CDH20 6586

Name: CDH20	Sequence: fasta or formatted (801aa)		NCBI GI: 16306537
Description: cadherin 20, type 2 preproprotein		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 56 2 C cysteine 0.7 6 1 D aspartate 8.1 65 3 E glutamate 6.2 50 2 F phenylalanine 4.2 34 2 G glycine 6.6 53 3 H histidine 1.6 13 1 I isoleucine 6.0 48 2 K lysine 3.1 25 2 L leucine 7.7 62 2 M methionine 2.9 23 1 N asparagine 4.0 32 2 P proline 6.0 48 2 Q glutamine 4.5 36 2 R arginine 4.9 39 2 S serine 7.7 62 2 T threonine 6.9 55 3 V valine 7.0 56 2 W tryptophan 1.2 10 1 Y tyrosine 3.5 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin 20, type 2 preproprotein CDH7 0.597 cadherin 7, type 2 preproprotein CDH7 0.597 cadherin 7, type 2 preproprotein CDH6 0.565 cadherin 6, type 2 preproprotein CDH10 0.563 cadherin 10, type 2 preproprotein CDH8 0.558 cadherin 8, type 2 preproprotein CDH18 0.556 cadherin 18, type 2 preproprotein CDH11 0.544 cadherin 11, type 2 preproprotein CDH9 0.544 cadherin 9, type 2 preproprotein CDH12 0.539 cadherin 12, type 2 preproprotein CDH22 0.508 cadherin 22 precursor CDH24 0.464 cadherin-like 24 isoform 2 CDH24 0.452 cadherin-like 24 isoform 1 CDH19 0.439 cadherin 19, type 2 preproprotein CDH5 0.330 cadherin 5, type 2 preproprotein CDH4 0.237 cadherin 4, type 1 preproprotein CDH2 0.232 cadherin 2, type 1 preproprotein CDH15 0.211 cadherin 15 preproprotein CDH1 0.206 cadherin 1, type 1 preproprotein CDH3 0.198 cadherin 3, type 1 preproprotein CDH13 0.145 cadherin 13 preproprotein DSC3 0.142 desmocollin 3 isoform Dsc3a preproprotein DSC1 0.139 desmocollin 1 isoform Dsc1b preproprotein DSC1 0.139 desmocollin 1 isoform Dsc1a preproprotein DSC3 0.138 desmocollin 3 isoform Dsc3b preproprotein DSC2 0.134 desmocollin 2 isoform Dsc2a preproprotein DSC2 0.129 desmocollin 2 isoform Dsc2b preproprotein FAT1 0.125 FAT tumor suppressor 1 precursor FAT4 0.125 FAT tumor suppressor homolog 4 CDH26 0.122 cadherin-like 26 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.