Guide to the Human Genome
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Name: KLF13 Sequence: fasta or formatted (288aa) NCBI GI: 37693995
Description:

Kruppel-like factor 13

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2         41           4
 C cysteine            2.8          8           1
 D aspartate           3.5         10           1
 E glutamate           8.0         23           2
 F phenylalanine       2.4          7           1
 G glycine             7.6         22           3
 H histidine           4.5         13           1
 I isoleucine          1.0          3           1
 K lysine              4.5         13           2
 L leucine             5.2         15           1
 M methionine          1.4          4           1
 N asparagine          1.0          3           1
 P proline            10.8         31           3
 Q glutamine           2.1          6           2
 R arginine           11.5         33           2
 S serine              9.7         28           2
 T threonine           3.8         11           1
 V valine              3.5         10           2
 W tryptophan          0.7          2           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 13 
KLF9                  0.323   Kruppel-like factor 9 
KLF16                 0.318   BTE-binding protein 4 
KLF14                 0.316   Kruppel-like factor 14 
SP8                   0.247   Sp8 transcription factor isoform 1 
SP8                   0.247   Sp8 transcription factor isoform 2 
SP9                   0.231   Sp9 transcription factor homolog 
KLF11                 0.226   Kruppel-like factor 11 
KLF10                 0.222   Kruppel-like factor 10 isoform b 
KLF10                 0.222   Kruppel-like factor 10 isoform a 
SP7                   0.217   osterix 
SP4                   0.217   Sp4 transcription factor 
SP1                   0.213   Sp1 transcription factor isoform a 
SP1                   0.213   Sp1 transcription factor isoform b 
KLF2                  0.210   Kruppel-like factor 
SP5                   0.208   Sp5 transcription factor 
SP3                   0.206   Sp3 transcription factor isoform 2 
SP3                   0.206   Sp3 transcription factor isoform 1 
KLF5                  0.205   Kruppel-like factor 5 
KLF6                  0.201   Kruppel-like factor 6 isoform A 
KLF3                  0.201   Kruppel-like factor 3 (basic) 
KLF1                  0.192   Kruppel-like factor 1 (erythroid) 
KLF15                 0.191   Kruppel-like factor 15 
KLF4                  0.189   Kruppel-like factor 4 (gut) 
KLF12                 0.189   Kruppel-like factor 12 
SP2                   0.187   Sp2 transcription factor 
KLF7                  0.184   Kruppel-like factor 7 (ubiquitous) 
SP6                   0.180   Sp6 transcription factor 
KLF8                  0.178   Kruppel-like factor 8 isoform 1 
WT1                   0.154   Wilms tumor 1 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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