Guide to the Human Genome
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Search of human proteins with 158508495

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
         (414 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|158508495 sex comb on midleg-like 4 [Homo sapiens]                 837   0.0  
gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]              337   1e-92
gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]             337   2e-92
gi|5174669 sex comb on midleg-like 2 [Homo sapiens]                   226   2e-59
gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]           101   1e-21
gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]        100   2e-21
gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]        100   2e-21
gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]        100   2e-21
gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]        100   2e-21
gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens]            89   7e-18
gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens]            89   7e-18
gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens]            89   7e-18
gi|62953127 polyhomeotic 1-like [Homo sapiens]                         68   2e-11
gi|148612879 polyhomeotic like 3 [Homo sapiens]                        64   2e-10
gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]               59   1e-08
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]               59   1e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     56   5e-08
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]    54   2e-07
gi|158138528 l(3)mbt-like 4 [Homo sapiens]                             49   6e-06
gi|58293756 sterile alpha motif domain containing 13 isoform 1 [...    47   2e-05
gi|197927257 sterile alpha motif domain containing 13 isoform 2 ...    47   4e-05
gi|197927255 sterile alpha motif domain containing 13 isoform 2 ...    47   4e-05
gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]     46   5e-05
gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]                    44   3e-04
gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]                    44   3e-04
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]            39   0.007
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    38   0.019
gi|157909822 pragmin [Homo sapiens]                                    37   0.033
gi|33286436 gametogenetin [Homo sapiens]                               37   0.033
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        37   0.043

>gi|158508495 sex comb on midleg-like 4 [Homo sapiens]
          Length = 414

 Score =  837 bits (2161), Expect = 0.0
 Identities = 414/414 (100%), Positives = 414/414 (100%)

Query: 1   MQSQRIPGRKRGRPSLHSTPMKMAVHNLYSASAGSLPAVKIPKKRGRKPGYKIKSRVLMT 60
           MQSQRIPGRKRGRPSLHSTPMKMAVHNLYSASAGSLPAVKIPKKRGRKPGYKIKSRVLMT
Sbjct: 1   MQSQRIPGRKRGRPSLHSTPMKMAVHNLYSASAGSLPAVKIPKKRGRKPGYKIKSRVLMT 60

Query: 61  PLALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQLPE 120
           PLALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQLPE
Sbjct: 61  PLALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQLPE 120

Query: 121 HFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPVVN 180
           HFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPVVN
Sbjct: 121 HFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPVVN 180

Query: 181 SIGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMESVKTVTTEEYLVNP 240
           SIGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMESVKTVTTEEYLVNP
Sbjct: 181 SIGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMESVKTVTTEEYLVNP 240

Query: 241 VGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGP 300
           VGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGP
Sbjct: 241 VGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGP 300

Query: 301 SAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADP 360
           SAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADP
Sbjct: 301 SAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADP 360

Query: 361 QALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF 414
           QALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF
Sbjct: 361 QALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF 414


>gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]
          Length = 591

 Score =  337 bits (864), Expect = 1e-92
 Identities = 204/413 (49%), Positives = 256/413 (61%), Gaps = 46/413 (11%)

Query: 2   QSQRIPGRKRGRPSLHSTPMKMAVHNLYSASAGSLPAVKIPKKRGRKPGYKIKSRVLMTP 61
           Q  R PG+KRGR     TP  +  H + + S  + P +K PKKRG KPG K K R L+ P
Sbjct: 225 QRGRKPGKKRGR-----TPKTLISHPISAPSKTAEP-LKFPKKRGPKPGSKRKPRTLLNP 278

Query: 62  LALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQLPEH 121
              SP  STPEPD S++PQDAAT+PS +A QA TVC+Y+NK  + GP+L++KKVQQLP+H
Sbjct: 279 PPASPTTSTPEPDTSTVPQDAATIPS-SAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDH 337

Query: 122 FGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPVVNS 181
           FGP R S VLQQAVQACIDCA+ QK VFS +KQG+GGE+  +SA FD +QH  +LP VNS
Sbjct: 338 FGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEV--ISAVFDREQHTLNLPAVNS 395

Query: 182 IGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQEKEEGRMESVKTVTTEEYLVNPV 241
           I YVLRFL KLC +L  D+LF +QPF                  ++  ++T  EY     
Sbjct: 396 ITYVLRFLEKLCHNLRSDNLFGNQPF-----------------TQTHLSLTAIEY---SH 435

