CDH17 14178

Name: CDH17	Sequence: fasta or formatted (832aa)		NCBI GI: 221316595
Description: cadherin 17 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt mRNA [832aa] cadherin 17 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 45 2 C cysteine 0.8 7 1 D aspartate 6.5 54 3 E glutamate 6.4 53 2 F phenylalanine 4.7 39 2 G glycine 6.7 56 2 H histidine 2.0 17 1 I isoleucine 7.5 62 2 K lysine 5.4 45 2 L leucine 8.4 70 2 M methionine 1.3 11 1 N asparagine 5.4 45 2 P proline 6.4 53 2 Q glutamine 4.3 36 1 R arginine 3.5 29 1 S serine 6.9 57 2 T threonine 6.9 57 2 V valine 7.7 64 2 W tryptophan 0.5 4 1 Y tyrosine 3.4 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 17 precursor CDH17 1.000 cadherin 17 precursor CDH16 0.198 cadherin 16 precursor CDH4 0.142 cadherin 4, type 1 preproprotein CDH2 0.140 cadherin 2, type 1 preproprotein DSC3 0.134 desmocollin 3 isoform Dsc3b preproprotein DSC3 0.134 desmocollin 3 isoform Dsc3a preproprotein DSC2 0.133 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.133 desmocollin 2 isoform Dsc2a preproprotein CDH13 0.130 cadherin 13 preproprotein CDH18 0.117 cadherin 18, type 2 preproprotein CDH1 0.114 cadherin 1, type 1 preproprotein FAT1 0.112 FAT tumor suppressor 1 precursor CDH10 0.111 cadherin 10, type 2 preproprotein CDH15 0.110 cadherin 15 preproprotein CDH26 0.110 cadherin-like 26 isoform a CDH11 0.109 cadherin 11, type 2 preproprotein DSC1 0.108 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.108 desmocollin 1 isoform Dsc1a preproprotein CDH20 0.108 cadherin 20, type 2 preproprotein CDH8 0.108 cadherin 8, type 2 preproprotein FAT3 0.104 FAT tumor suppressor homolog 3 CDH12 0.104 cadherin 12, type 2 preproprotein CDH24 0.104 cadherin-like 24 isoform 2 CDH6 0.102 cadherin 6, type 2 preproprotein CELSR3 0.102 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... FAT4 0.100 FAT tumor suppressor homolog 4 CDH3 0.100 cadherin 3, type 1 preproprotein CDH7 0.098 cadherin 7, type 2 preproprotein CDH7 0.098 cadherin 7, type 2 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.