CDH2 4167

Name: CDH2	Sequence: fasta or formatted (906aa)		NCBI GI: 14589889
Description: cadherin 2, type 1 preproprotein		Referenced in: Cadherins and Related Proteins Left-Right Axis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 63 2 C cysteine 0.9 8 1 D aspartate 8.2 74 2 E glutamate 5.6 51 2 F phenylalanine 3.1 28 1 G glycine 6.4 58 3 H histidine 1.3 12 1 I isoleucine 7.6 69 3 K lysine 4.2 38 2 L leucine 7.8 71 2 M methionine 1.8 16 1 N asparagine 6.3 57 2 P proline 7.7 70 2 Q glutamine 4.6 42 2 R arginine 4.4 40 2 S serine 5.7 52 4 T threonine 6.4 58 2 V valine 7.2 65 2 W tryptophan 0.9 8 1 Y tyrosine 2.9 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 2, type 1 preproprotein CDH4 0.676 cadherin 4, type 1 preproprotein CDH1 0.394 cadherin 1, type 1 preproprotein CDH3 0.340 cadherin 3, type 1 preproprotein CDH15 0.314 cadherin 15 preproprotein CDH13 0.275 cadherin 13 preproprotein CDH11 0.234 cadherin 11, type 2 preproprotein CDH7 0.230 cadherin 7, type 2 preproprotein CDH7 0.230 cadherin 7, type 2 preproprotein CDH10 0.224 cadherin 10, type 2 preproprotein DSC1 0.224 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.224 desmocollin 1 isoform Dsc1a preproprotein CDH8 0.224 cadherin 8, type 2 preproprotein CDH6 0.222 cadherin 6, type 2 preproprotein CDH9 0.221 cadherin 9, type 2 preproprotein CDH12 0.219 cadherin 12, type 2 preproprotein DSC3 0.218 desmocollin 3 isoform Dsc3a preproprotein DSC2 0.215 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.215 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.215 desmocollin 3 isoform Dsc3b preproprotein CDH18 0.206 cadherin 18, type 2 preproprotein CDH20 0.204 cadherin 20, type 2 preproprotein CDH24 0.195 cadherin-like 24 isoform 2 CDH24 0.188 cadherin-like 24 isoform 1 CDH22 0.184 cadherin 22 precursor CDH26 0.184 cadherin-like 26 isoform a CDH5 0.182 cadherin 5, type 2 preproprotein DSG2 0.172 desmoglein 2 preproprotein DSG4 0.162 desmoglein 4 isoform 2 DSG4 0.158 desmoglein 4 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.