Query: 242 GMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPS 301
             +RY       TF    SL  S   +    +S  +         +   R  P+     S
Sbjct: 436 SHDRY---LPGETFVLGNSLARSLEPHSDSMDSASNPTN----LVSTSQRHRPLL----S 484

Query: 302 APGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADPQ 361
           + GL P  +S  R   S   +R   S     +DA R   R+PS+WTVEDV+ FV++ADPQ
Sbjct: 485 SCGLPPSTASAVRRLCSRGSDRYLES-----RDASRLSGRDPSSWTVEDVMQFVREADPQ 539

Query: 362 ALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF 414
            LGPH +LFRKHEIDG ALLLL+SDM+MKY+GLKLGPALKL YHID+LKQ KF
Sbjct: 540 -LGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF 591


>gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]
          Length = 660

 Score =  337 bits (863), Expect = 2e-92
 Identities = 201/416 (48%), Positives = 266/416 (63%), Gaps = 30/416 (7%)

Query: 2   QSQRIPGRKRGRPSLHSTPMKMAVHNLYSASAGSLPAVKIPKKRGRKPGYKIKSRVLMTP 61
           Q  R PG+KRGR     TP  +  H + + S  + P +K PKKRG KPG K K R L+ P
Sbjct: 272 QRGRKPGKKRGR-----TPKTLISHPISAPSKTAEP-LKFPKKRGPKPGSKRKPRTLLNP 325

Query: 62  LALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQLPEH 121
              SP  STPEPD S++PQDAAT+PS +A QA TVC+Y+NK  + GP+L++KKVQQLP+H
Sbjct: 326 PPASPTTSTPEPDTSTVPQDAATIPS-SAMQAPTVCIYLNKNGSTGPHLDKKKVQQLPDH 384

Query: 122 FGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQGYGGEMVSVSASFDGKQHLRSLPVVNS 181
           FGP R S VLQQAVQACIDCA+ QK VFS +KQG+GGE+  +SA FD +QH  +LP VNS
Sbjct: 385 FGPARASVVLQQAVQACIDCAYHQKTVFSFLKQGHGGEV--ISAVFDREQHTLNLPAVNS 442

Query: 182 IGYVLRFLAKLCRSLLCDDLFSHQPFPRGCSASEKVQ-EKEEGRMESVKTVTTEEYLVNP 240
           I YVLRFL KLC +L  D+LF +QPF +   +   ++      R    +T      L   
Sbjct: 443 ITYVLRFLEKLCHNLRSDNLFGNQPFTQTHLSLTAIEYSHSHDRYLPGETFVLGNSLARS 502

Query: 241 VGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGP 300
           +  +  S+D+++         +P++ +   +++       G P +TA   R   + S G 
Sbjct: 503 LEPHSDSMDSAS---------NPTNLVSTSQRHRPLLSSCGLPPSTASAVRR--LCSRGV 551

Query: 301 SAPGLRPPASSPKRNTTSL-EGNRCASSPSQ-DAQDARRPRSRNPSAWTVEDVVWFVKDA 358
                    S+ +R+  S  + NR   S    +++DA R   R+PS+WTVEDV+ FV++A
Sbjct: 552 L------KGSNERRDMESFWKLNRSPGSDRYLESRDASRLSGRDPSSWTVEDVMQFVREA 605

Query: 359 DPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF 414
           DPQ LGPH +LFRKHEIDG ALLLL+SDM+MKY+GLKLGPALKL YHID+LKQ KF
Sbjct: 606 DPQ-LGPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLSYHIDRLKQGKF 660


>gi|5174669 sex comb on midleg-like 2 [Homo sapiens]
          Length = 700

 Score =  226 bits (577), Expect = 2e-59
 Identities = 148/412 (35%), Positives = 218/412 (52%), Gaps = 57/412 (13%)

Query: 42  PKKRGRKPGYKIKSRVLMTPLALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYIN 101
           P+K+G   G K K   ++   + +  +S    D   + +D A+ P        TVC+Y+N
Sbjct: 306 PRKKGPNSGKKEKPLPVICSTSAASLKSLTR-DRGMLYKDVASGPCKIVMS--TVCVYVN 362

