CDH18 30976

Name: CDH18	Sequence: fasta or formatted (790aa)		NCBI GI: 4826671
Description: cadherin 18, type 2 preproprotein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 44 2 C cysteine 1.3 10 1 D aspartate 8.0 63 2 E glutamate 6.7 53 2 F phenylalanine 3.4 27 2 G glycine 6.2 49 3 H histidine 2.5 20 2 I isoleucine 7.1 56 2 K lysine 4.7 37 3 L leucine 7.5 59 2 M methionine 1.6 13 1 N asparagine 4.6 36 1 P proline 5.1 40 2 Q glutamine 3.2 25 1 R arginine 5.3 42 4 S serine 7.7 61 4 T threonine 8.1 64 2 V valine 7.2 57 2 W tryptophan 0.5 4 1 Y tyrosine 3.8 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 18, type 2 preproprotein CDH7 0.596 cadherin 7, type 2 preproprotein CDH7 0.596 cadherin 7, type 2 preproprotein CDH10 0.587 cadherin 10, type 2 preproprotein CDH12 0.583 cadherin 12, type 2 preproprotein CDH11 0.576 cadherin 11, type 2 preproprotein CDH9 0.573 cadherin 9, type 2 preproprotein CDH6 0.569 cadherin 6, type 2 preproprotein CDH20 0.566 cadherin 20, type 2 preproprotein CDH8 0.564 cadherin 8, type 2 preproprotein CDH22 0.495 cadherin 22 precursor CDH24 0.479 cadherin-like 24 isoform 2 CDH24 0.467 cadherin-like 24 isoform 1 CDH19 0.418 cadherin 19, type 2 preproprotein CDH5 0.327 cadherin 5, type 2 preproprotein CDH4 0.238 cadherin 4, type 1 preproprotein CDH2 0.238 cadherin 2, type 1 preproprotein CDH1 0.223 cadherin 1, type 1 preproprotein CDH15 0.217 cadherin 15 preproprotein CDH3 0.212 cadherin 3, type 1 preproprotein DSC1 0.159 desmocollin 1 isoform Dsc1a preproprotein DSC1 0.157 desmocollin 1 isoform Dsc1b preproprotein DSC3 0.156 desmocollin 3 isoform Dsc3a preproprotein DSC3 0.152 desmocollin 3 isoform Dsc3b preproprotein DSC2 0.142 desmocollin 2 isoform Dsc2a preproprotein CDH13 0.141 cadherin 13 preproprotein DSC2 0.140 desmocollin 2 isoform Dsc2b preproprotein FAT1 0.132 FAT tumor suppressor 1 precursor CDH26 0.124 cadherin-like 26 isoform a CDH17 0.123 cadherin 17 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.