DSC1 3397

Name: DSC1	Sequence: fasta or formatted (894aa)		NCBI GI: 13435361
Description: desmocollin 1 isoform Dsc1a preproprotein		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [840aa] desmocollin 1 isoform Dsc1b preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 41 2 C cysteine 2.9 26 2 D aspartate 6.8 61 2 E glutamate 6.9 62 3 F phenylalanine 3.8 34 2 G glycine 6.6 59 3 H histidine 2.2 20 1 I isoleucine 5.9 53 2 K lysine 6.2 55 2 L leucine 8.3 74 3 M methionine 1.3 12 1 N asparagine 4.7 42 2 P proline 5.3 47 2 Q glutamine 5.3 47 2 R arginine 4.4 39 2 S serine 6.7 60 2 T threonine 7.3 65 4 V valine 6.9 62 2 W tryptophan 0.6 5 1 Y tyrosine 3.4 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 desmocollin 1 isoform Dsc1a preproprotein DSC1 0.922 desmocollin 1 isoform Dsc1b preproprotein DSC2 0.513 desmocollin 2 isoform Dsc2a preproprotein DSC3 0.484 desmocollin 3 isoform Dsc3a preproprotein DSC2 0.450 desmocollin 2 isoform Dsc2b preproprotein DSC3 0.435 desmocollin 3 isoform Dsc3b preproprotein CDH2 0.225 cadherin 2, type 1 preproprotein CDH4 0.202 cadherin 4, type 1 preproprotein CDH1 0.197 cadherin 1, type 1 preproprotein DSG4 0.176 desmoglein 4 isoform 2 CDH3 0.172 cadherin 3, type 1 preproprotein DSG4 0.171 desmoglein 4 isoform 1 DSG2 0.166 desmoglein 2 preproprotein DSG3 0.160 desmoglein 3 preproprotein CDH13 0.157 cadherin 13 preproprotein CDH15 0.151 cadherin 15 preproprotein CDH26 0.149 cadherin-like 26 isoform a CDH7 0.139 cadherin 7, type 2 preproprotein CDH7 0.139 cadherin 7, type 2 preproprotein CDH18 0.138 cadherin 18, type 2 preproprotein CDH11 0.133 cadherin 11, type 2 preproprotein CDH10 0.126 cadherin 10, type 2 preproprotein CDH8 0.125 cadherin 8, type 2 preproprotein CDH20 0.123 cadherin 20, type 2 preproprotein CDH12 0.122 cadherin 12, type 2 preproprotein CDH6 0.117 cadherin 6, type 2 preproprotein CDH9 0.112 cadherin 9, type 2 preproprotein CDH24 0.107 cadherin-like 24 isoform 2 CDH22 0.107 cadherin 22 precursor DSG1 0.107 desmoglein 1 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.