Query: 102 KQANAGPYLERKKVQQLPEHFGPERPSAVLQQAVQACIDCAHQQKLVFSLVK-QGYGGEM 160
           K  N GP+L+ K++QQLP+HFGP   + VL++ VQAC+DCA + K VF  +K    GGE+
Sbjct: 363 KHGNFGPHLDPKRIQQLPDHFGPGPVNVVLRRIVQACVDCALETKTVFGYLKPDNRGGEV 422

Query: 161 VSVSASFDGKQHLRSLPVVNSIGYVLRFLAKLCRSLLCDDLFSHQPFP------------ 208
           ++  ASFDG+ H   LP VNS  + LRFL   C SL CD+L S QPF             
Sbjct: 423 IT--ASFDGETHSIQLPPVNSASFALRFLENFCHSLQCDNLLSSQPFSSSRGHTHSSAEH 480

Query: 209 -RGCSASEKVQEKEEGRMESVKTVT-----------TEEYLVNPVGM----------NRY 246
            +  SA E V E++  +    +TV            T+EY      +             
Sbjct: 481 DKNQSAKEDVTERQSTKRSPQQTVPYVVPLSPKLPKTKEYASEGEPLFAGGSAIPKEENL 540

Query: 247 SVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLR 306
           S D+ +S+ N    L+P+    C+      + +    + +  G  +SP+        G  
Sbjct: 541 SEDSKSSSLNSGNYLNPA----CRNPMYIHTSVSQDFSRSVPGTTSSPLV-------GDI 589

Query: 307 PPASSPKRNTTSLEGNRCASSPSQ----DAQDARRPRSRNPSAWTVEDVVWFVKDADPQA 362
            P SSP  +    +  R + +PS     D    ++  S++PS W+V++V+ F+K  DPQ 
Sbjct: 590 SPKSSP--HEVKFQMQRKSEAPSYIAVPDPSVLKQGFSKDPSTWSVDEVIQFMKHTDPQI 647

Query: 363 LGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQAKF 414
            GP  +LFR+HEIDG AL LLKSD++MKY+GLKLGPALKLCY+I+KLK+ K+
Sbjct: 648 SGPLADLFRQHEIDGKALFLLKSDVMMKYMGLKLGPALKLCYYIEKLKEGKY 699


>gi|71274154 Scm-like with four mbt domains 2 [Homo sapiens]
          Length = 894

 Score =  101 bits (251), Expect = 1e-21
 Identities = 99/398 (24%), Positives = 168/398 (42%), Gaps = 65/398 (16%)

Query: 71  PEPDLSSIPQDAATVPSLAAPQALT---VC--LYINKQANAGPYLERKKVQQLPEHFGPE 125
           P   +  IP D    P L     +     C  L+IN +  +GPYL + ++ +LP+  GP 
Sbjct: 499 PTVPVKKIPHDLCLFPHLDTTGTVNGKYCCPQLFINHRCFSGPYLNKGRIAELPQSVGPG 558

Query: 126 RPSAVLQQAVQACIDCAHQQKLVF---SLVKQGYGG-EMVSVSASFDGKQHLRSLPVVNS 181
           +   VL++ +   I+ A++   V     LV+  +   +  ++ A + GK +   + +V +
Sbjct: 559 KCVLVLKEVLSMIINAAYKPGRVLRELQLVEDPHWNFQEETLKAKYRGKTYRAVVKIVRT 618

Query: 182 IGYVLRFLAKLCRSL-LCDDLFS----HQPFPRGCSASEKVQ------------------ 218
              V  F  ++C  L  C +LFS     +  P  CS   K +                  
Sbjct: 619 SDQVANFCRRVCAKLECCPNLFSPVLISENCPENCSIHTKTKYTYYYGKRKKISKPPIGE 678

Query: 219 -------EKEEGRMESVKTVTTEEYLVNPV-----GMNRYSVDTSASTFNHRGSLHPSSS 266
                   K   R +  K++  ++   +       G    S +  A   +   +   + S
Sbjct: 679 SNPDSGHPKPARRRKRRKSIFVQKKRRSSAVDFTAGSGEESEEEDADAMDDDTASEETGS 738

Query: 267 LYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRN------TTSLE 320
               R +  D+     P+A    PR +     G S P  RPP    +R       +++ E
Sbjct: 739 EL--RDDQTDTSSAEVPSAR---PRRAVTLRSG-SEPVRRPPPERTRRGRGAPAASSAEE 792

