CDH6 30977

Name: CDH6	Sequence: fasta or formatted (790aa)		NCBI GI: 4826673
Description: cadherin 6, type 2 preproprotein		Referenced in: Cadherins and Related Proteins Kidney DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 49 2 C cysteine 0.6 5 1 D aspartate 8.9 70 2 E glutamate 6.3 50 2 F phenylalanine 3.8 30 2 G glycine 6.1 48 3 H histidine 1.4 11 2 I isoleucine 6.5 51 2 K lysine 5.2 41 3 L leucine 7.7 61 3 M methionine 1.4 11 1 N asparagine 5.1 40 2 P proline 5.3 42 2 Q glutamine 3.9 31 1 R arginine 5.2 41 2 S serine 7.0 55 2 T threonine 7.8 62 3 V valine 6.8 54 2 W tryptophan 0.6 5 1 Y tyrosine 4.2 33 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 6, type 2 preproprotein CDH10 0.745 cadherin 10, type 2 preproprotein CDH9 0.736 cadherin 9, type 2 preproprotein CDH12 0.616 cadherin 12, type 2 preproprotein CDH7 0.595 cadherin 7, type 2 preproprotein CDH7 0.595 cadherin 7, type 2 preproprotein CDH8 0.578 cadherin 8, type 2 preproprotein CDH11 0.576 cadherin 11, type 2 preproprotein CDH20 0.575 cadherin 20, type 2 preproprotein CDH18 0.571 cadherin 18, type 2 preproprotein CDH22 0.489 cadherin 22 precursor CDH24 0.470 cadherin-like 24 isoform 2 CDH24 0.457 cadherin-like 24 isoform 1 CDH19 0.437 cadherin 19, type 2 preproprotein CDH5 0.324 cadherin 5, type 2 preproprotein CDH4 0.259 cadherin 4, type 1 preproprotein CDH2 0.257 cadherin 2, type 1 preproprotein CDH1 0.236 cadherin 1, type 1 preproprotein CDH15 0.218 cadherin 15 preproprotein CDH3 0.218 cadherin 3, type 1 preproprotein DSC3 0.142 desmocollin 3 isoform Dsc3a preproprotein DSC3 0.138 desmocollin 3 isoform Dsc3b preproprotein DSC1 0.135 desmocollin 1 isoform Dsc1a preproprotein DSC1 0.132 desmocollin 1 isoform Dsc1b preproprotein DSC2 0.131 desmocollin 2 isoform Dsc2a preproprotein DSC2 0.128 desmocollin 2 isoform Dsc2b preproprotein FAT1 0.128 FAT tumor suppressor 1 precursor CDH13 0.123 cadherin 13 preproprotein FAT4 0.119 FAT tumor suppressor homolog 4 FAT3 0.117 FAT tumor suppressor homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.