CDH22 7007

Name: CDH22	Sequence: fasta or formatted (828aa)		NCBI GI: 16753221
Description: cadherin 22 precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 73 2 C cysteine 0.6 5 1 D aspartate 8.7 72 2 E glutamate 5.9 49 2 F phenylalanine 3.7 31 2 G glycine 9.3 77 3 H histidine 2.4 20 2 I isoleucine 4.6 38 2 K lysine 2.2 18 1 L leucine 8.9 74 7 M methionine 1.3 11 1 N asparagine 2.2 18 1 P proline 6.6 55 4 Q glutamine 4.1 34 1 R arginine 5.9 49 2 S serine 8.1 67 3 T threonine 5.9 49 2 V valine 7.6 63 2 W tryptophan 0.6 5 1 Y tyrosine 2.4 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 22 precursor CDH7 0.516 cadherin 7, type 2 preproprotein CDH7 0.516 cadherin 7, type 2 preproprotein CDH20 0.495 cadherin 20, type 2 preproprotein CDH8 0.478 cadherin 8, type 2 preproprotein CDH9 0.477 cadherin 9, type 2 preproprotein CDH10 0.476 cadherin 10, type 2 preproprotein CDH18 0.475 cadherin 18, type 2 preproprotein CDH6 0.468 cadherin 6, type 2 preproprotein CDH12 0.467 cadherin 12, type 2 preproprotein CDH11 0.465 cadherin 11, type 2 preproprotein CDH24 0.398 cadherin-like 24 isoform 2 CDH24 0.387 cadherin-like 24 isoform 1 CDH19 0.381 cadherin 19, type 2 preproprotein CDH5 0.269 cadherin 5, type 2 preproprotein CDH4 0.213 cadherin 4, type 1 preproprotein CDH2 0.204 cadherin 2, type 1 preproprotein CDH15 0.186 cadherin 15 preproprotein CDH1 0.171 cadherin 1, type 1 preproprotein CDH3 0.158 cadherin 3, type 1 preproprotein DSC3 0.128 desmocollin 3 isoform Dsc3a preproprotein DSC3 0.127 desmocollin 3 isoform Dsc3b preproprotein CDH13 0.126 cadherin 13 preproprotein DSC1 0.118 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.118 desmocollin 1 isoform Dsc1a preproprotein DSC2 0.112 desmocollin 2 isoform Dsc2a preproprotein FAT4 0.111 FAT tumor suppressor homolog 4 FAT1 0.111 FAT tumor suppressor 1 precursor DSC2 0.110 desmocollin 2 isoform Dsc2b preproprotein FAT3 0.101 FAT tumor suppressor homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.