Query: 321 GNRCASSPSQDAQDARRPRSR------NPSAWTVEDVVWFVKDADPQALGPHVELFRKHE 374
           G +C  +  +  +D ++          NP  WTV DVV F+K  D     P  ++F++ +
Sbjct: 793 GEKCPPTKPEGTEDTKQEEEERLVLESNPLEWTVTDVVRFIKLTD---CAPLAKIFQEQD 849

Query: 375 IDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQA 412
           IDG ALLLL    V + + LKLGPA+KLC+ I+++K A
Sbjct: 850 IDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVKVA 887


>gi|82830432 sex comb on midleg-like 1 isoform a [Homo sapiens]
          Length = 329

 Score =  100 bits (250), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)

Query: 340 SRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPA 399
           +++PS W+VE VV F+K  DP AL P V+LFR HEIDG ALLLL SD+++K+LG+KLG A
Sbjct: 252 TKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTA 311

Query: 400 LKLCYHIDKLKQAK 413
           +KLCY+ID+LKQ K
Sbjct: 312 VKLCYYIDRLKQGK 325


>gi|82830436 sex comb on midleg-like 1 isoform c [Homo sapiens]
          Length = 208

 Score =  100 bits (250), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)

Query: 340 SRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPA 399
           +++PS W+VE VV F+K  DP AL P V+LFR HEIDG ALLLL SD+++K+LG+KLG A
Sbjct: 131 TKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTA 190

Query: 400 LKLCYHIDKLKQAK 413
           +KLCY+ID+LKQ K
Sbjct: 191 VKLCYYIDRLKQGK 204


>gi|82830430 sex comb on midleg-like 1 isoform c [Homo sapiens]
          Length = 208

 Score =  100 bits (250), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)

Query: 340 SRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPA 399
           +++PS W+VE VV F+K  DP AL P V+LFR HEIDG ALLLL SD+++K+LG+KLG A
Sbjct: 131 TKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTA 190

Query: 400 LKLCYHIDKLKQAK 413
           +KLCY+ID+LKQ K
Sbjct: 191 VKLCYYIDRLKQGK 204


>gi|82830426 sex comb on midleg-like 1 isoform b [Homo sapiens]
          Length = 302

 Score =  100 bits (250), Expect = 2e-21
 Identities = 47/74 (63%), Positives = 61/74 (82%)

Query: 340 SRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPA 399
           +++PS W+VE VV F+K  DP AL P V+LFR HEIDG ALLLL SD+++K+LG+KLG A
Sbjct: 225 TKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTA 284

Query: 400 LKLCYHIDKLKQAK 413
           +KLCY+ID+LKQ K
Sbjct: 285 VKLCYYIDRLKQGK 298


>gi|53692193 Scm-like with four mbt domains 1 [Homo sapiens]
          Length = 866

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 87/361 (24%), Positives = 149/361 (41%), Gaps = 52/361 (14%)

Query: 98  LYINKQANAGPYLERKKVQQLPEHFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQG-- 155
           +Y N +  +GPYL + ++ +LP+  GP     VL++ +   I+ A++   V   ++    
Sbjct: 505 IYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKD 564

Query: 156 --YGGEMVSVSASFDGKQHLRSLPVVNSIGYVLRFLAKLCRSL-LCDDLFSHQPFPRGCS 212
             + G    + A + GK +  ++ +V +   V  F  + C  L  C +LF  +     CS
Sbjct: 565 SVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCS 624

Query: 213 ASEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQ 272
            +  V  K +      K     + +  P G    ++  +    + R     +  ++ K++
Sbjct: 625 ENCSVLTKTKYTHYYGKK--KNKRIGRPPG-GHSNLACALKKASKRRKRRKNVFVHKKKR 681

Query: 273 NSG--DSHLGGGPAATAGGPRTSPMSSGGPS-APGLRPPASSPKRNTTSL-EGNRCASSP 328
           +S   D+   G P  + G     P      S + G         +  + + E   C+SSP
Sbjct: 682 SSASVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSP 741

Query: 329 SQD----------------------AQDARRPRS---------------RNPSAWTVEDV 351
           +Q                       + D  +P S                NP  W+V DV
Sbjct: 742 TQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDSNPLKWSVADV 801

Query: 352 VWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQ 411
           V F++  D     P   +F   EIDG ALLLL    V + + LKLGPA+KLC+HI+++K 
Sbjct: 802 VRFIRSTD---CAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKF 858

