CDH5 6898

Name: CDH5	Sequence: fasta or formatted (784aa)		NCBI GI: 166362713
Description: cadherin 5, type 2 preproprotein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 56 3 C cysteine 0.8 6 1 D aspartate 7.8 61 2 E glutamate 6.6 52 2 F phenylalanine 3.7 29 2 G glycine 6.2 49 3 H histidine 2.9 23 2 I isoleucine 6.1 48 2 K lysine 5.4 42 2 L leucine 7.1 56 2 M methionine 1.9 15 2 N asparagine 4.3 34 2 P proline 5.5 43 2 Q glutamine 4.0 31 2 R arginine 5.1 40 3 S serine 6.0 47 2 T threonine 7.1 56 2 V valine 7.9 62 2 W tryptophan 0.6 5 1 Y tyrosine 3.7 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 5, type 2 preproprotein CDH20 0.337 cadherin 20, type 2 preproprotein CDH11 0.330 cadherin 11, type 2 preproprotein CDH18 0.329 cadherin 18, type 2 preproprotein CDH9 0.325 cadherin 9, type 2 preproprotein CDH10 0.325 cadherin 10, type 2 preproprotein CDH6 0.325 cadherin 6, type 2 preproprotein CDH8 0.323 cadherin 8, type 2 preproprotein CDH7 0.314 cadherin 7, type 2 preproprotein CDH7 0.314 cadherin 7, type 2 preproprotein CDH24 0.311 cadherin-like 24 isoform 2 CDH12 0.305 cadherin 12, type 2 preproprotein CDH24 0.302 cadherin-like 24 isoform 1 CDH19 0.293 cadherin 19, type 2 preproprotein CDH22 0.282 cadherin 22 precursor CDH2 0.212 cadherin 2, type 1 preproprotein CDH4 0.209 cadherin 4, type 1 preproprotein CDH15 0.195 cadherin 15 preproprotein CDH1 0.181 cadherin 1, type 1 preproprotein CDH3 0.167 cadherin 3, type 1 preproprotein CDH13 0.125 cadherin 13 preproprotein CDH26 0.120 cadherin-like 26 isoform a FAT3 0.113 FAT tumor suppressor homolog 3 DSC1 0.112 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.112 desmocollin 1 isoform Dsc1a preproprotein FAT1 0.108 FAT tumor suppressor 1 precursor CELSR2 0.107 cadherin EGF LAG seven-pass G-type receptor 2 DSC3 0.104 desmocollin 3 isoform Dsc3a preproprotein DSC3 0.103 desmocollin 3 isoform Dsc3b preproprotein FAT4 0.101 FAT tumor suppressor homolog 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.