CDH11 6585

Name: CDH11	Sequence: fasta or formatted (796aa)		NCBI GI: 16306532
Description: cadherin 11, type 2 preproprotein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 58 3 C cysteine 1.0 8 1 D aspartate 8.7 69 3 E glutamate 6.9 55 3 F phenylalanine 3.9 31 2 G glycine 7.2 57 3 H histidine 2.4 19 2 I isoleucine 7.2 57 2 K lysine 4.9 39 2 L leucine 6.4 51 2 M methionine 1.4 11 1 N asparagine 5.2 41 1 P proline 6.5 52 2 Q glutamine 3.3 26 1 R arginine 4.6 37 2 S serine 5.7 45 2 T threonine 6.2 49 2 V valine 7.4 59 2 W tryptophan 0.5 4 1 Y tyrosine 3.5 28 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 11, type 2 preproprotein CDH8 0.661 cadherin 8, type 2 preproprotein CDH18 0.567 cadherin 18, type 2 preproprotein CDH10 0.565 cadherin 10, type 2 preproprotein CDH6 0.565 cadherin 6, type 2 preproprotein CDH7 0.564 cadherin 7, type 2 preproprotein CDH7 0.564 cadherin 7, type 2 preproprotein CDH9 0.553 cadherin 9, type 2 preproprotein CDH12 0.545 cadherin 12, type 2 preproprotein CDH20 0.544 cadherin 20, type 2 preproprotein CDH24 0.523 cadherin-like 24 isoform 2 CDH24 0.511 cadherin-like 24 isoform 1 CDH22 0.476 cadherin 22 precursor CDH19 0.415 cadherin 19, type 2 preproprotein CDH5 0.323 cadherin 5, type 2 preproprotein CDH2 0.265 cadherin 2, type 1 preproprotein CDH4 0.265 cadherin 4, type 1 preproprotein CDH15 0.225 cadherin 15 preproprotein CDH1 0.219 cadherin 1, type 1 preproprotein CDH3 0.209 cadherin 3, type 1 preproprotein DSC1 0.151 desmocollin 1 isoform Dsc1a preproprotein DSC1 0.147 desmocollin 1 isoform Dsc1b preproprotein DSC2 0.140 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.138 desmocollin 3 isoform Dsc3a preproprotein CDH13 0.133 cadherin 13 preproprotein DSC2 0.133 desmocollin 2 isoform Dsc2b preproprotein DSC3 0.131 desmocollin 3 isoform Dsc3b preproprotein FAT1 0.124 FAT tumor suppressor 1 precursor CDH26 0.113 cadherin-like 26 isoform a CDH17 0.113 cadherin 17 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.