Query: 412 A 412
           A
Sbjct: 859 A 859


>gi|53692191 Scm-like with four mbt domains 1 [Homo sapiens]
          Length = 866

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 87/361 (24%), Positives = 149/361 (41%), Gaps = 52/361 (14%)

Query: 98  LYINKQANAGPYLERKKVQQLPEHFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQG-- 155
           +Y N +  +GPYL + ++ +LP+  GP     VL++ +   I+ A++   V   ++    
Sbjct: 505 IYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKD 564

Query: 156 --YGGEMVSVSASFDGKQHLRSLPVVNSIGYVLRFLAKLCRSL-LCDDLFSHQPFPRGCS 212
             + G    + A + GK +  ++ +V +   V  F  + C  L  C +LF  +     CS
Sbjct: 565 SVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCS 624

Query: 213 ASEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQ 272
            +  V  K +      K     + +  P G    ++  +    + R     +  ++ K++
Sbjct: 625 ENCSVLTKTKYTHYYGKK--KNKRIGRPPG-GHSNLACALKKASKRRKRRKNVFVHKKKR 681

Query: 273 NSG--DSHLGGGPAATAGGPRTSPMSSGGPS-APGLRPPASSPKRNTTSL-EGNRCASSP 328
           +S   D+   G P  + G     P      S + G         +  + + E   C+SSP
Sbjct: 682 SSASVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSP 741

Query: 329 SQD----------------------AQDARRPRS---------------RNPSAWTVEDV 351
           +Q                       + D  +P S                NP  W+V DV
Sbjct: 742 TQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDSNPLKWSVADV 801

Query: 352 VWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQ 411
           V F++  D     P   +F   EIDG ALLLL    V + + LKLGPA+KLC+HI+++K 
Sbjct: 802 VRFIRSTD---CAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKF 858

Query: 412 A 412
           A
Sbjct: 859 A 859


>gi|53692195 Scm-like with four mbt domains 1 [Homo sapiens]
          Length = 866

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 87/361 (24%), Positives = 149/361 (41%), Gaps = 52/361 (14%)

Query: 98  LYINKQANAGPYLERKKVQQLPEHFGPERPSAVLQQAVQACIDCAHQQKLVFSLVKQG-- 155
           +Y N +  +GPYL + ++ +LP+  GP     VL++ +   I+ A++   V   ++    
Sbjct: 505 IYFNHRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKD 564

Query: 156 --YGGEMVSVSASFDGKQHLRSLPVVNSIGYVLRFLAKLCRSL-LCDDLFSHQPFPRGCS 212
             + G    + A + GK +  ++ +V +   V  F  + C  L  C +LF  +     CS
Sbjct: 565 SVWHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCS 624

Query: 213 ASEKVQEKEEGRMESVKTVTTEEYLVNPVGMNRYSVDTSASTFNHRGSLHPSSSLYCKRQ 272
            +  V  K +      K     + +  P G    ++  +    + R     +  ++ K++
Sbjct: 625 ENCSVLTKTKYTHYYGKK--KNKRIGRPPG-GHSNLACALKKASKRRKRRKNVFVHKKKR 681

Query: 273 NSG--DSHLGGGPAATAGGPRTSPMSSGGPS-APGLRPPASSPKRNTTSL-EGNRCASSP 328
           +S   D+   G P  + G     P      S + G         +  + + E   C+SSP
Sbjct: 682 SSASVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSSP 741

Query: 329 SQD----------------------AQDARRPRS---------------RNPSAWTVEDV 351
           +Q                       + D  +P S                NP  W+V DV
Sbjct: 742 TQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDSNPLKWSVADV 801

Query: 352 VWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQ 411
           V F++  D     P   +F   EIDG ALLLL    V + + LKLGPA+KLC+HI+++K 
Sbjct: 802 VRFIRSTD---CAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERIKF 858

Query: 412 A 412
           A
Sbjct: 859 A 859


>gi|62953127 polyhomeotic 1-like [Homo sapiens]
          Length = 1004

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 7/149 (4%)

Query: 264  SSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRNTTSLEGNR 323
            SSS   + +  G  H G   ++  G   +S   +  P++PG   P S    +     GN 
Sbjct: 861  SSSDIARAKIQGKCHRGQEDSSR-GSDNSSYDEALSPTSPG---PLSVRAGHGERDLGNP 916

