxidoreductase flavoprotein 3 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         40           3
 C cysteine            0.2          1           1
 D aspartate           3.6         17           2
 E glutamate           9.3         44           2
 F phenylalanine       2.7         13           1
 G glycine             7.0         33           2
 H histidine           2.3         11           2
 I isoleucine          1.1          5           1
 K lysine              9.3         44           3
 L leucine             7.6         36           2
 M methionine          1.1          5           1
 N asparagine          2.7         13           2
 P proline            10.8         51           2
 Q glutamine           5.5         26           1
 R arginine            5.3         25           1
 S serine             11.2         53           9
 T threonine           5.1         24           2
 V valine              5.9         28           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NADH-ubiquinone oxidoreductase flavoprotein 3 isofor... 
NDUFV3                0.097   NADH-ubiquinone oxidoreductase flavoprotein 3 isofor...
NEFH                  0.039   neurofilament, heavy polypeptide 200kDa 
NOLC1                 0.027   nucleolar and coiled-body phosphoprotein 1 
SRRM1                 0.027   serine/arginine repetitive matrix 1 
BRD4                  0.026   bromodomain-containing protein 4 isoform long 
AFF3                  0.026   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.026   AF4/FMR2 family, member 3 isoform 1 
ZC3H18                0.026   zinc finger CCCH-type containing 18 
SRRM2                 0.024   splicing coactivator subunit SRm300 
PCLO                  0.024   piccolo isoform 2 
PCLO                  0.024   piccolo isoform 1 
TTN                   0.024   titin isoform N2-A 
TCOF1                 0.024   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.024   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TNRC18                0.024   trinucleotide repeat containing 18 
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.023   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MYO18B                0.023   myosin XVIIIB 
CYTSA                 0.022   cytospin A 
CYTSA                 0.022   cytospin A 
FAM133A               0.022   hypothetical protein LOC286499 
RERE                  0.022   atrophin-1 like protein isoform b 
RERE                  0.022   atrophin-1 like protein isoform a 
RERE                  0.022   atrophin-1 like protein isoform a 
TRDN                  0.022   triadin 
TACC2                 0.021   transforming, acidic coiled-coil containing protein...
REST                  0.021   RE1-silencing transcription factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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