CDH15 30975

Name: CDH15	Sequence: fasta or formatted (814aa)		NCBI GI: 4826669
Description: cadherin 15 preproprotein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 72 3 C cysteine 0.9 7 1 D aspartate 8.2 67 2 E glutamate 5.8 47 2 F phenylalanine 2.8 23 2 G glycine 8.1 66 3 H histidine 2.1 17 1 I isoleucine 3.3 27 2 K lysine 1.8 15 1 L leucine 12.8 104 4 M methionine 0.6 5 1 N asparagine 2.5 20 1 P proline 8.4 68 4 Q glutamine 5.2 42 2 R arginine 7.2 59 2 S serine 6.1 50 2 T threonine 4.9 40 2 V valine 6.9 56 3 W tryptophan 1.2 10 1 Y tyrosine 2.3 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 15 preproprotein CDH4 0.358 cadherin 4, type 1 preproprotein CDH2 0.351 cadherin 2, type 1 preproprotein CDH3 0.292 cadherin 3, type 1 preproprotein CDH1 0.291 cadherin 1, type 1 preproprotein CDH11 0.222 cadherin 11, type 2 preproprotein CDH12 0.216 cadherin 12, type 2 preproprotein CDH7 0.215 cadherin 7, type 2 preproprotein CDH7 0.215 cadherin 7, type 2 preproprotein CDH13 0.214 cadherin 13 preproprotein CDH6 0.210 cadherin 6, type 2 preproprotein CDH18 0.210 cadherin 18, type 2 preproprotein CDH8 0.209 cadherin 8, type 2 preproprotein CDH10 0.209 cadherin 10, type 2 preproprotein CDH20 0.207 cadherin 20, type 2 preproprotein DSC2 0.202 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.202 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.197 desmocollin 3 isoform Dsc3b preproprotein DSC3 0.197 desmocollin 3 isoform Dsc3a preproprotein CDH9 0.197 cadherin 9, type 2 preproprotein CDH24 0.197 cadherin-like 24 isoform 2 CDH24 0.189 cadherin-like 24 isoform 1 CDH5 0.188 cadherin 5, type 2 preproprotein CDH22 0.188 cadherin 22 precursor DSG4 0.171 desmoglein 4 isoform 2 CDH19 0.171 cadherin 19, type 2 preproprotein DSC1 0.168 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.168 desmocollin 1 isoform Dsc1a preproprotein DSG4 0.165 desmoglein 4 isoform 1 DSG2 0.157 desmoglein 2 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.