Query: 324  CASSPSQDAQDARRP-RSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLL 382
              + P+ +         S NPS W+VE+V  F+  A  Q      E FR  EIDG ALLL
Sbjct: 917  NTAPPTPELHGINPVFLSSNPSRWSVEEVYEFI--ASLQGCQEIAEEFRSQEIDGQALLL 974

Query: 383  LKSDMVMKYLGLKLGPALKLCYHIDKLKQ 411
            LK + +M  + +KLGPALK+C  I+ LK+
Sbjct: 975  LKEEHLMSAMNIKLGPALKICAKINVLKE 1003


>gi|148612879 polyhomeotic like 3 [Homo sapiens]
          Length = 995

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 42/113 (37%), Positives = 53/113 (46%), Gaps = 4/113 (3%)

Query: 300 PSAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDAD 359
           PSA   R    S +     L   R    P     D        PS WTV+DV  F+    
Sbjct: 887 PSAMTTRLRRQSERERERELRDVRIRKMPENS--DLLPVAQTEPSIWTVDDVWAFIHSLP 944

Query: 360 PQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQA 412
                   + FR  EIDG ALLLLK D +M  + +KLGPALK+C  I+ LK++
Sbjct: 945 --GCQDIADEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKICARINSLKES 995


>gi|37595530 polyhomeotic-like 2 isoform b [Homo sapiens]
          Length = 323

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 308 PASSPKRNTTSLEGNRCASSPSQDAQD----ARRPRSRNPSAWTVEDVVWFVKDADPQAL 363
           P S+    +   +G R    P    +D            P+ W VEDV  F++       
Sbjct: 217 PISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLP--GC 274

Query: 364 GPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQA 412
               E FR  EIDG ALLLLK D +M  + +KLGPALK+   I  LK +
Sbjct: 275 QEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKDS 323


>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
          Length = 858

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 6/109 (5%)

Query: 308 PASSPKRNTTSLEGNRCASSPSQDAQD----ARRPRSRNPSAWTVEDVVWFVKDADPQAL 363
           P S+    +   +G R    P    +D            P+ W VEDV  F++       
Sbjct: 752 PISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLP--GC 809

Query: 364 GPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLCYHIDKLKQA 412
               E FR  EIDG ALLLLK D +M  + +KLGPALK+   I  LK +
Sbjct: 810 QEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKDS 858



 Score = 29.3 bits (64), Expect = 6.9
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 6   IPGRKRGRPSLHSTPMKMAVHNLYSASAGSLPAVKI---PKKRGRKPGYKIKSRVLMTPL 62
           +PG   GR  L  T   +A H L + +   L   ++   P  +  +P + I+ +      
Sbjct: 300 VPGSMEGRAGLSRTVPAVAAHPLIAPAYAQLQPHQLLPQPSSKHLQPQFVIQQQPQPQQQ 359

Query: 63  ALSPPRSTPEPDLSSIPQDAATVPSLA 89
              P +S P       PQ A+  PS+A
Sbjct: 360 QPPPQQSRPVLQAEPHPQLASVSPSVA 386


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 27/138 (19%)

Query: 281 GGPAATAGGPRTS---PMSSGGPSAPGLRPPASSPKRNTTSLEGNRCASSPSQDAQDARR 337
           GG A+ A GP +    P+  G P+ PG               +G      P       R+
Sbjct: 414 GGTASVATGPDSPSPVPLPPGKPALPGA--------------DGTPFGCPPG------RK 453

Query: 338 PRSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLG 397
            +  +P  WTV DVV +  +A           F++ EIDG +LLL++   V+  L ++LG
Sbjct: 454 EKPSDPVEWTVMDVVEYFTEA---GFPEQATAFQEQEIDGKSLLLMQRTDVLTGLSIRLG 510

Query: 398 PALKLC-YHIDKLKQAKF 414
           PALK+  +HI  L+Q  F
Sbjct: 511 PALKIYEHHIKVLQQGHF 528


>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
          Length = 681

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 264 SSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRNTTSLEGNR 323
           ++++ C+    G +  GG   A A G    P    G + P   P A SP  +T ++ G  
Sbjct: 476 TAAVGCRGPTPGQAPAGG---AGAEGKGLFP----GSTLPLGFPYAVSPYFHTGAVGGL- 527

Query: 324 CASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLL 383
                S D ++A  P   + + WTV+DV  FV        G +  +FR+  IDG  L LL
Sbjct: 528 -----SMDGEEA--PAPEDVTKWTVDDVCSFVGGLS--GCGEYTRVFREQGIDGETLPLL 578

