CDH3 4168

Name: CDH3	Sequence: fasta or formatted (829aa)		NCBI GI: 14589891
Description: cadherin 3, type 1 preproprotein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 52 2 C cysteine 1.1 9 1 D aspartate 8.4 70 2 E glutamate 7.4 61 2 F phenylalanine 3.1 26 1 G glycine 7.1 59 3 H histidine 2.3 19 1 I isoleucine 4.6 38 2 K lysine 4.3 36 2 L leucine 9.2 76 4 M methionine 1.6 13 1 N asparagine 4.2 35 2 P proline 7.4 61 2 Q glutamine 3.9 32 1 R arginine 4.3 36 2 S serine 5.3 44 2 T threonine 7.6 63 3 V valine 8.2 68 2 W tryptophan 1.0 8 1 Y tyrosine 2.8 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 3, type 1 preproprotein CDH1 0.540 cadherin 1, type 1 preproprotein CDH2 0.369 cadherin 2, type 1 preproprotein CDH4 0.356 cadherin 4, type 1 preproprotein CDH15 0.284 cadherin 15 preproprotein CDH7 0.214 cadherin 7, type 2 preproprotein CDH7 0.214 cadherin 7, type 2 preproprotein CDH13 0.213 cadherin 13 preproprotein CDH6 0.205 cadherin 6, type 2 preproprotein CDH9 0.202 cadherin 9, type 2 preproprotein CDH18 0.200 cadherin 18, type 2 preproprotein CDH11 0.200 cadherin 11, type 2 preproprotein CDH10 0.196 cadherin 10, type 2 preproprotein DSC2 0.194 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.194 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.194 desmocollin 3 isoform Dsc3b preproprotein DSC3 0.194 desmocollin 3 isoform Dsc3a preproprotein CDH8 0.191 cadherin 8, type 2 preproprotein CDH12 0.190 cadherin 12, type 2 preproprotein CDH20 0.190 cadherin 20, type 2 preproprotein DSC1 0.186 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.186 desmocollin 1 isoform Dsc1a preproprotein CDH26 0.170 cadherin-like 26 isoform a CDH19 0.170 cadherin 19, type 2 preproprotein CDH24 0.161 cadherin-like 24 isoform 2 CDH5 0.156 cadherin 5, type 2 preproprotein CDH22 0.155 cadherin 22 precursor CDH24 0.153 cadherin-like 24 isoform 1 DSG4 0.145 desmoglein 4 isoform 1 DSG4 0.145 desmoglein 4 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.