DSC1 30984

Name: DSC1	Sequence: fasta or formatted (840aa)		NCBI GI: 4826702
Description: desmocollin 1 isoform Dsc1b preproprotein		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [894aa] desmocollin 1 isoform Dsc1a preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 39 2 C cysteine 2.4 20 1 D aspartate 6.8 57 2 E glutamate 6.4 54 2 F phenylalanine 3.8 32 2 G glycine 6.4 54 3 H histidine 2.1 18 1 I isoleucine 6.4 54 2 K lysine 5.8 49 2 L leucine 8.2 69 3 M methionine 1.4 12 1 N asparagine 5.0 42 2 P proline 5.5 46 2 Q glutamine 5.4 45 2 R arginine 4.5 38 2 S serine 6.8 57 2 T threonine 7.6 64 4 V valine 7.0 59 2 W tryptophan 0.6 5 1 Y tyrosine 3.1 26 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.988 desmocollin 1 isoform Dsc1a preproprotein DSC2 0.494 desmocollin 2 isoform Dsc2b preproprotein DSC2 0.482 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.474 desmocollin 3 isoform Dsc3b preproprotein DSC3 0.466 desmocollin 3 isoform Dsc3a preproprotein CDH2 0.240 cadherin 2, type 1 preproprotein CDH4 0.216 cadherin 4, type 1 preproprotein CDH1 0.211 cadherin 1, type 1 preproprotein CDH3 0.184 cadherin 3, type 1 preproprotein CDH13 0.168 cadherin 13 preproprotein DSG4 0.165 desmoglein 4 isoform 1 DSG4 0.165 desmoglein 4 isoform 2 DSG2 0.163 desmoglein 2 preproprotein CDH15 0.162 cadherin 15 preproprotein CDH26 0.160 cadherin-like 26 isoform a DSG3 0.152 desmoglein 3 preproprotein CDH7 0.149 cadherin 7, type 2 preproprotein CDH7 0.149 cadherin 7, type 2 preproprotein CDH18 0.146 cadherin 18, type 2 preproprotein CDH11 0.139 cadherin 11, type 2 preproprotein CDH10 0.135 cadherin 10, type 2 preproprotein CDH20 0.132 cadherin 20, type 2 preproprotein CDH12 0.131 cadherin 12, type 2 preproprotein CDH8 0.131 cadherin 8, type 2 preproprotein CDH6 0.123 cadherin 6, type 2 preproprotein CDH9 0.120 cadherin 9, type 2 preproprotein CDH24 0.115 cadherin-like 24 isoform 2 CDH22 0.115 cadherin 22 precursor DSG1 0.115 desmoglein 1 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.