Query: 384 KSDMVMKYLGLKLGPALKL 402
             + ++  +GLKLGPALK+
Sbjct: 579 TEEHLLTNMGLKLGPALKI 597


>gi|158138528 l(3)mbt-like 4 [Homo sapiens]
          Length = 623

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)

Query: 339 RSRNPSAWTVEDVVWFVKDADPQALG--PHVELFRKHEIDGNALLLLKSDMVMKYLGLKL 396
           R+   + WTV++V  FV+      LG   H + F+K +IDG A LLL    ++K + +KL
Sbjct: 536 RASQVARWTVDEVAEFVQSL----LGCEEHAKCFKKEQIDGKAFLLLTQTDIVKVMKIKL 591

Query: 397 GPALKL 402
           GPALK+
Sbjct: 592 GPALKI 597


>gi|58293756 sterile alpha motif domain containing 13 isoform 1
           [Homo sapiens]
          Length = 116

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 305 LRPPASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNPSAWTVEDVVWFVKDADPQALG 364
           ++ P S P  +   +E     S   +++ +  RP   +P+ W V DVV + +        
Sbjct: 7   VKEPCSLPMLSV-DMENKENGSVGVKNSMENGRPP--DPADWAVMDVVNYFRTV---GFE 60

Query: 365 PHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLC-YHIDKLK 410
                F++ EIDG +LLL+  + V+  L LKLGPALK+  YH+  L+
Sbjct: 61  EQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGPALKIYEYHVKPLQ 107


>gi|197927257 sterile alpha motif domain containing 13 isoform 2
           [Homo sapiens]
          Length = 102

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 339 RSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGP 398
           R  +P+ W V DVV + +             F++ EIDG +LLL+  + V+  L LKLGP
Sbjct: 24  RPPDPADWAVMDVVNYFRTV---GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGP 80

Query: 399 ALKLC-YHIDKLK 410
           ALK+  YH+  L+
Sbjct: 81  ALKIYEYHVKPLQ 93


>gi|197927255 sterile alpha motif domain containing 13 isoform 2
           [Homo sapiens]
          Length = 102

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 339 RSRNPSAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGP 398
           R  +P+ W V DVV + +             F++ EIDG +LLL+  + V+  L LKLGP
Sbjct: 24  RPPDPADWAVMDVVNYFRTV---GFEEQASAFQEQEIDGKSLLLMTRNDVLTGLQLKLGP 80

Query: 399 ALKLC-YHIDKLK 410
           ALK+  YH+  L+
Sbjct: 81  ALKIYEYHVKPLQ 93


>gi|32699038 sterile alpha motif domain containing 7 [Homo sapiens]
          Length = 446

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 346 WTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKL 402
           WTV+DV  F++         + ++F+ H IDG  L LL  + +   +GLKLGPALK+
Sbjct: 327 WTVDDVHSFIRSLP--GCSDYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLGPALKI 381


>gi|55770872 l(3)mbt-like 3 isoform b [Homo sapiens]
          Length = 755

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 344 SAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLC 403
           S W+ ++V  F++         H ++F+  +IDG A LL+    ++K + +KLGPALK+ 
Sbjct: 681 SKWSTDEVSEFIQSLP--GCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIF 738

Query: 404 YHIDKLKQAK 413
             I   K A+
Sbjct: 739 NSILMFKAAE 748


>gi|55770870 l(3)mbt-like 3 isoform a [Homo sapiens]
          Length = 780

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 344 SAWTVEDVVWFVKDADPQALGPHVELFRKHEIDGNALLLLKSDMVMKYLGLKLGPALKLC 403
           S W+ ++V  F++         H ++F+  +IDG A LL+    ++K + +KLGPALK+ 
Sbjct: 706 SKWSTDEVSEFIQSLP--GCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIF 763

Query: 404 YHIDKLKQAK 413
             I   K A+
Sbjct: 764 NSILMFKAAE 773


>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 282 GPAATAGGPRTSPMSSG---GPSAPGLRPPAS-------SPKRNTTSLEGNRCASSPSQD 331
           GP A  GG R +PM S    GP+ P LR P+S       +P  + +        +SPS+ 
Sbjct: 75  GPRAARGGARAAPMPSSAPRGPTEPALRRPSSAERPLAQAPSSSASVGRAPGAMASPSRS 134

