DSC2 3399

Name: DSC2	Sequence: fasta or formatted (847aa)		NCBI GI: 13435366
Description: desmocollin 2 isoform Dsc2b preproprotein		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [901aa] desmocollin 2 isoform Dsc2a preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 41 2 C cysteine 2.5 21 1 D aspartate 6.0 51 2 E glutamate 6.5 55 2 F phenylalanine 3.3 28 1 G glycine 6.8 58 4 H histidine 1.9 16 3 I isoleucine 6.8 58 2 K lysine 5.1 43 3 L leucine 7.8 66 4 M methionine 1.4 12 1 N asparagine 5.2 44 1 P proline 5.2 44 2 Q glutamine 4.0 34 2 R arginine 4.7 40 2 S serine 7.0 59 3 T threonine 9.9 84 3 V valine 7.2 61 2 W tryptophan 0.8 7 1 Y tyrosine 3.0 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.987 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.663 desmocollin 3 isoform Dsc3b preproprotein DSC3 0.655 desmocollin 3 isoform Dsc3a preproprotein DSC1 0.491 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.478 desmocollin 1 isoform Dsc1a preproprotein CDH2 0.229 cadherin 2, type 1 preproprotein CDH4 0.211 cadherin 4, type 1 preproprotein CDH1 0.195 cadherin 1, type 1 preproprotein CDH15 0.193 cadherin 15 preproprotein CDH3 0.191 cadherin 3, type 1 preproprotein CDH13 0.180 cadherin 13 preproprotein DSG4 0.176 desmoglein 4 isoform 2 DSG4 0.174 desmoglein 4 isoform 1 CDH26 0.173 cadherin-like 26 isoform a DSG2 0.163 desmoglein 2 preproprotein DSG3 0.160 desmoglein 3 preproprotein CDH7 0.139 cadherin 7, type 2 preproprotein CDH7 0.139 cadherin 7, type 2 preproprotein DSG1 0.131 desmoglein 1 preproprotein CDH18 0.130 cadherin 18, type 2 preproprotein CDH17 0.129 cadherin 17 precursor CDH17 0.129 cadherin 17 precursor CDH11 0.125 cadherin 11, type 2 preproprotein CDH10 0.123 cadherin 10, type 2 preproprotein CDH20 0.121 cadherin 20, type 2 preproprotein CDH6 0.118 cadherin 6, type 2 preproprotein CDH8 0.117 cadherin 8, type 2 preproprotein CDH9 0.112 cadherin 9, type 2 preproprotein CDH12 0.112 cadherin 12, type 2 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.