CDH7 6579

Name: CDH7	Sequence: fasta or formatted (785aa)		NCBI GI: 16306489
Description: cadherin 7, type 2 preproprotein		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt mRNA [785aa] cadherin 7, type 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 56 2 C cysteine 0.9 7 1 D aspartate 8.3 65 2 E glutamate 6.5 51 2 F phenylalanine 4.1 32 2 G glycine 6.0 47 3 H histidine 0.9 7 1 I isoleucine 6.8 53 2 K lysine 4.3 34 2 L leucine 7.5 59 2 M methionine 1.7 13 1 N asparagine 5.1 40 2 P proline 5.1 40 2 Q glutamine 3.8 30 1 R arginine 5.4 42 3 S serine 8.4 66 2 T threonine 6.6 52 3 V valine 7.1 56 2 W tryptophan 0.5 4 1 Y tyrosine 3.9 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 7, type 2 preproprotein CDH7 1.000 cadherin 7, type 2 preproprotein CDH20 0.619 cadherin 20, type 2 preproprotein CDH8 0.613 cadherin 8, type 2 preproprotein CDH10 0.608 cadherin 10, type 2 preproprotein CDH18 0.607 cadherin 18, type 2 preproprotein CDH6 0.605 cadherin 6, type 2 preproprotein CDH9 0.593 cadherin 9, type 2 preproprotein CDH12 0.588 cadherin 12, type 2 preproprotein CDH11 0.584 cadherin 11, type 2 preproprotein CDH22 0.549 cadherin 22 precursor CDH19 0.490 cadherin 19, type 2 preproprotein CDH24 0.474 cadherin-like 24 isoform 2 CDH24 0.462 cadherin-like 24 isoform 1 CDH5 0.318 cadherin 5, type 2 preproprotein CDH4 0.275 cadherin 4, type 1 preproprotein CDH2 0.270 cadherin 2, type 1 preproprotein CDH1 0.248 cadherin 1, type 1 preproprotein CDH3 0.232 cadherin 3, type 1 preproprotein CDH15 0.226 cadherin 15 preproprotein DSC1 0.163 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.163 desmocollin 1 isoform Dsc1a preproprotein CDH13 0.158 cadherin 13 preproprotein DSC3 0.154 desmocollin 3 isoform Dsc3b preproprotein DSC3 0.154 desmocollin 3 isoform Dsc3a preproprotein DSC2 0.153 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.153 desmocollin 2 isoform Dsc2a preproprotein FAT1 0.144 FAT tumor suppressor 1 precursor FAT4 0.132 FAT tumor suppressor homolog 4 FAT3 0.125 FAT tumor suppressor homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.