Query: 332 AQDARRPRSRNPSAWTVEDVV 352
           ++   +PR R+      ED V
Sbjct: 135 SEATGKPRGRDGRPRREEDDV 155


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 13  RPSLHSTPMKMAVHNLYSASA--GSLP---------AVKIPKKRGRKPGYKIKSRVLMTP 61
           +P  HSTP  +  H + S  A   +LP         A  +P K  R P   +   +  TP
Sbjct: 841 QPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPA--VSPALTQTP 898

Query: 62  LALSPPRSTPEPDLSSIPQDAATVPSLAAPQALTVCLYINKQANAGPYLERKKVQQLPEH 121
           L   PP + P   L  +  +    P L + Q       + K     P L   KVQ  P  
Sbjct: 899 LLPQPPMAQPPQVL--LEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPP 956

Query: 122 FGPERPSAVLQQAVQ 136
             P  P   +QQ +Q
Sbjct: 957 PLPPPPHPSVQQQLQ 971


>gi|157909822 pragmin [Homo sapiens]
          Length = 1402

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 13/79 (16%)

Query: 274 SGDSHLGGGPAATAGGPRTSPMS-----SGGPSAPGLRPPASSPKRNTTSLEGN------ 322
           S  S +G   + +AGGP  SP++     S G S+ G +PP+  P     S   N      
Sbjct: 547 SKSSPVGSPVSPSAGGPPVSPLADLSDGSSGGSSIGPQPPSQGPADPAPSCRTNGVAISD 606

Query: 323 --RCASSPSQDAQDARRPR 339
             RC    +  A + RRPR
Sbjct: 607 PSRCPQPAASSASEQRRPR 625


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 31/91 (34%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 254 TFNHRGSLHP---SSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPAS 310
           TF  R SL P   SSSL  K    G    GGG  A +G    + +   GP  PG   P  
Sbjct: 246 TFKSRPSLAPPAASSSLAAKASLGGGG--GGGLFAASGAISYAEVLKQGPLPPGAARPLG 303

Query: 311 SPKRNTTSLE-----GNRCASSPSQDAQDAR 336
              R     E     G  C+  PS  A  AR
Sbjct: 304 EVSRGAQEAEGGDGDGEGCSGPPSAPASQAR 334


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 15/84 (17%)

Query: 277  SHLGGGPAATAGGPRTSPMSSGGPSAPGLRPPASSPKRN--------------TTSLEGN 322
            S     P    G PRT    S   S+PGLR  + +P R+              T S   +
Sbjct: 1419 SSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRS 1478

Query: 323  RCASSPSQDA-QDARRPRSRNPSA 345
             C SSP   A     RPRSR+PS+
Sbjct: 1479 ECDSSPEPKALPQTPRPRSRSPSS 1502



 Score = 32.3 bits (72), Expect = 0.81
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 247  SVDTSASTFNHRGSLHPSSSLYCKRQNSGDSHLGGGPAATAGGPRTSPMSSGGPSAPGLR 306
            S  +S+S+ +   S   SSS      +S  S     P+    GP+  P     P++P   
Sbjct: 2613 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK----PASPKKP 2668

Query: 307  PPAS----SPKRNTTSLEGNRCAS-SPSQDAQDARRPRSRNPSAWTVE 349
            PP      SP++   SL  +R  S SP +  + + +P  R+  + + E
Sbjct: 2669 PPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSE 2716



 Score = 29.3 bits (64), Expect = 6.9
 Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 14/95 (14%)

Query: 263  PSSSLYCKRQNSGDSHLGGGP-----AATAGGPRTSP---------MSSGGPSAPGLRPP 308
            P+     +R  SG S  G GP     ++T   P   P          SS  P      PP
Sbjct: 1627 PAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPP 1686

Query: 309  ASSPKRNTTSLEGNRCASSPSQDAQDARRPRSRNP 343
                 R++  L      S  S+ A  +   RSR P
Sbjct: 1687 RRRSSRSSPELTRKARLSRRSRSASSSPETRSRTP 1721


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,876,915
Number of Sequences: 37866
Number of extensions: 1022044
Number of successful extensions: 7154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 6686
Number of HSP's gapped (non-prelim): 686
length of query: 414
length of database: 18,247,518
effective HSP length: 105
effective length of query: 309
effective length of database: 14,271,588
effective search space: 4409920692
effective search space used: 4409920692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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